RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 KDM4FA0A1W2PPD8 638 aa34.65■■■■□ 3.14
LRFN4-202ENST00000393952 STAC3Q96MF2 364 aa34.65■■■■□ 3.14
LRFN4-202ENST00000393952 SETD1BQ9UPS6 1966 aaKnown RBP34.62■■■■□ 3.13
LRFN4-202ENST00000393952 ADGRF5Q8IZF2 1346 aa34.6■■■■□ 3.13
LRFN4-202ENST00000393952 TRPM1Q7Z4N2 1603 aa34.58■■■■□ 3.13
LRFN4-202ENST00000393952 CEP170BQ9Y4F5 1589 aaPredicted RBP34.58■■■■□ 3.13
LRFN4-202ENST00000393952 RALGAPBQ86X10 1494 aa34.58■■■■□ 3.13
LRFN4-202ENST00000393952 NRXN1Q9ULB1 1477 aa34.58■■■■□ 3.13
LRFN4-202ENST00000393952 NUTM2DQ5VT03 806 aaPredicted RBP34.57■■■■□ 3.13
LRFN4-202ENST00000393952 RIMS2Q9UQ26 1411 aa34.56■■■■□ 3.12
LRFN4-202ENST00000393952 ZNF142P52746 1687 aaPredicted RBP34.54■■■■□ 3.12
LRFN4-202ENST00000393952 ZFYVE9O95405 1425 aa34.53■■■■□ 3.12
LRFN4-202ENST00000393952 VGFO15240 615 aaPredicted RBP34.53■■■■□ 3.12
LRFN4-202ENST00000393952 TMEM2Q9UHN6 1383 aa34.51■■■■□ 3.11
LRFN4-202ENST00000393952 PIK3C2GO75747 1445 aa34.48■■■■□ 3.11
LRFN4-202ENST00000393952 KIAA1210Q9ULL0 1709 aa34.47■■■■□ 3.11
LRFN4-202ENST00000393952 ROCK2O75116 1388 aaKnown RBP34.45■■■■□ 3.11
LRFN4-202ENST00000393952 NBPF1Q3BBV0 1214 aa34.45■■■■□ 3.11
LRFN4-202ENST00000393952 THEMISQ8N1K5 641 aaPredicted RBP34.45■■■■□ 3.11
LRFN4-202ENST00000393952 SLIT1O75093 1534 aa34.44■■■■□ 3.1
LRFN4-202ENST00000393952 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.44■■■■□ 3.1
LRFN4-202ENST00000393952 ARHGAP23Q9P227 1491 aa34.44■■■■□ 3.1
LRFN4-202ENST00000393952 CFAP70Q5T0N1 1121 aa34.41■■■■□ 3.1
LRFN4-202ENST00000393952 GPRASP1Q5JY77 1395 aa34.4■■■■□ 3.1
LRFN4-202ENST00000393952 HDGFP51858 240 aaKnown RBP34.4■■■■□ 3.1
LRFN4-202ENST00000393952 CARD11Q9BXL7 1154 aa34.4■■■■□ 3.1
LRFN4-202ENST00000393952 SENP3Q9H4L4 574 aaPredicted RBP34.4■■■■□ 3.1
LRFN4-202ENST00000393952 LAMC1P11047 1609 aa34.38■■■■□ 3.09
LRFN4-202ENST00000393952 C14orf93Q9H972 538 aaKnown RBP34.37■■■■□ 3.09
LRFN4-202ENST00000393952 LTKP29376 864 aa34.36■■■■□ 3.09
LRFN4-202ENST00000393952 TXNDC2Q86VQ3 553 aa34.34■■■■□ 3.09
LRFN4-202ENST00000393952 EID1Q9Y6B2 187 aa34.33■■■■□ 3.09
LRFN4-202ENST00000393952 EIF4G2P78344 907 aaKnown RBP eCLIP34.32■■■■□ 3.09
LRFN4-202ENST00000393952 HSPA5P11021 654 aaKnown RBP34.32■■■■□ 3.08
LRFN4-202ENST00000393952 SETBP1Q9Y6X0 1596 aa34.31■■■■□ 3.08
LRFN4-202ENST00000393952 USP47Q96K76 1375 aa34.31■■■■□ 3.08
LRFN4-202ENST00000393952 NRXN3Q9Y4C0 1643 aa34.31■■■■□ 3.08
LRFN4-202ENST00000393952 ALKQ9UM73 1620 aa34.31■■■■□ 3.08
LRFN4-202ENST00000393952 IQGAP1P46940 1657 aa34.3■■■■□ 3.08
LRFN4-202ENST00000393952 ZNF316A6NFI3 1004 aaPredicted RBP34.3■■■■□ 3.08
LRFN4-202ENST00000393952 HIRIP3Q9BW71 556 aaPredicted RBP34.3■■■■□ 3.08
LRFN4-202ENST00000393952 SCAF11Q99590 1463 aaKnown RBP34.29■■■■□ 3.08
LRFN4-202ENST00000393952 ADGRB1O14514 1584 aa34.28■■■■□ 3.08
LRFN4-202ENST00000393952 PLEKHG1Q9ULL1 1385 aa34.27■■■■□ 3.08
LRFN4-202ENST00000393952 SETD1AO15047 1707 aaKnown RBP34.26■■■■□ 3.07
LRFN4-202ENST00000393952 ASXL1Q8IXJ9 1541 aa34.25■■■■□ 3.07
LRFN4-202ENST00000393952 TMEM132EQ6IEE7 984 aa34.24■■■■□ 3.07
LRFN4-202ENST00000393952 BCANQ96GW7 911 aa34.23■■■■□ 3.07
LRFN4-202ENST00000393952 ANKLE2Q86XL3 938 aa34.21■■■■□ 3.07
LRFN4-202ENST00000393952 ADAMTS13Q76LX8 1427 aa34.19■■■■□ 3.06
LRFN4-202ENST00000393952 LMTK3Q96Q04 1460 aa34.17■■■■□ 3.06
LRFN4-202ENST00000393952 POLR1AO95602 1720 aaPredicted RBP34.17■■■■□ 3.06
LRFN4-202ENST00000393952 ST20-MTHFSA0A0A6YYL1 179 aa34.15■■■■□ 3.06
LRFN4-202ENST00000393952 MED14O60244 1454 aa34.13■■■■□ 3.05
LRFN4-202ENST00000393952 METP08581 1390 aa34.12■■■■□ 3.05
LRFN4-202ENST00000393952 SLC26A8Q96RN1 970 aa34.11■■■■□ 3.05
LRFN4-202ENST00000393952 YTHDC2Q9H6S0 1430 aaKnown RBP34.11■■■■□ 3.05
LRFN4-202ENST00000393952 HSPA2P54652 639 aa34.11■■■■□ 3.05
LRFN4-202ENST00000393952 TRAK1Q9UPV9 953 aa34.11■■■■□ 3.05
LRFN4-202ENST00000393952 NCKAP5LQ9HCH0 1330 aa34.1■■■■□ 3.05
LRFN4-202ENST00000393952 EIF3AQ14152 1382 aaKnown RBP34.09■■■■□ 3.05
LRFN4-202ENST00000393952 DIP2AQ14689 1571 aa34.09■■■■□ 3.05
LRFN4-202ENST00000393952 STK26Q9P289 416 aa34.08■■■■□ 3.05
LRFN4-202ENST00000393952 ARHGEF28Q8N1W1 1705 aaKnown RBP34.07■■■■□ 3.04
LRFN4-202ENST00000393952 NPHP4O75161 1426 aaPredicted RBP34.06■■■■□ 3.04
LRFN4-202ENST00000393952 TBX22Q9Y458 520 aa34.06■■■■□ 3.04
LRFN4-202ENST00000393952 LRPPRCP42704 1394 aaKnown RBP34.05■■■■□ 3.04
LRFN4-202ENST00000393952 TESK2Q96S53 571 aa34■■■■□ 3.03
LRFN4-202ENST00000393952 C11orf95C9JLR9 678 aaPredicted RBP33.99■■■■□ 3.03
LRFN4-202ENST00000393952 KNDC1Q76NI1 1749 aa33.98■■■■□ 3.03
LRFN4-202ENST00000393952 CENPJQ9HC77 1338 aaPredicted RBP33.98■■■■□ 3.03
LRFN4-202ENST00000393952 ABCC11Q96J66 1382 aa33.97■■■■□ 3.03
LRFN4-202ENST00000393952 PTPRUQ92729 1446 aa33.97■■■■□ 3.03
LRFN4-202ENST00000393952 DLC1Q96QB1 1528 aa33.97■■■■□ 3.03
LRFN4-202ENST00000393952 QRICH2Q9H0J4 1663 aa33.97■■■■□ 3.03
LRFN4-202ENST00000393952 STRCQ7RTU9 1775 aa33.94■■■■□ 3.02
LRFN4-202ENST00000393952 TECPR2O15040 1411 aa33.93■■■■□ 3.02
LRFN4-202ENST00000393952 WASHC2AQ641Q2 1341 aa33.93■■■■□ 3.02
LRFN4-202ENST00000393952 CPS1P31327 1500 aa33.92■■■■□ 3.02
LRFN4-202ENST00000393952 PIK3R4Q99570 1358 aa33.91■■■■□ 3.02
LRFN4-202ENST00000393952 PRAM1Q96QH2 718 aa33.91■■■■□ 3.02
LRFN4-202ENST00000393952 CCDC7Q96M83 1385 aa33.91■■■■□ 3.02
LRFN4-202ENST00000393952 KIF7Q2M1P5 1343 aa33.9■■■■□ 3.02
LRFN4-202ENST00000393952 DISP3Q9P2K9 1392 aa33.89■■■■□ 3.02
LRFN4-202ENST00000393952 SBNO2Q9Y2G9 1366 aa33.88■■■■□ 3.01
LRFN4-202ENST00000393952 XRN1Q8IZH2 1706 aaKnown RBP33.88■■■■□ 3.01
LRFN4-202ENST00000393952 SAFB2Q14151 953 aaKnown RBP eCLIP33.88■■■■□ 3.01
LRFN4-202ENST00000393952 POGKQ9P215 609 aa33.88■■■■□ 3.01
LRFN4-202ENST00000393952 AMOTL2Q9Y2J4 779 aa33.88■■■■□ 3.01
LRFN4-202ENST00000393952 CHD2O14647 1828 aaKnown RBP33.87■■■■□ 3.01
LRFN4-202ENST00000393952 TMF1P82094 1093 aa33.86■■■■□ 3.01
LRFN4-202ENST00000393952 WAPLQ7Z5K2 1190 aa33.85■■■■□ 3.01
LRFN4-202ENST00000393952 PLEKHH1Q9ULM0 1364 aa33.85■■■■□ 3.01
LRFN4-202ENST00000393952 FAM135BQ49AJ0 1406 aa33.85■■■■□ 3.01
LRFN4-202ENST00000393952 ROBO2Q9HCK4 1378 aa33.85■■■■□ 3.01
LRFN4-202ENST00000393952 SIRT1Q96EB6 747 aa33.85■■■■□ 3.01
LRFN4-202ENST00000393952 POLR3GLQ9BT43 218 aa33.81■■■■□ 3
LRFN4-202ENST00000393952 PTCH1Q13635 1447 aa33.8■■■■□ 3
LRFN4-202ENST00000393952 KCNA6P17658 529 aa33.79■■■■□ 3
LRFN4-202ENST00000393952 MINK1Q8N4C8 1332 aaPredicted RBP33.78■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms