RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 MAP3K4Q9Y6R4 1608 aa20.7■□□□□ 0.9
UBE2D3-207ENST00000394801 NEO1Q92859 1461 aa20.69■□□□□ 0.9
UBE2D3-207ENST00000394801 UGGT1Q9NYU2 1555 aa20.69■□□□□ 0.9
UBE2D3-207ENST00000394801 CDCA8Q53HL2 280 aa20.68■□□□□ 0.9
UBE2D3-207ENST00000394801 PPP4R2Q9NY27 417 aa20.68■□□□□ 0.9
UBE2D3-207ENST00000394801 IFT172Q9UG01 1749 aa20.68■□□□□ 0.9
UBE2D3-207ENST00000394801 RNF123Q5XPI4 1314 aa20.67■□□□□ 0.9
UBE2D3-207ENST00000394801 INSRP06213 1382 aa20.67■□□□□ 0.9
UBE2D3-207ENST00000394801 NRXN1Q9ULB1 1477 aa20.66■□□□□ 0.9
UBE2D3-207ENST00000394801 EIF3AQ14152 1382 aaKnown RBP20.66■□□□□ 0.9
UBE2D3-207ENST00000394801 ZMYM4Q5VZL5 1548 aa20.65■□□□□ 0.9
UBE2D3-207ENST00000394801 SLC24A1O60721 1099 aa20.65■□□□□ 0.9
UBE2D3-207ENST00000394801 ANP32EQ9BTT0 268 aa20.64■□□□□ 0.89
UBE2D3-207ENST00000394801 SYNMO15061 1565 aa20.63■□□□□ 0.89
UBE2D3-207ENST00000394801 ABCA6Q8N139 1617 aa20.63■□□□□ 0.89
UBE2D3-207ENST00000394801 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
UBE2D3-207ENST00000394801 NPATQ14207 1427 aa20.63■□□□□ 0.89
UBE2D3-207ENST00000394801 ADGRB3O60242 1522 aa20.63■□□□□ 0.89
UBE2D3-207ENST00000394801 ADGRF5Q8IZF2 1346 aa20.63■□□□□ 0.89
UBE2D3-207ENST00000394801 MROH2AA6NES4 1674 aa20.62■□□□□ 0.89
UBE2D3-207ENST00000394801 CFAP70Q5T0N1 1121 aa20.61■□□□□ 0.89
UBE2D3-207ENST00000394801 ABCC3O15438 1527 aa20.59■□□□□ 0.89
UBE2D3-207ENST00000394801 GGT6Q6P531 493 aa20.58■□□□□ 0.89
UBE2D3-207ENST00000394801 AMER1Q5JTC6 1135 aaPredicted RBP20.58■□□□□ 0.88
UBE2D3-207ENST00000394801 KNSTRNQ9Y448 316 aa20.58■□□□□ 0.88
UBE2D3-207ENST00000394801 NPC1L1Q9UHC9 1359 aa20.57■□□□□ 0.88
UBE2D3-207ENST00000394801 MYOM1P52179 1685 aa20.57■□□□□ 0.88
UBE2D3-207ENST00000394801 PDE3BQ13370 1112 aa20.57■□□□□ 0.88
UBE2D3-207ENST00000394801 SETBP1Q9Y6X0 1596 aa20.56■□□□□ 0.88
UBE2D3-207ENST00000394801 BLMP54132 1417 aaPredicted RBP20.56■□□□□ 0.88
UBE2D3-207ENST00000394801 RAPGEF3O95398 923 aa20.56■□□□□ 0.88
UBE2D3-207ENST00000394801 SBNO2Q9Y2G9 1366 aa20.55■□□□□ 0.88
UBE2D3-207ENST00000394801 MYO3AQ8NEV4 1616 aa20.55■□□□□ 0.88
UBE2D3-207ENST00000394801 KDM5AP29375 1690 aaKnown RBP20.55■□□□□ 0.88
UBE2D3-207ENST00000394801 NOS1P29475 1434 aa20.55■□□□□ 0.88
UBE2D3-207ENST00000394801 DIP2CQ9Y2E4 1556 aa20.55■□□□□ 0.88
UBE2D3-207ENST00000394801 RPGRIP1LQ68CZ1 1315 aa20.54■□□□□ 0.88
UBE2D3-207ENST00000394801 ERVK-7P63135 1459 aa20.54■□□□□ 0.88
UBE2D3-207ENST00000394801 ASXL1Q8IXJ9 1541 aa20.54■□□□□ 0.88
UBE2D3-207ENST00000394801 PPLO60437 1756 aa20.53■□□□□ 0.88
UBE2D3-207ENST00000394801 RICTORQ6R327 1708 aa20.53■□□□□ 0.88
UBE2D3-207ENST00000394801 CAMSAP1Q5T5Y3 1602 aa20.53■□□□□ 0.88
UBE2D3-207ENST00000394801 PIK3C2GO75747 1445 aa20.52■□□□□ 0.88
UBE2D3-207ENST00000394801 RBM19Q9Y4C8 960 aaKnown RBP20.52■□□□□ 0.88
UBE2D3-207ENST00000394801 GLI2P10070 1586 aa20.52■□□□□ 0.88
UBE2D3-207ENST00000394801 C14orf93Q9H972 538 aaKnown RBP20.51■□□□□ 0.87
UBE2D3-207ENST00000394801 ARHGAP31Q2M1Z3 1444 aa20.51■□□□□ 0.87
UBE2D3-207ENST00000394801 SENP3-EIF4A1A0A087X0R7 540 aa20.51■□□□□ 0.87
UBE2D3-207ENST00000394801 PPP2R1AP30153 589 aa20.51■□□□□ 0.87
UBE2D3-207ENST00000394801 CFAP65Q6ZU64 1925 aaKnown RBP20.5■□□□□ 0.87
UBE2D3-207ENST00000394801 PIK3C2BO00750 1634 aa20.49■□□□□ 0.87
UBE2D3-207ENST00000394801 SIGLEC1Q9BZZ2 1709 aa20.48■□□□□ 0.87
UBE2D3-207ENST00000394801 CHGAP10645 457 aaKnown RBP20.48■□□□□ 0.87
UBE2D3-207ENST00000394801 B4GALNT3Q6L9W6 998 aa20.48■□□□□ 0.87
UBE2D3-207ENST00000394801 ADGRB1O14514 1584 aa20.47■□□□□ 0.87
UBE2D3-207ENST00000394801 ZC3H13Q5T200 1668 aaKnown RBP20.47■□□□□ 0.87
UBE2D3-207ENST00000394801 CENPJQ9HC77 1338 aaPredicted RBP20.45■□□□□ 0.86
UBE2D3-207ENST00000394801 ADAMTS8Q9UP79 889 aa20.44■□□□□ 0.86
UBE2D3-207ENST00000394801 YEATS2Q9ULM3 1422 aa20.43■□□□□ 0.86
UBE2D3-207ENST00000394801 CYB5RLQ6IPT4 315 aa20.43■□□□□ 0.86
UBE2D3-207ENST00000394801 RCAN3Q9UKA8 241 aa20.42■□□□□ 0.86
UBE2D3-207ENST00000394801 SALL2Q9Y467 1007 aaPredicted RBP20.42■□□□□ 0.86
UBE2D3-207ENST00000394801 CARD14Q9BXL6 1004 aa20.41■□□□□ 0.86
UBE2D3-207ENST00000394801 VGFO15240 615 aaPredicted RBP20.4■□□□□ 0.86
UBE2D3-207ENST00000394801 RRP1P56182 461 aaKnown RBP20.4■□□□□ 0.86
UBE2D3-207ENST00000394801 NEXMIFQ5QGS0 1516 aa20.4■□□□□ 0.86
UBE2D3-207ENST00000394801 SLC52A1Q9NWF4 448 aa20.39■□□□□ 0.86
UBE2D3-207ENST00000394801 CDCA7LQ96GN5 454 aa20.39■□□□□ 0.85
UBE2D3-207ENST00000394801 ZFYVE9O95405 1425 aa20.39■□□□□ 0.85
UBE2D3-207ENST00000394801 TRAK1Q9UPV9 953 aa20.38■□□□□ 0.85
UBE2D3-207ENST00000394801 WDR43Q15061 677 aaKnown RBP eCLIP20.38■□□□□ 0.85
UBE2D3-207ENST00000394801 QRICH2Q9H0J4 1663 aa20.37■□□□□ 0.85
UBE2D3-207ENST00000394801 IDI1Q13907 227 aa20.37■□□□□ 0.85
UBE2D3-207ENST00000394801 PUS7Q96PZ0 661 aaKnown RBP20.36■□□□□ 0.85
UBE2D3-207ENST00000394801 TMEM132EQ6IEE7 984 aa20.36■□□□□ 0.85
UBE2D3-207ENST00000394801 CCDC136Q96JN2 1154 aa20.35■□□□□ 0.85
UBE2D3-207ENST00000394801 DIP2BQ9P265 1576 aa20.34■□□□□ 0.85
UBE2D3-207ENST00000394801 ZNF521Q96K83 1311 aa20.33■□□□□ 0.84
UBE2D3-207ENST00000394801 TRHP20396 242 aaPredicted RBP20.32■□□□□ 0.84
UBE2D3-207ENST00000394801 FAM69CQ0P6D2 419 aa20.32■□□□□ 0.84
UBE2D3-207ENST00000394801 PREX1Q8TCU6 1659 aa20.32■□□□□ 0.84
UBE2D3-207ENST00000394801 AEBP2Q6ZN18 517 aaPredicted RBP20.31■□□□□ 0.84
UBE2D3-207ENST00000394801 PLEKHH1Q9ULM0 1364 aa20.31■□□□□ 0.84
UBE2D3-207ENST00000394801 REREQ9P2R6 1566 aa20.3■□□□□ 0.84
UBE2D3-207ENST00000394801 ARHGEF28Q8N1W1 1705 aaKnown RBP20.3■□□□□ 0.84
UBE2D3-207ENST00000394801 TMEM131LA2VDJ0 1609 aa20.3■□□□□ 0.84
UBE2D3-207ENST00000394801 FANCIQ9NVI1 1328 aa20.29■□□□□ 0.84
UBE2D3-207ENST00000394801 PPP6R1Q9UPN7 881 aa20.28■□□□□ 0.84
UBE2D3-207ENST00000394801 POLR3AO14802 1390 aaPredicted RBP20.28■□□□□ 0.84
UBE2D3-207ENST00000394801 SLC12A5Q9H2X9 1139 aa20.28■□□□□ 0.84
UBE2D3-207ENST00000394801 USP32Q8NFA0 1604 aa20.27■□□□□ 0.84
UBE2D3-207ENST00000394801 NSD3Q9BZ95 1437 aa20.27■□□□□ 0.84
UBE2D3-207ENST00000394801 AGLP35573 1532 aa20.27■□□□□ 0.84
UBE2D3-207ENST00000394801 NUTM2DQ5VT03 806 aaPredicted RBP20.26■□□□□ 0.83
UBE2D3-207ENST00000394801 EVC2Q86UK5 1308 aa20.26■□□□□ 0.83
UBE2D3-207ENST00000394801 EXOC6Q8TAG9 804 aa20.26■□□□□ 0.83
UBE2D3-207ENST00000394801 DUSP27Q5VZP5 1158 aa20.26■□□□□ 0.83
UBE2D3-207ENST00000394801 NGEFQ8N5V2 710 aa20.25■□□□□ 0.83
UBE2D3-207ENST00000394801 TULP4Q9NRJ4 1543 aa20.25■□□□□ 0.83
UBE2D3-207ENST00000394801 MYO5BQ9ULV0 1848 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms