RNA–Protein interactions for RNA: ENST00000394239.7

TUBD1-205, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-205ENST00000394239 ZFYVE9O95405 1425 aa17.59■□□□□ 0.41
TUBD1-205ENST00000394239 NUTM2DQ5VT03 806 aaPredicted RBP17.59■□□□□ 0.41
TUBD1-205ENST00000394239 POLR1AO95602 1720 aaPredicted RBP17.58■□□□□ 0.4
TUBD1-205ENST00000394239 TXNDC2Q86VQ3 553 aa17.58■□□□□ 0.4
TUBD1-205ENST00000394239 ANKLE2Q86XL3 938 aa17.58■□□□□ 0.4
TUBD1-205ENST00000394239 SENP3Q9H4L4 574 aaPredicted RBP17.58■□□□□ 0.4
TUBD1-205ENST00000394239 MIER1Q8N108 512 aa17.57■□□□□ 0.4
TUBD1-205ENST00000394239 SCAF11Q99590 1463 aaKnown RBP17.57■□□□□ 0.4
TUBD1-205ENST00000394239 KIF1BO60333 1816 aa17.57■□□□□ 0.4
TUBD1-205ENST00000394239 SPATA31E1Q6ZUB1 1445 aa17.56■□□□□ 0.4
TUBD1-205ENST00000394239 RIMS2Q9UQ26 1411 aa17.56■□□□□ 0.4
TUBD1-205ENST00000394239 TONSLQ96HA7 1378 aa17.56■□□□□ 0.4
TUBD1-205ENST00000394239 CENPBP07199 599 aaPredicted RBP17.55■□□□□ 0.4
TUBD1-205ENST00000394239 RGL3Q3MIN7 710 aa17.54■□□□□ 0.4
TUBD1-205ENST00000394239 ZNF326Q5BKZ1 582 aaKnown RBP17.54■□□□□ 0.4
TUBD1-205ENST00000394239 MED14O60244 1454 aa17.54■□□□□ 0.4
TUBD1-205ENST00000394239 NEXMIFQ5QGS0 1516 aa17.53■□□□□ 0.4
TUBD1-205ENST00000394239 NPHP4O75161 1426 aaPredicted RBP17.53■□□□□ 0.4
TUBD1-205ENST00000394239 PPP1R15AO75807 674 aaPredicted RBP17.53■□□□□ 0.4
TUBD1-205ENST00000394239 EID1Q9Y6B2 187 aa17.52■□□□□ 0.4
TUBD1-205ENST00000394239 IQGAP1P46940 1657 aa17.5■□□□□ 0.39
TUBD1-205ENST00000394239 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
TUBD1-205ENST00000394239 PPLO60437 1756 aa17.47■□□□□ 0.39
TUBD1-205ENST00000394239 SLC26A8Q96RN1 970 aa17.47■□□□□ 0.39
TUBD1-205ENST00000394239 PLEKHG1Q9ULL1 1385 aa17.47■□□□□ 0.39
TUBD1-205ENST00000394239 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.46■□□□□ 0.39
TUBD1-205ENST00000394239 IFT172Q9UG01 1749 aa17.45■□□□□ 0.38
TUBD1-205ENST00000394239 ADGRF5Q8IZF2 1346 aa17.45■□□□□ 0.38
TUBD1-205ENST00000394239 ZNF335Q9H4Z2 1342 aaPredicted RBP17.45■□□□□ 0.38
TUBD1-205ENST00000394239 NRXN3Q9Y4C0 1643 aa17.45■□□□□ 0.38
TUBD1-205ENST00000394239 ADAMTS13Q76LX8 1427 aa17.44■□□□□ 0.38
TUBD1-205ENST00000394239 RPGRIP1LQ68CZ1 1315 aa17.44■□□□□ 0.38
TUBD1-205ENST00000394239 HDGFP51858 240 aaKnown RBP17.43■□□□□ 0.38
TUBD1-205ENST00000394239 BCANQ96GW7 911 aa17.42■□□□□ 0.38
TUBD1-205ENST00000394239 YTHDC1Q96MU7 727 aaKnown RBP17.41■□□□□ 0.38
TUBD1-205ENST00000394239 SETBP1Q9Y6X0 1596 aa17.41■□□□□ 0.38
TUBD1-205ENST00000394239 VGFO15240 615 aaPredicted RBP17.4■□□□□ 0.38
TUBD1-205ENST00000394239 STRCP1A6NGW2 1772 aa17.4■□□□□ 0.38
TUBD1-205ENST00000394239 DCAF11Q8TEB1 546 aa17.39■□□□□ 0.37
TUBD1-205ENST00000394239 KDM2AQ9Y2K7 1162 aa17.39■□□□□ 0.37
TUBD1-205ENST00000394239 LTBP4Q8N2S1 1624 aa17.39■□□□□ 0.37
TUBD1-205ENST00000394239 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
TUBD1-205ENST00000394239 NRXN1Q9ULB1 1477 aa17.37■□□□□ 0.37
TUBD1-205ENST00000394239 METP08581 1390 aa17.37■□□□□ 0.37
TUBD1-205ENST00000394239 PIK3C2GO75747 1445 aa17.37■□□□□ 0.37
TUBD1-205ENST00000394239 MYOM2P54296 1465 aa17.36■□□□□ 0.37
TUBD1-205ENST00000394239 L3MBTL2Q969R5 705 aa17.36■□□□□ 0.37
TUBD1-205ENST00000394239 TBX22Q9Y458 520 aa17.36■□□□□ 0.37
TUBD1-205ENST00000394239 SETD1AO15047 1707 aaKnown RBP17.36■□□□□ 0.37
TUBD1-205ENST00000394239 ALKQ9UM73 1620 aa17.36■□□□□ 0.37
TUBD1-205ENST00000394239 PTPRUQ92729 1446 aa17.35■□□□□ 0.37
TUBD1-205ENST00000394239 DIP2AQ14689 1571 aa17.34■□□□□ 0.37
TUBD1-205ENST00000394239 CFAP70Q5T0N1 1121 aa17.32■□□□□ 0.36
TUBD1-205ENST00000394239 ASXL1Q8IXJ9 1541 aa17.32■□□□□ 0.36
TUBD1-205ENST00000394239 CHD2O14647 1828 aaKnown RBP17.31■□□□□ 0.36
TUBD1-205ENST00000394239 RBM33Q96EV2 1170 aaKnown RBP17.31■□□□□ 0.36
TUBD1-205ENST00000394239 NWD1Q149M9 1564 aa17.3■□□□□ 0.36
TUBD1-205ENST00000394239 KCNA6P17658 529 aa17.3■□□□□ 0.36
TUBD1-205ENST00000394239 DDX10Q13206 875 aaKnown RBP17.29■□□□□ 0.36
TUBD1-205ENST00000394239 TMEM132EQ6IEE7 984 aa17.29■□□□□ 0.36
TUBD1-205ENST00000394239 HIRIP3Q9BW71 556 aaPredicted RBP17.29■□□□□ 0.36
TUBD1-205ENST00000394239 C14orf93Q9H972 538 aaKnown RBP17.29■□□□□ 0.36
TUBD1-205ENST00000394239 AMOTL2Q9Y2J4 779 aa17.28■□□□□ 0.36
TUBD1-205ENST00000394239 PIK3R4Q99570 1358 aa17.28■□□□□ 0.36
TUBD1-205ENST00000394239 PRAG1Q86YV5 1406 aa17.28■□□□□ 0.36
TUBD1-205ENST00000394239 LRRC7Q96NW7 1537 aa17.28■□□□□ 0.36
TUBD1-205ENST00000394239 CERKQ8TCT0 537 aa17.27■□□□□ 0.36
TUBD1-205ENST00000394239 XRN1Q8IZH2 1706 aaKnown RBP17.27■□□□□ 0.35
TUBD1-205ENST00000394239 CPS1P31327 1500 aa17.27■□□□□ 0.35
TUBD1-205ENST00000394239 NBPF8Q3BBV2 869 aa17.25■□□□□ 0.35
TUBD1-205ENST00000394239 STAC3Q96MF2 364 aa17.25■□□□□ 0.35
TUBD1-205ENST00000394239 ADGRB1O14514 1584 aa17.25■□□□□ 0.35
TUBD1-205ENST00000394239 XIRP1Q702N8 1843 aaKnown RBP17.25■□□□□ 0.35
TUBD1-205ENST00000394239 NBPF1Q3BBV0 1214 aa17.23■□□□□ 0.35
TUBD1-205ENST00000394239 STK26Q9P289 416 aa17.23■□□□□ 0.35
TUBD1-205ENST00000394239 NKTRP30414 1462 aaKnown RBP17.23■□□□□ 0.35
TUBD1-205ENST00000394239 TMEM94Q12767 1356 aa17.23■□□□□ 0.35
TUBD1-205ENST00000394239 PROSER2Q86WR7 435 aaPredicted RBP17.23■□□□□ 0.35
TUBD1-205ENST00000394239 LAMC1P11047 1609 aa17.22■□□□□ 0.35
TUBD1-205ENST00000394239 ROBO2Q9HCK4 1378 aa17.22■□□□□ 0.35
TUBD1-205ENST00000394239 YTHDC2Q9H6S0 1430 aaKnown RBP17.21■□□□□ 0.35
TUBD1-205ENST00000394239 GTF3C3Q9Y5Q9 886 aa17.21■□□□□ 0.35
TUBD1-205ENST00000394239 EIF4G2P78344 907 aaKnown RBP eCLIP17.2■□□□□ 0.34
TUBD1-205ENST00000394239 LRPPRCP42704 1394 aaKnown RBP17.2■□□□□ 0.34
TUBD1-205ENST00000394239 HSPA5P11021 654 aaKnown RBP17.2■□□□□ 0.34
TUBD1-205ENST00000394239 PLEKHH1Q9ULM0 1364 aa17.18■□□□□ 0.34
TUBD1-205ENST00000394239 TRPM1Q7Z4N2 1603 aa17.18■□□□□ 0.34
TUBD1-205ENST00000394239 TECPR2O15040 1411 aa17.18■□□□□ 0.34
TUBD1-205ENST00000394239 PTCH1Q13635 1447 aa17.18■□□□□ 0.34
TUBD1-205ENST00000394239 ABCC11Q96J66 1382 aa17.17■□□□□ 0.34
TUBD1-205ENST00000394239 WAPLQ7Z5K2 1190 aa17.17■□□□□ 0.34
TUBD1-205ENST00000394239 KIAA1210Q9ULL0 1709 aa17.17■□□□□ 0.34
TUBD1-205ENST00000394239 ANP32CO43423 234 aa17.16■□□□□ 0.34
TUBD1-205ENST00000394239 TRAK1Q9UPV9 953 aa17.16■□□□□ 0.34
TUBD1-205ENST00000394239 KNDC1Q76NI1 1749 aa17.15■□□□□ 0.34
TUBD1-205ENST00000394239 IQSEC2Q5JU85 1478 aa17.15■□□□□ 0.34
TUBD1-205ENST00000394239 NALCNQ8IZF0 1738 aa17.13■□□□□ 0.33
TUBD1-205ENST00000394239 SAFB2Q14151 953 aaKnown RBP eCLIP17.12■□□□□ 0.33
TUBD1-205ENST00000394239 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
TUBD1-205ENST00000394239 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms