RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 ABCC3O15438 1527 aa19.37■□□□□ 0.69
MKS1-203ENST00000393120 ADGRB3O60242 1522 aa19.37■□□□□ 0.69
MKS1-203ENST00000393120 CNGB1Q14028 1251 aaPredicted RBP19.36■□□□□ 0.69
MKS1-203ENST00000393120 GGT6Q6P531 493 aa19.36■□□□□ 0.69
MKS1-203ENST00000393120 IFT172Q9UG01 1749 aa19.36■□□□□ 0.69
MKS1-203ENST00000393120 DIP2CQ9Y2E4 1556 aa19.35■□□□□ 0.69
MKS1-203ENST00000393120 SMG6Q86US8 1419 aaKnown RBP19.34■□□□□ 0.69
MKS1-203ENST00000393120 CYB5RLQ6IPT4 315 aa19.34■□□□□ 0.69
MKS1-203ENST00000393120 RICTORQ6R327 1708 aa19.34■□□□□ 0.69
MKS1-203ENST00000393120 RPGRIP1LQ68CZ1 1315 aa19.34■□□□□ 0.69
MKS1-203ENST00000393120 ADGRF5Q8IZF2 1346 aa19.34■□□□□ 0.69
MKS1-203ENST00000393120 BCANQ96GW7 911 aa19.33■□□□□ 0.69
MKS1-203ENST00000393120 NOS1P29475 1434 aa19.33■□□□□ 0.68
MKS1-203ENST00000393120 ARHGAP31Q2M1Z3 1444 aa19.33■□□□□ 0.68
MKS1-203ENST00000393120 INSRP06213 1382 aa19.32■□□□□ 0.68
MKS1-203ENST00000393120 CFAP70Q5T0N1 1121 aa19.32■□□□□ 0.68
MKS1-203ENST00000393120 MROH2AA6NES4 1674 aa19.31■□□□□ 0.68
MKS1-203ENST00000393120 SYNMO15061 1565 aa19.3■□□□□ 0.68
MKS1-203ENST00000393120 SETBP1Q9Y6X0 1596 aa19.3■□□□□ 0.68
MKS1-203ENST00000393120 ZMYM4Q5VZL5 1548 aa19.29■□□□□ 0.68
MKS1-203ENST00000393120 RIMBP3CA6NJZ7 1639 aa19.29■□□□□ 0.68
MKS1-203ENST00000393120 RIMBP3BA6NNM3 1639 aa19.29■□□□□ 0.68
MKS1-203ENST00000393120 CAMSAP1Q5T5Y3 1602 aa19.29■□□□□ 0.68
MKS1-203ENST00000393120 RIMBP3Q9UFD9 1639 aa19.29■□□□□ 0.68
MKS1-203ENST00000393120 SBNO2Q9Y2G9 1366 aa19.28■□□□□ 0.68
MKS1-203ENST00000393120 NUDCQ9Y266 331 aa19.27■□□□□ 0.67
MKS1-203ENST00000393120 ZC3H13Q5T200 1668 aaKnown RBP19.26■□□□□ 0.67
MKS1-203ENST00000393120 C14orf93Q9H972 538 aaKnown RBP19.26■□□□□ 0.67
MKS1-203ENST00000393120 NPC1L1Q9UHC9 1359 aa19.26■□□□□ 0.67
MKS1-203ENST00000393120 PIK3C2GO75747 1445 aa19.26■□□□□ 0.67
MKS1-203ENST00000393120 KNSTRNQ9Y448 316 aa19.25■□□□□ 0.67
MKS1-203ENST00000393120 PIK3C2BO00750 1634 aa19.25■□□□□ 0.67
MKS1-203ENST00000393120 YEATS2Q9ULM3 1422 aa19.25■□□□□ 0.67
MKS1-203ENST00000393120 CC2D1BQ5T0F9 858 aaKnown RBP19.25■□□□□ 0.67
MKS1-203ENST00000393120 PPLO60437 1756 aa19.24■□□□□ 0.67
MKS1-203ENST00000393120 MYO3AQ8NEV4 1616 aa19.24■□□□□ 0.67
MKS1-203ENST00000393120 AMER1Q5JTC6 1135 aaPredicted RBP19.23■□□□□ 0.67
MKS1-203ENST00000393120 CHGAP10645 457 aaKnown RBP19.23■□□□□ 0.67
MKS1-203ENST00000393120 FAM69CQ0P6D2 419 aa19.23■□□□□ 0.67
MKS1-203ENST00000393120 DIP2BQ9P265 1576 aa19.23■□□□□ 0.67
MKS1-203ENST00000393120 RNF123Q5XPI4 1314 aa19.22■□□□□ 0.67
MKS1-203ENST00000393120 ERVK-7P63135 1459 aa19.22■□□□□ 0.67
MKS1-203ENST00000393120 TSHZ2Q9NRE2 1034 aa19.21■□□□□ 0.67
MKS1-203ENST00000393120 SIGLEC1Q9BZZ2 1709 aa19.21■□□□□ 0.67
MKS1-203ENST00000393120 KDM5AP29375 1690 aaKnown RBP19.21■□□□□ 0.67
MKS1-203ENST00000393120 SLC52A1Q9NWF4 448 aa19.21■□□□□ 0.67
MKS1-203ENST00000393120 ASXL1Q8IXJ9 1541 aa19.2■□□□□ 0.66
MKS1-203ENST00000393120 ADGRB1O14514 1584 aa19.2■□□□□ 0.66
MKS1-203ENST00000393120 PPP4R2Q9NY27 417 aa19.19■□□□□ 0.66
MKS1-203ENST00000393120 MYOM1P52179 1685 aa19.19■□□□□ 0.66
MKS1-203ENST00000393120 VGFO15240 615 aaPredicted RBP19.19■□□□□ 0.66
MKS1-203ENST00000393120 PDE3BQ13370 1112 aa19.19■□□□□ 0.66
MKS1-203ENST00000393120 ZFYVE9O95405 1425 aa19.18■□□□□ 0.66
MKS1-203ENST00000393120 CENPJQ9HC77 1338 aaPredicted RBP19.18■□□□□ 0.66
MKS1-203ENST00000393120 BLMP54132 1417 aaPredicted RBP19.18■□□□□ 0.66
MKS1-203ENST00000393120 PPP6R1Q9UPN7 881 aa19.17■□□□□ 0.66
MKS1-203ENST00000393120 REREQ9P2R6 1566 aa19.17■□□□□ 0.66
MKS1-203ENST00000393120 IRX6P78412 446 aaPredicted RBP19.17■□□□□ 0.66
MKS1-203ENST00000393120 PPP2R1AP30153 589 aa19.15■□□□□ 0.66
MKS1-203ENST00000393120 IDI1Q13907 227 aa19.15■□□□□ 0.66
MKS1-203ENST00000393120 NEXMIFQ5QGS0 1516 aa19.15■□□□□ 0.66
MKS1-203ENST00000393120 CFAP65Q6ZU64 1925 aaKnown RBP19.14■□□□□ 0.66
MKS1-203ENST00000393120 AGLP35573 1532 aa19.14■□□□□ 0.66
MKS1-203ENST00000393120 PUS7Q96PZ0 661 aaKnown RBP19.13■□□□□ 0.65
MKS1-203ENST00000393120 TRAK1Q9UPV9 953 aa19.11■□□□□ 0.65
MKS1-203ENST00000393120 PREX1Q8TCU6 1659 aa19.09■□□□□ 0.65
MKS1-203ENST00000393120 CARD14Q9BXL6 1004 aa19.09■□□□□ 0.65
MKS1-203ENST00000393120 TMEM132EQ6IEE7 984 aa19.08■□□□□ 0.64
MKS1-203ENST00000393120 TMEM131LA2VDJ0 1609 aa19.07■□□□□ 0.64
MKS1-203ENST00000393120 ADAMTS8Q9UP79 889 aa19.06■□□□□ 0.64
MKS1-203ENST00000393120 QRICH2Q9H0J4 1663 aa19.06■□□□□ 0.64
MKS1-203ENST00000393120 WDR43Q15061 677 aaKnown RBP eCLIP19.04■□□□□ 0.64
MKS1-203ENST00000393120 SENP3-EIF4A1A0A087X0R7 540 aa19.03■□□□□ 0.64
MKS1-203ENST00000393120 EVC2Q86UK5 1308 aa19.02■□□□□ 0.64
MKS1-203ENST00000393120 TSPOAP1O95153 1857 aa19.01■□□□□ 0.63
MKS1-203ENST00000393120 FBXO31Q5XUX0 539 aaPredicted RBP19.01■□□□□ 0.63
MKS1-203ENST00000393120 RCAN3Q9UKA8 241 aa19.01■□□□□ 0.63
MKS1-203ENST00000393120 ARHGEF28Q8N1W1 1705 aaKnown RBP19■□□□□ 0.63
MKS1-203ENST00000393120 NUTM2DQ5VT03 806 aaPredicted RBP19■□□□□ 0.63
MKS1-203ENST00000393120 SLC12A5Q9H2X9 1139 aa18.98■□□□□ 0.63
MKS1-203ENST00000393120 SALL2Q9Y467 1007 aaPredicted RBP18.98■□□□□ 0.63
MKS1-203ENST00000393120 USP32Q8NFA0 1604 aa18.97■□□□□ 0.63
MKS1-203ENST00000393120 SPATA31D1Q6ZQQ2 1576 aa18.97■□□□□ 0.63
MKS1-203ENST00000393120 NSD3Q9BZ95 1437 aa18.97■□□□□ 0.63
MKS1-203ENST00000393120 RRP1P56182 461 aaKnown RBP18.97■□□□□ 0.63
MKS1-203ENST00000393120 B4GALNT3Q6L9W6 998 aa18.97■□□□□ 0.63
MKS1-203ENST00000393120 CDCA7LQ96GN5 454 aa18.97■□□□□ 0.63
MKS1-203ENST00000393120 TULP4Q9NRJ4 1543 aa18.97■□□□□ 0.63
MKS1-203ENST00000393120 POLR3AO14802 1390 aaPredicted RBP18.97■□□□□ 0.63
MKS1-203ENST00000393120 NINLQ9Y2I6 1382 aa18.96■□□□□ 0.63
MKS1-203ENST00000393120 NGEFQ8N5V2 710 aa18.96■□□□□ 0.63
MKS1-203ENST00000393120 ARHGEF40Q8TER5 1519 aa18.96■□□□□ 0.62
MKS1-203ENST00000393120 ZNF521Q96K83 1311 aa18.95■□□□□ 0.62
MKS1-203ENST00000393120 MYO5BQ9ULV0 1848 aa18.95■□□□□ 0.62
MKS1-203ENST00000393120 ANKRD36BQ8N2N9 1353 aa18.94■□□□□ 0.62
MKS1-203ENST00000393120 RBM19Q9Y4C8 960 aaKnown RBP18.94■□□□□ 0.62
MKS1-203ENST00000393120 NSD2O96028 1365 aa18.93■□□□□ 0.62
MKS1-203ENST00000393120 YTHDC2Q9H6S0 1430 aaKnown RBP18.93■□□□□ 0.62
MKS1-203ENST00000393120 PTPRMP28827 1452 aa18.93■□□□□ 0.62
MKS1-203ENST00000393120 CLTCQ00610 1675 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms