RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 ADAMTS12P58397 1594 aa15□□□□□ -0.01
R3HDM2-203ENST00000393811 EIF3AQ14152 1382 aaKnown RBP15□□□□□ -0.01
R3HDM2-203ENST00000393811 HSCBQ8IWL3 235 aa14.99□□□□□ -0.01
R3HDM2-203ENST00000393811 ADGRL2O95490 1459 aa14.99□□□□□ -0.01
R3HDM2-203ENST00000393811 MAGI1Q96QZ7 1491 aaPredicted RBP14.99□□□□□ -0.01
R3HDM2-203ENST00000393811 PDE3AQ14432 1141 aa14.98□□□□□ -0.01
R3HDM2-203ENST00000393811 BLMP54132 1417 aaPredicted RBP14.98□□□□□ -0.01
R3HDM2-203ENST00000393811 PDZRN3Q9UPQ7 1066 aa14.98□□□□□ -0.01
R3HDM2-203ENST00000393811 GRIN2AQ12879 1464 aa14.98□□□□□ -0.01
R3HDM2-203ENST00000393811 U2SURPO15042 1029 aaKnown RBP14.98□□□□□ -0.01
R3HDM2-203ENST00000393811 U2AF1L5P0DN76 240 aaPredicted RBP14.98□□□□□ -0.01
R3HDM2-203ENST00000393811 U2AF1Q01081 240 aaKnown RBP eCLIP14.98□□□□□ -0.01
R3HDM2-203ENST00000393811 AMER1Q5JTC6 1135 aaPredicted RBP14.98□□□□□ -0.01
R3HDM2-203ENST00000393811 PTPRGP23470 1445 aa14.97□□□□□ -0.01
R3HDM2-203ENST00000393811 ITSN2Q9NZM3 1697 aa14.97□□□□□ -0.01
R3HDM2-203ENST00000393811 ITPRIPQ8IWB1 547 aa14.96□□□□□ -0.01
R3HDM2-203ENST00000393811 COL17A1Q9UMD9 1497 aaPredicted RBP14.96□□□□□ -0.02
R3HDM2-203ENST00000393811 ZMYM4Q5VZL5 1548 aa14.95□□□□□ -0.02
R3HDM2-203ENST00000393811 HSP90AB1P08238 724 aaKnown RBP14.95□□□□□ -0.02
R3HDM2-203ENST00000393811 NKTRP30414 1462 aaKnown RBP14.95□□□□□ -0.02
R3HDM2-203ENST00000393811 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
R3HDM2-203ENST00000393811 CFAP70Q5T0N1 1121 aa14.95□□□□□ -0.02
R3HDM2-203ENST00000393811 ANP32BQ92688 251 aaKnown RBP14.95□□□□□ -0.02
R3HDM2-203ENST00000393811 SMC4Q9NTJ3 1288 aa14.94□□□□□ -0.02
R3HDM2-203ENST00000393811 EFCAB2Q5VUJ9 269 aa14.94□□□□□ -0.02
R3HDM2-203ENST00000393811 WWC1Q8IX03 1113 aa14.94□□□□□ -0.02
R3HDM2-203ENST00000393811 TCP11L2Q8N4U5 519 aa14.94□□□□□ -0.02
R3HDM2-203ENST00000393811 FAM135AQ9P2D6 1515 aa14.94□□□□□ -0.02
R3HDM2-203ENST00000393811 PBRM1Q86U86 1689 aa14.94□□□□□ -0.02
R3HDM2-203ENST00000393811 CCDC141Q6ZP82 1450 aa14.94□□□□□ -0.02
R3HDM2-203ENST00000393811 TRAK1Q9UPV9 953 aa14.94□□□□□ -0.02
R3HDM2-203ENST00000393811 DMRT2Q9Y5R5 561 aa14.94□□□□□ -0.02
R3HDM2-203ENST00000393811 FOXD4L1Q9NU39 408 aa14.93□□□□□ -0.02
R3HDM2-203ENST00000393811 TARBP1Q13395 1621 aaKnown RBP14.93□□□□□ -0.02
R3HDM2-203ENST00000393811 MYH16Q9H6N6 1097 aa14.93□□□□□ -0.02
R3HDM2-203ENST00000393811 SLC24A1O60721 1099 aa14.92□□□□□ -0.02
R3HDM2-203ENST00000393811 ADGBQ8N7X0 1667 aa14.92□□□□□ -0.02
R3HDM2-203ENST00000393811 KIF3BO15066 747 aa14.92□□□□□ -0.02
R3HDM2-203ENST00000393811 SAFB2Q14151 953 aaKnown RBP eCLIP14.92□□□□□ -0.02
R3HDM2-203ENST00000393811 TBC1D2Q9BYX2 928 aa14.92□□□□□ -0.02
R3HDM2-203ENST00000393811 C22orf23Q9BZE7 217 aa14.92□□□□□ -0.02
R3HDM2-203ENST00000393811 A2MP01023 1474 aa14.91□□□□□ -0.02
R3HDM2-203ENST00000393811 RUNDC1Q96C34 613 aa14.91□□□□□ -0.02
R3HDM2-203ENST00000393811 CHMP5Q9NZZ3 219 aa14.91□□□□□ -0.02
R3HDM2-203ENST00000393811 SPAG9O60271 1321 aaKnown RBP14.91□□□□□ -0.02
R3HDM2-203ENST00000393811 ARHGAP5Q13017 1502 aa14.91□□□□□ -0.02
R3HDM2-203ENST00000393811 TNNQ9UQP3 1299 aa14.9□□□□□ -0.02
R3HDM2-203ENST00000393811 NGEFQ8N5V2 710 aa14.9□□□□□ -0.02
R3HDM2-203ENST00000393811 ATP10BO94823 1461 aa14.9□□□□□ -0.02
R3HDM2-203ENST00000393811 ZKSCAN2Q63HK3 967 aa14.9□□□□□ -0.02
R3HDM2-203ENST00000393811 SYNJ2O15056 1496 aa14.9□□□□□ -0.02
R3HDM2-203ENST00000393811 TRAK2O60296 914 aa14.89□□□□□ -0.03
R3HDM2-203ENST00000393811 NCLP19338 710 aaKnown RBP14.89□□□□□ -0.03
R3HDM2-203ENST00000393811 PCDHB15Q9Y5E8 787 aa14.89□□□□□ -0.03
R3HDM2-203ENST00000393811 MCM4P33991 863 aa14.89□□□□□ -0.03
R3HDM2-203ENST00000393811 RARSP54136 660 aaKnown RBP14.88□□□□□ -0.03
R3HDM2-203ENST00000393811 DZIP1LQ8IYY4 767 aaKnown RBP14.88□□□□□ -0.03
R3HDM2-203ENST00000393811 MTHFSP49914 203 aa14.87□□□□□ -0.03
R3HDM2-203ENST00000393811 KANK1Q14678 1352 aa14.87□□□□□ -0.03
R3HDM2-203ENST00000393811 GPRASP1Q5JY77 1395 aa14.87□□□□□ -0.03
R3HDM2-203ENST00000393811 AFAP1Q8N556 730 aa14.87□□□□□ -0.03
R3HDM2-203ENST00000393811 SLC12A5Q9H2X9 1139 aa14.86□□□□□ -0.03
R3HDM2-203ENST00000393811 SHANK2Q9UPX8 1470 aa14.86□□□□□ -0.03
R3HDM2-203ENST00000393811 GOLGA6L22H0YM25 854 aa14.86□□□□□ -0.03
R3HDM2-203ENST00000393811 UBE2Q2Q8WVN8 375 aa14.86□□□□□ -0.03
R3HDM2-203ENST00000393811 ZNF521Q96K83 1311 aa14.86□□□□□ -0.03
R3HDM2-203ENST00000393811 INSRP06213 1382 aa14.86□□□□□ -0.03
R3HDM2-203ENST00000393811 RLBP1P12271 317 aa14.85□□□□□ -0.03
R3HDM2-203ENST00000393811 TSR2Q969E8 191 aaKnown RBP14.85□□□□□ -0.03
R3HDM2-203ENST00000393811 TBC1D32Q96NH3 1257 aa14.85□□□□□ -0.03
R3HDM2-203ENST00000393811 PANK2Q9BZ23 570 aa14.85□□□□□ -0.03
R3HDM2-203ENST00000393811 RRAGDQ9NQL2 400 aaPredicted RBP14.85□□□□□ -0.03
R3HDM2-203ENST00000393811 MAGI2Q86UL8 1455 aa14.85□□□□□ -0.03
R3HDM2-203ENST00000393811 HSP90AA2PQ14568 343 aaPredicted RBP14.85□□□□□ -0.03
R3HDM2-203ENST00000393811 NUTM2DQ5VT03 806 aaPredicted RBP14.85□□□□□ -0.03
R3HDM2-203ENST00000393811 GBP4Q96PP9 640 aa14.84□□□□□ -0.03
R3HDM2-203ENST00000393811 DDX11L8A8MPP1 907 aa14.84□□□□□ -0.03
R3HDM2-203ENST00000393811 XRCC6P12956 609 aaKnown RBP eCLIP14.84□□□□□ -0.03
R3HDM2-203ENST00000393811 LNPKQ9C0E8 428 aa14.84□□□□□ -0.03
R3HDM2-203ENST00000393811 CEP170Q5SW79 1584 aa14.83□□□□□ -0.03
R3HDM2-203ENST00000393811 VSIG10Q8N0Z9 540 aa14.83□□□□□ -0.04
R3HDM2-203ENST00000393811 ASXL1Q8IXJ9 1541 aa14.82□□□□□ -0.04
R3HDM2-203ENST00000393811 KDM5DQ9BY66 1539 aa14.82□□□□□ -0.04
R3HDM2-203ENST00000393811 MRE11P49959 708 aa14.82□□□□□ -0.04
R3HDM2-203ENST00000393811 NINLQ9Y2I6 1382 aa14.82□□□□□ -0.04
R3HDM2-203ENST00000393811 MVPQ14764 893 aaKnown RBP14.82□□□□□ -0.04
R3HDM2-203ENST00000393811 TMEM132EQ6IEE7 984 aa14.81□□□□□ -0.04
R3HDM2-203ENST00000393811 USP19O94966 1318 aa14.81□□□□□ -0.04
R3HDM2-203ENST00000393811 EXOSC9Q06265 439 aaKnown RBP14.81□□□□□ -0.04
R3HDM2-203ENST00000393811 AAMPQ13685 434 aa14.81□□□□□ -0.04
R3HDM2-203ENST00000393811 CARD14Q9BXL6 1004 aa14.81□□□□□ -0.04
R3HDM2-203ENST00000393811 SRPK2P78362 688 aaKnown RBP14.8□□□□□ -0.04
R3HDM2-203ENST00000393811 TRMT2AQ8IZ69 625 aaKnown RBP14.8□□□□□ -0.04
R3HDM2-203ENST00000393811 DDX19BQ9UMR2 479 aa14.8□□□□□ -0.04
R3HDM2-203ENST00000393811 SCAF11Q99590 1463 aaKnown RBP14.8□□□□□ -0.04
R3HDM2-203ENST00000393811 PIK3C2GO75747 1445 aa14.8□□□□□ -0.04
R3HDM2-203ENST00000393811 IPO8O15397 1037 aaKnown RBP14.8□□□□□ -0.04
R3HDM2-203ENST00000393811 STK26Q9P289 416 aa14.8□□□□□ -0.04
R3HDM2-203ENST00000393811 SYCP2Q9BX26 1530 aa14.79□□□□□ -0.04
R3HDM2-203ENST00000393811 STAC3Q96MF2 364 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms