RNA–Protein interactions for RNA: ENST00000394738.7

RFT1-202, Transcript of RFT1 homolog, humanhuman

TSL 5 BASIC

Gene RFT1, Length 1,800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-202ENST00000394738 RIMS2Q9UQ26 1411 aa29.45■■■□□ 2.3
RFT1-202ENST00000394738 KDM2AQ9Y2K7 1162 aa29.45■■■□□ 2.3
RFT1-202ENST00000394738 HSPA2P54652 639 aa29.43■■■□□ 2.3
RFT1-202ENST00000394738 RPGRIP1LQ68CZ1 1315 aa29.43■■■□□ 2.3
RFT1-202ENST00000394738 SLIT1O75093 1534 aa29.43■■■□□ 2.3
RFT1-202ENST00000394738 ZFYVE9O95405 1425 aa29.42■■■□□ 2.3
RFT1-202ENST00000394738 ARHGAP23Q9P227 1491 aa29.42■■■□□ 2.3
RFT1-202ENST00000394738 AEBP2Q6ZN18 517 aaPredicted RBP29.41■■■□□ 2.3
RFT1-202ENST00000394738 TIMELESSQ9UNS1 1208 aa29.39■■■□□ 2.3
RFT1-202ENST00000394738 LTKP29376 864 aa29.38■■■□□ 2.29
RFT1-202ENST00000394738 TXNDC2Q86VQ3 553 aa29.38■■■□□ 2.29
RFT1-202ENST00000394738 SENP3Q9H4L4 574 aaPredicted RBP29.38■■■□□ 2.29
RFT1-202ENST00000394738 ADGRF5Q8IZF2 1346 aa29.36■■■□□ 2.29
RFT1-202ENST00000394738 PPP1R15AO75807 674 aaPredicted RBP29.35■■■□□ 2.29
RFT1-202ENST00000394738 HDGFP51858 240 aaKnown RBP29.35■■■□□ 2.29
RFT1-202ENST00000394738 EID1Q9Y6B2 187 aa29.35■■■□□ 2.29
RFT1-202ENST00000394738 POLR1AO95602 1720 aaPredicted RBP29.35■■■□□ 2.29
RFT1-202ENST00000394738 VGFO15240 615 aaPredicted RBP29.34■■■□□ 2.29
RFT1-202ENST00000394738 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.34■■■□□ 2.29
RFT1-202ENST00000394738 MYOM2P54296 1465 aa29.33■■■□□ 2.29
RFT1-202ENST00000394738 ANKLE2Q86XL3 938 aa29.32■■■□□ 2.28
RFT1-202ENST00000394738 SCAF11Q99590 1463 aaKnown RBP29.32■■■□□ 2.28
RFT1-202ENST00000394738 NCKAP5LQ9HCH0 1330 aa29.3■■■□□ 2.28
RFT1-202ENST00000394738 STAC3Q96MF2 364 aa29.29■■■□□ 2.28
RFT1-202ENST00000394738 NRXN1Q9ULB1 1477 aa29.28■■■□□ 2.28
RFT1-202ENST00000394738 STRCQ7RTU9 1775 aa29.28■■■□□ 2.28
RFT1-202ENST00000394738 PRAG1Q86YV5 1406 aa29.27■■■□□ 2.28
RFT1-202ENST00000394738 NBPF8Q3BBV2 869 aa29.27■■■□□ 2.28
RFT1-202ENST00000394738 IQGAP1P46940 1657 aa29.25■■■□□ 2.27
RFT1-202ENST00000394738 BCANQ96GW7 911 aa29.25■■■□□ 2.27
RFT1-202ENST00000394738 PIK3C2GO75747 1445 aa29.24■■■□□ 2.27
RFT1-202ENST00000394738 NRXN3Q9Y4C0 1643 aa29.24■■■□□ 2.27
RFT1-202ENST00000394738 PLEKHG1Q9ULL1 1385 aa29.24■■■□□ 2.27
RFT1-202ENST00000394738 ZEB1P37275 1124 aaPredicted RBP29.23■■■□□ 2.27
RFT1-202ENST00000394738 SETBP1Q9Y6X0 1596 aa29.2■■■□□ 2.26
RFT1-202ENST00000394738 MED14O60244 1454 aa29.19■■■□□ 2.26
RFT1-202ENST00000394738 TRPM1Q7Z4N2 1603 aa29.19■■■□□ 2.26
RFT1-202ENST00000394738 CFAP70Q5T0N1 1121 aa29.19■■■□□ 2.26
RFT1-202ENST00000394738 NPHP4O75161 1426 aaPredicted RBP29.19■■■□□ 2.26
RFT1-202ENST00000394738 ALKQ9UM73 1620 aa29.17■■■□□ 2.26
RFT1-202ENST00000394738 SLC26A8Q96RN1 970 aa29.17■■■□□ 2.26
RFT1-202ENST00000394738 SETD1AO15047 1707 aaKnown RBP29.17■■■□□ 2.26
RFT1-202ENST00000394738 KIAA1210Q9ULL0 1709 aa29.15■■■□□ 2.26
RFT1-202ENST00000394738 ADAMTS13Q76LX8 1427 aa29.15■■■□□ 2.26
RFT1-202ENST00000394738 C14orf93Q9H972 538 aaKnown RBP29.15■■■□□ 2.26
RFT1-202ENST00000394738 LAMC1P11047 1609 aa29.14■■■□□ 2.26
RFT1-202ENST00000394738 NBPF1Q3BBV0 1214 aa29.13■■■□□ 2.25
RFT1-202ENST00000394738 TMEM132EQ6IEE7 984 aa29.1■■■□□ 2.25
RFT1-202ENST00000394738 RALGAPBQ86X10 1494 aa29.09■■■□□ 2.25
RFT1-202ENST00000394738 ASXL1Q8IXJ9 1541 aa29.08■■■□□ 2.25
RFT1-202ENST00000394738 DIP2AQ14689 1571 aa29.08■■■□□ 2.25
RFT1-202ENST00000394738 TBX22Q9Y458 520 aa29.07■■■□□ 2.24
RFT1-202ENST00000394738 METP08581 1390 aa29.07■■■□□ 2.24
RFT1-202ENST00000394738 ROCK2O75116 1388 aaKnown RBP29.06■■■□□ 2.24
RFT1-202ENST00000394738 ADGRB1O14514 1584 aa29.05■■■□□ 2.24
RFT1-202ENST00000394738 CHD2O14647 1828 aaKnown RBP29.01■■■□□ 2.23
RFT1-202ENST00000394738 CARD11Q9BXL7 1154 aa28.99■■■□□ 2.23
RFT1-202ENST00000394738 DMRT2Q9Y5R5 561 aa28.99■■■□□ 2.23
RFT1-202ENST00000394738 STK26Q9P289 416 aa28.99■■■□□ 2.23
RFT1-202ENST00000394738 GPRASP1Q5JY77 1395 aa28.98■■■□□ 2.23
RFT1-202ENST00000394738 PTPRUQ92729 1446 aa28.97■■■□□ 2.23
RFT1-202ENST00000394738 YTHDC2Q9H6S0 1430 aaKnown RBP28.97■■■□□ 2.23
RFT1-202ENST00000394738 PIK3R4Q99570 1358 aa28.94■■■□□ 2.22
RFT1-202ENST00000394738 TRAK1Q9UPV9 953 aa28.94■■■□□ 2.22
RFT1-202ENST00000394738 AMOTL2Q9Y2J4 779 aa28.93■■■□□ 2.22
RFT1-202ENST00000394738 STRCP1A6NGW2 1772 aa28.93■■■□□ 2.22
RFT1-202ENST00000394738 LRPPRCP42704 1394 aaKnown RBP28.93■■■□□ 2.22
RFT1-202ENST00000394738 KNDC1Q76NI1 1749 aa28.91■■■□□ 2.22
RFT1-202ENST00000394738 XRN1Q8IZH2 1706 aaKnown RBP28.91■■■□□ 2.22
RFT1-202ENST00000394738 ARHGEF28Q8N1W1 1705 aaKnown RBP28.9■■■□□ 2.22
RFT1-202ENST00000394738 ABCC11Q96J66 1382 aa28.88■■■□□ 2.21
RFT1-202ENST00000394738 KCNA6P17658 529 aa28.87■■■□□ 2.21
RFT1-202ENST00000394738 NWD1Q149M9 1564 aa28.87■■■□□ 2.21
RFT1-202ENST00000394738 ZNF335Q9H4Z2 1342 aaPredicted RBP28.86■■■□□ 2.21
RFT1-202ENST00000394738 USP47Q96K76 1375 aa28.85■■■□□ 2.21
RFT1-202ENST00000394738 CPS1P31327 1500 aa28.84■■■□□ 2.21
RFT1-202ENST00000394738 TECPR2O15040 1411 aa28.84■■■□□ 2.21
RFT1-202ENST00000394738 ROBO2Q9HCK4 1378 aa28.83■■■□□ 2.21
RFT1-202ENST00000394738 DLC1Q96QB1 1528 aa28.83■■■□□ 2.21
RFT1-202ENST00000394738 WAPLQ7Z5K2 1190 aa28.82■■■□□ 2.2
RFT1-202ENST00000394738 PRAM1Q96QH2 718 aa28.8■■■□□ 2.2
RFT1-202ENST00000394738 EIF4G2P78344 907 aaKnown RBP eCLIP28.8■■■□□ 2.2
RFT1-202ENST00000394738 SAFB2Q14151 953 aaKnown RBP eCLIP28.8■■■□□ 2.2
RFT1-202ENST00000394738 HIRIP3Q9BW71 556 aaPredicted RBP28.8■■■□□ 2.2
RFT1-202ENST00000394738 PLEKHH1Q9ULM0 1364 aa28.8■■■□□ 2.2
RFT1-202ENST00000394738 PTCH1Q13635 1447 aa28.79■■■□□ 2.2
RFT1-202ENST00000394738 ST20-MTHFSA0A0A6YYL1 179 aa28.78■■■□□ 2.2
RFT1-202ENST00000394738 HSPA5P11021 654 aaKnown RBP28.78■■■□□ 2.2
RFT1-202ENST00000394738 POGKQ9P215 609 aa28.78■■■□□ 2.2
RFT1-202ENST00000394738 EIF3AQ14152 1382 aaKnown RBP28.78■■■□□ 2.2
RFT1-202ENST00000394738 RBM33Q96EV2 1170 aaKnown RBP28.78■■■□□ 2.2
RFT1-202ENST00000394738 QRICH2Q9H0J4 1663 aa28.77■■■□□ 2.2
RFT1-202ENST00000394738 SIRT1Q96EB6 747 aa28.76■■■□□ 2.19
RFT1-202ENST00000394738 NKTRP30414 1462 aaKnown RBP28.76■■■□□ 2.19
RFT1-202ENST00000394738 FAM135BQ49AJ0 1406 aa28.75■■■□□ 2.19
RFT1-202ENST00000394738 CENPJQ9HC77 1338 aaPredicted RBP28.75■■■□□ 2.19
RFT1-202ENST00000394738 PROSER2Q86WR7 435 aaPredicted RBP28.75■■■□□ 2.19
RFT1-202ENST00000394738 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.73■■■□□ 2.19
RFT1-202ENST00000394738 XIRP1Q702N8 1843 aaKnown RBP28.71■■■□□ 2.19
RFT1-202ENST00000394738 LTBP4Q8N2S1 1624 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms