RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 E9PCH4 1651 aa20.7■□□□□ 0.9
CXCL12-205ENST00000395794 PIP4K2BP78356 416 aa20.69■□□□□ 0.9
CXCL12-205ENST00000395794 NAIPQ13075 1403 aa20.69■□□□□ 0.9
CXCL12-205ENST00000395794 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.68■□□□□ 0.9
CXCL12-205ENST00000395794 SLC26A8Q96RN1 970 aa20.68■□□□□ 0.9
CXCL12-205ENST00000395794 TRIM52Q96A61 297 aa20.67■□□□□ 0.9
CXCL12-205ENST00000395794 RIMS2Q9UQ26 1411 aa20.66■□□□□ 0.9
CXCL12-205ENST00000395794 LRRC7Q96NW7 1537 aa20.66■□□□□ 0.9
CXCL12-205ENST00000395794 HFM1A2PYH4 1435 aa20.65■□□□□ 0.9
CXCL12-205ENST00000395794 TMEM131LA2VDJ0 1609 aa20.64■□□□□ 0.89
CXCL12-205ENST00000395794 KCNA6P17658 529 aa20.63■□□□□ 0.89
CXCL12-205ENST00000395794 ZFYVE9O95405 1425 aa20.62■□□□□ 0.89
CXCL12-205ENST00000395794 PLEKHG1Q9ULL1 1385 aa20.62■□□□□ 0.89
CXCL12-205ENST00000395794 STRCP1A6NGW2 1772 aa20.61■□□□□ 0.89
CXCL12-205ENST00000395794 NUTM2DQ5VT03 806 aaPredicted RBP20.59■□□□□ 0.89
CXCL12-205ENST00000395794 PROSER2Q86WR7 435 aaPredicted RBP20.59■□□□□ 0.89
CXCL12-205ENST00000395794 ZNF326Q5BKZ1 582 aaKnown RBP20.58■□□□□ 0.89
CXCL12-205ENST00000395794 SLC4A1APQ9BWU0 796 aaKnown RBP20.58■□□□□ 0.89
CXCL12-205ENST00000395794 TBX22Q9Y458 520 aa20.57■□□□□ 0.88
CXCL12-205ENST00000395794 DISP3Q9P2K9 1392 aa20.57■□□□□ 0.88
CXCL12-205ENST00000395794 MYO5BQ9ULV0 1848 aa20.56■□□□□ 0.88
CXCL12-205ENST00000395794 HSPA1LP34931 641 aa20.56■□□□□ 0.88
CXCL12-205ENST00000395794 TMEM94Q12767 1356 aa20.55■□□□□ 0.88
CXCL12-205ENST00000395794 SPHKAPQ2M3C7 1700 aa20.55■□□□□ 0.88
CXCL12-205ENST00000395794 NKTRP30414 1462 aaKnown RBP20.52■□□□□ 0.88
CXCL12-205ENST00000395794 TRPM2O94759 1503 aa20.51■□□□□ 0.87
CXCL12-205ENST00000395794 RBM33Q96EV2 1170 aaKnown RBP20.5■□□□□ 0.87
CXCL12-205ENST00000395794 ACIN1Q9UKV3 1341 aaKnown RBP20.5■□□□□ 0.87
CXCL12-205ENST00000395794 PIK3R4Q99570 1358 aa20.48■□□□□ 0.87
CXCL12-205ENST00000395794 NWD1Q149M9 1564 aa20.48■□□□□ 0.87
CXCL12-205ENST00000395794 ALKQ9UM73 1620 aa20.48■□□□□ 0.87
CXCL12-205ENST00000395794 MSH6P52701 1360 aa20.47■□□□□ 0.87
CXCL12-205ENST00000395794 DIP2AQ14689 1571 aa20.47■□□□□ 0.87
CXCL12-205ENST00000395794 ADAMTS13Q76LX8 1427 aa20.47■□□□□ 0.87
CXCL12-205ENST00000395794 C14orf37Q86TY3 774 aa20.47■□□□□ 0.87
CXCL12-205ENST00000395794 CLTCL1P53675 1640 aa20.45■□□□□ 0.87
CXCL12-205ENST00000395794 MPHOSPH9Q99550 1183 aa20.44■□□□□ 0.86
CXCL12-205ENST00000395794 VGFO15240 615 aaPredicted RBP20.43■□□□□ 0.86
CXCL12-205ENST00000395794 AMOTL2Q9Y2J4 779 aa20.43■□□□□ 0.86
CXCL12-205ENST00000395794 XIRP1Q702N8 1843 aaKnown RBP20.43■□□□□ 0.86
CXCL12-205ENST00000395794 CHD2O14647 1828 aaKnown RBP20.42■□□□□ 0.86
CXCL12-205ENST00000395794 RPGRIP1LQ68CZ1 1315 aa20.41■□□□□ 0.86
CXCL12-205ENST00000395794 FAM135BQ49AJ0 1406 aa20.41■□□□□ 0.86
CXCL12-205ENST00000395794 SETD5Q9C0A6 1442 aa20.41■□□□□ 0.86
CXCL12-205ENST00000395794 NCOA3Q9Y6Q9 1424 aa20.41■□□□□ 0.86
CXCL12-205ENST00000395794 KIF1BO60333 1816 aa20.41■□□□□ 0.86
CXCL12-205ENST00000395794 SLAIN2Q9P270 581 aa20.4■□□□□ 0.86
CXCL12-205ENST00000395794 SETBP1Q9Y6X0 1596 aa20.39■□□□□ 0.85
CXCL12-205ENST00000395794 NEXMIFQ5QGS0 1516 aa20.38■□□□□ 0.85
CXCL12-205ENST00000395794 CCDC144AA2RUR9 1427 aa20.38■□□□□ 0.85
CXCL12-205ENST00000395794 ATF3P18847 181 aa20.38■□□□□ 0.85
CXCL12-205ENST00000395794 C19orf44Q9H6X5 657 aa20.38■□□□□ 0.85
CXCL12-205ENST00000395794 CADPS2Q86UW7 1296 aa20.36■□□□□ 0.85
CXCL12-205ENST00000395794 PTPRUQ92729 1446 aa20.35■□□□□ 0.85
CXCL12-205ENST00000395794 METP08581 1390 aa20.34■□□□□ 0.85
CXCL12-205ENST00000395794 NRXN3Q9Y4C0 1643 aa20.33■□□□□ 0.84
CXCL12-205ENST00000395794 RGL3Q3MIN7 710 aa20.32■□□□□ 0.84
CXCL12-205ENST00000395794 RAB3GAP2Q9H2M9 1393 aa20.32■□□□□ 0.84
CXCL12-205ENST00000395794 ILDR2Q71H61 639 aa20.31■□□□□ 0.84
CXCL12-205ENST00000395794 MED1Q15648 1581 aaPredicted RBP20.3■□□□□ 0.84
CXCL12-205ENST00000395794 ROBO1Q9Y6N7 1651 aa20.3■□□□□ 0.84
CXCL12-205ENST00000395794 XRN1Q8IZH2 1706 aaKnown RBP20.27■□□□□ 0.83
CXCL12-205ENST00000395794 ANKRD30BQ9BXX2 1392 aa20.26■□□□□ 0.83
CXCL12-205ENST00000395794 DCCP43146 1447 aa20.25■□□□□ 0.83
CXCL12-205ENST00000395794 SPATA31E1Q6ZUB1 1445 aa20.25■□□□□ 0.83
CXCL12-205ENST00000395794 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.24■□□□□ 0.83
CXCL12-205ENST00000395794 PPLO60437 1756 aa20.23■□□□□ 0.83
CXCL12-205ENST00000395794 ADGRF5Q8IZF2 1346 aa20.23■□□□□ 0.83
CXCL12-205ENST00000395794 HRCP23327 699 aa20.22■□□□□ 0.83
CXCL12-205ENST00000395794 SOCS7O14512 581 aa20.21■□□□□ 0.83
CXCL12-205ENST00000395794 ADGRL3Q9HAR2 1447 aa20.2■□□□□ 0.82
CXCL12-205ENST00000395794 PTCH1Q13635 1447 aa20.19■□□□□ 0.82
CXCL12-205ENST00000395794 JCADQ9P266 1359 aa20.19■□□□□ 0.82
CXCL12-205ENST00000395794 PHLPP1O60346 1717 aa20.19■□□□□ 0.82
CXCL12-205ENST00000395794 BRINP3Q76B58 766 aa20.18■□□□□ 0.82
CXCL12-205ENST00000395794 ROBO2Q9HCK4 1378 aa20.18■□□□□ 0.82
CXCL12-205ENST00000395794 STK26Q9P289 416 aa20.16■□□□□ 0.82
CXCL12-205ENST00000395794 MST1RQ04912 1400 aa20.15■□□□□ 0.82
CXCL12-205ENST00000395794 SETD1AO15047 1707 aaKnown RBP20.15■□□□□ 0.82
CXCL12-205ENST00000395794 PRAG1Q86YV5 1406 aa20.14■□□□□ 0.81
CXCL12-205ENST00000395794 PIK3C2GO75747 1445 aa20.13■□□□□ 0.81
CXCL12-205ENST00000395794 TMEM132EQ6IEE7 984 aa20.12■□□□□ 0.81
CXCL12-205ENST00000395794 AHDC1Q5TGY3 1603 aaPredicted RBP20.12■□□□□ 0.81
CXCL12-205ENST00000395794 ASXL1Q8IXJ9 1541 aa20.12■□□□□ 0.81
CXCL12-205ENST00000395794 LRPPRCP42704 1394 aaKnown RBP20.11■□□□□ 0.81
CXCL12-205ENST00000395794 IFT172Q9UG01 1749 aa20.11■□□□□ 0.81
CXCL12-205ENST00000395794 NALCNQ8IZF0 1738 aa20.1■□□□□ 0.81
CXCL12-205ENST00000395794 COL16A1Q07092 1604 aaPredicted RBP20.1■□□□□ 0.81
CXCL12-205ENST00000395794 SPATA31A6Q5VVP1 1343 aa20.1■□□□□ 0.81
CXCL12-205ENST00000395794 C14orf93Q9H972 538 aaKnown RBP20.1■□□□□ 0.81
CXCL12-205ENST00000395794 ABCC11Q96J66 1382 aa20.09■□□□□ 0.81
CXCL12-205ENST00000395794 MEX3CQ5U5Q3 659 aaKnown RBP20.09■□□□□ 0.81
CXCL12-205ENST00000395794 MYOM2P54296 1465 aa20.08■□□□□ 0.81
CXCL12-205ENST00000395794 C1orf167Q5SNV9 1468 aa20.08■□□□□ 0.81
CXCL12-205ENST00000395794 LRRC59Q96AG4 307 aaKnown RBP20.08■□□□□ 0.81
CXCL12-205ENST00000395794 DHX57Q6P158 1386 aaKnown RBP20.08■□□□□ 0.8
CXCL12-205ENST00000395794 CFAP70Q5T0N1 1121 aa20.07■□□□□ 0.8
CXCL12-205ENST00000395794 WAPLQ7Z5K2 1190 aa20.07■□□□□ 0.8
CXCL12-205ENST00000395794 TECPR2O15040 1411 aa20.07■□□□□ 0.8
CXCL12-205ENST00000395794 STAC3Q96MF2 364 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms