RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 PLCH2O75038 1416 aa14.94□□□□□ -0.02
UBE2D3-209ENST00000394804 PMFBP1Q8TBY8 1022 aa14.94□□□□□ -0.02
UBE2D3-209ENST00000394804 ARHGEF12Q9NZN5 1544 aa14.93□□□□□ -0.02
UBE2D3-209ENST00000394804 SLC4A3P48751 1232 aa14.93□□□□□ -0.02
UBE2D3-209ENST00000394804 ADGRL2O95490 1459 aa14.93□□□□□ -0.02
UBE2D3-209ENST00000394804 KIF13AQ9H1H9 1805 aa14.93□□□□□ -0.02
UBE2D3-209ENST00000394804 MYH16Q9H6N6 1097 aa14.92□□□□□ -0.02
UBE2D3-209ENST00000394804 UHRF1BP1Q6BDS2 1440 aa14.92□□□□□ -0.02
UBE2D3-209ENST00000394804 GGT6Q6P531 493 aa14.92□□□□□ -0.02
UBE2D3-209ENST00000394804 U2AF1L5P0DN76 240 aaPredicted RBP14.92□□□□□ -0.02
UBE2D3-209ENST00000394804 U2AF1Q01081 240 aaKnown RBP eCLIP14.92□□□□□ -0.022e-12■□□□□ 11.1
UBE2D3-209ENST00000394804 RWDD1Q9H446 243 aaPredicted RBP14.91□□□□□ -0.02
UBE2D3-209ENST00000394804 SCAPERQ9BY12 1400 aa14.9□□□□□ -0.02
UBE2D3-209ENST00000394804 SHANK2Q9UPX8 1470 aa14.9□□□□□ -0.02
UBE2D3-209ENST00000394804 ABCA9Q8IUA7 1624 aa14.9□□□□□ -0.02
UBE2D3-209ENST00000394804 RNF123Q5XPI4 1314 aa14.9□□□□□ -0.02
UBE2D3-209ENST00000394804 TRAK1Q9UPV9 953 aa14.89□□□□□ -0.03
UBE2D3-209ENST00000394804 PARD3Q8TEW0 1356 aa14.89□□□□□ -0.03
UBE2D3-209ENST00000394804 POGKQ9P215 609 aa14.88□□□□□ -0.03
UBE2D3-209ENST00000394804 ADGRL1O94910 1474 aa14.88□□□□□ -0.03
UBE2D3-209ENST00000394804 GLI2P10070 1586 aa14.88□□□□□ -0.03
UBE2D3-209ENST00000394804 COG6Q9Y2V7 657 aa14.88□□□□□ -0.03
UBE2D3-209ENST00000394804 GSE1Q14687 1217 aa14.88□□□□□ -0.03
UBE2D3-209ENST00000394804 RRP7AQ9Y3A4 280 aaKnown RBP14.88□□□□□ -0.03
UBE2D3-209ENST00000394804 SRPK2P78362 688 aaKnown RBP14.88□□□□□ -0.03
UBE2D3-209ENST00000394804 SLKQ9H2G2 1235 aaPredicted RBP14.88□□□□□ -0.03
UBE2D3-209ENST00000394804 DENND4BO75064 1496 aaPredicted RBP14.87□□□□□ -0.03
UBE2D3-209ENST00000394804 PRAG1Q86YV5 1406 aa14.87□□□□□ -0.03
UBE2D3-209ENST00000394804 LRPPRCP42704 1394 aaKnown RBP14.87□□□□□ -0.03
UBE2D3-209ENST00000394804 PNNQ9H307 717 aaKnown RBP14.87□□□□□ -0.03
UBE2D3-209ENST00000394804 SAFB2Q14151 953 aaKnown RBP eCLIP14.87□□□□□ -0.03
UBE2D3-209ENST00000394804 ANP32BQ92688 251 aaKnown RBP14.87□□□□□ -0.03
UBE2D3-209ENST00000394804 CLUAP1Q96AJ1 413 aa14.87□□□□□ -0.03
UBE2D3-209ENST00000394804 DISP3Q9P2K9 1392 aa14.86□□□□□ -0.03
UBE2D3-209ENST00000394804 MYO5CQ9NQX4 1742 aa14.86□□□□□ -0.03
UBE2D3-209ENST00000394804 MAP3K4Q9Y6R4 1608 aa14.86□□□□□ -0.03
UBE2D3-209ENST00000394804 ADGBQ8N7X0 1667 aa14.85□□□□□ -0.03
UBE2D3-209ENST00000394804 FAM135AQ9P2D6 1515 aa14.84□□□□□ -0.03
UBE2D3-209ENST00000394804 CFAP70Q5T0N1 1121 aa14.84□□□□□ -0.03
UBE2D3-209ENST00000394804 CDC42BPAQ5VT25 1732 aa14.84□□□□□ -0.03
UBE2D3-209ENST00000394804 NFKBIBQ15653 356 aa14.84□□□□□ -0.03
UBE2D3-209ENST00000394804 CHMP4BQ9H444 224 aaKnown RBP14.84□□□□□ -0.03
UBE2D3-209ENST00000394804 L1TD1Q5T7N2 865 aaKnown RBP14.83□□□□□ -0.04
UBE2D3-209ENST00000394804 SMC4Q9NTJ3 1288 aa14.83□□□□□ -0.04
UBE2D3-209ENST00000394804 COL17A1Q9UMD9 1497 aaPredicted RBP14.83□□□□□ -0.04
UBE2D3-209ENST00000394804 BCL2L13Q9BXK5 485 aa14.83□□□□□ -0.04
UBE2D3-209ENST00000394804 ESF1Q9H501 851 aaKnown RBP14.83□□□□□ -0.04
UBE2D3-209ENST00000394804 CDC42BPBQ9Y5S2 1711 aa14.83□□□□□ -0.04
UBE2D3-209ENST00000394804 HSCBQ8IWL3 235 aa14.82□□□□□ -0.04
UBE2D3-209ENST00000394804 TRAPPC8Q9Y2L5 1435 aa14.82□□□□□ -0.04
UBE2D3-209ENST00000394804 IPO8O15397 1037 aaKnown RBP14.82□□□□□ -0.04
UBE2D3-209ENST00000394804 C20orf194Q5TEA3 1177 aa14.82□□□□□ -0.04
UBE2D3-209ENST00000394804 RUNDC1Q96C34 613 aa14.82□□□□□ -0.04
UBE2D3-209ENST00000394804 STK26Q9P289 416 aa14.82□□□□□ -0.04
UBE2D3-209ENST00000394804 SYCP2Q9BX26 1530 aa14.82□□□□□ -0.04
UBE2D3-209ENST00000394804 ITPRIPQ8IWB1 547 aa14.81□□□□□ -0.04
UBE2D3-209ENST00000394804 PREX2Q70Z35 1606 aa14.81□□□□□ -0.04
UBE2D3-209ENST00000394804 SLFN5Q08AF3 891 aa14.81□□□□□ -0.04
UBE2D3-209ENST00000394804 PER1O15534 1290 aaPredicted RBP14.8□□□□□ -0.04
UBE2D3-209ENST00000394804 PDE3AQ14432 1141 aa14.8□□□□□ -0.04
UBE2D3-209ENST00000394804 SPRYD3Q8NCJ5 442 aa14.8□□□□□ -0.04
UBE2D3-209ENST00000394804 TESK2Q96S53 571 aa14.8□□□□□ -0.04
UBE2D3-209ENST00000394804 NEO1Q92859 1461 aa14.8□□□□□ -0.04
UBE2D3-209ENST00000394804 PANK1Q8TE04 598 aa14.8□□□□□ -0.04
UBE2D3-209ENST00000394804 KDM5CP41229 1560 aa14.79□□□□□ -0.04
UBE2D3-209ENST00000394804 BCAR3O75815 825 aa14.79□□□□□ -0.04
UBE2D3-209ENST00000394804 MLECQ14165 292 aa14.79□□□□□ -0.04
UBE2D3-209ENST00000394804 DUSP27Q5VZP5 1158 aa14.79□□□□□ -0.04
UBE2D3-209ENST00000394804 SAMD9LQ8IVG5 1584 aa14.79□□□□□ -0.04
UBE2D3-209ENST00000394804 AAMPQ13685 434 aa14.79□□□□□ -0.04
UBE2D3-209ENST00000394804 SKAP1Q86WV1 359 aa14.79□□□□□ -0.04
UBE2D3-209ENST00000394804 PPRC1Q5VV67 1664 aaKnown RBP14.78□□□□□ -0.04
UBE2D3-209ENST00000394804 EVC2Q86UK5 1308 aa14.78□□□□□ -0.04
UBE2D3-209ENST00000394804 GOLGA6L22H0YM25 854 aa14.78□□□□□ -0.04
UBE2D3-209ENST00000394804 HDGFL2Q7Z4V5 671 aaPredicted RBP14.78□□□□□ -0.04
UBE2D3-209ENST00000394804 ZKSCAN2Q63HK3 967 aa14.78□□□□□ -0.04
UBE2D3-209ENST00000394804 MBD5Q9P267 1494 aa14.78□□□□□ -0.04
UBE2D3-209ENST00000394804 HSP90AB1P08238 724 aaKnown RBP14.77□□□□□ -0.04
UBE2D3-209ENST00000394804 TERF2IPQ9NYB0 399 aa14.77□□□□□ -0.04
UBE2D3-209ENST00000394804 MFAP1P55081 439 aaKnown RBP14.77□□□□□ -0.05
UBE2D3-209ENST00000394804 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.05
UBE2D3-209ENST00000394804 NUTM2DQ5VT03 806 aaPredicted RBP14.76□□□□□ -0.05
UBE2D3-209ENST00000394804 NINLQ9Y2I6 1382 aa14.76□□□□□ -0.05
UBE2D3-209ENST00000394804 TCP11L2Q8N4U5 519 aa14.76□□□□□ -0.05
UBE2D3-209ENST00000394804 SCAF11Q99590 1463 aaKnown RBP14.75□□□□□ -0.05
UBE2D3-209ENST00000394804 TRIM44Q96DX7 344 aaPredicted RBP14.75□□□□□ -0.05
UBE2D3-209ENST00000394804 VGFO15240 615 aaPredicted RBP14.75□□□□□ -0.05
UBE2D3-209ENST00000394804 EIF2AK4Q9P2K8 1649 aaKnown RBP14.75□□□□□ -0.05
UBE2D3-209ENST00000394804 POGZQ7Z3K3 1410 aa14.74□□□□□ -0.05
UBE2D3-209ENST00000394804 ABCC1P33527 1531 aa14.73□□□□□ -0.05
UBE2D3-209ENST00000394804 MTHFSP49914 203 aa14.73□□□□□ -0.05
UBE2D3-209ENST00000394804 ZNF518AQ6AHZ1 1483 aa14.73□□□□□ -0.05
UBE2D3-209ENST00000394804 DUOX2Q9NRD8 1548 aa14.73□□□□□ -0.05
UBE2D3-209ENST00000394804 DZIP1LQ8IYY4 767 aaKnown RBP14.73□□□□□ -0.05
UBE2D3-209ENST00000394804 A2MP01023 1474 aa14.73□□□□□ -0.05
UBE2D3-209ENST00000394804 ARAP3Q8WWN8 1544 aa14.73□□□□□ -0.05
UBE2D3-209ENST00000394804 AMER1Q5JTC6 1135 aaPredicted RBP14.73□□□□□ -0.05
UBE2D3-209ENST00000394804 NKTRP30414 1462 aaKnown RBP14.72□□□□□ -0.05
UBE2D3-209ENST00000394804 GPRASP1Q5JY77 1395 aa14.72□□□□□ -0.05
UBE2D3-209ENST00000394804 CFAP74Q9C0B2 1584 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms