RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 CCER2I3L3R5 266 aa20.67■□□□□ 0.9
MKS1-202ENST00000393119 ARHGAP31Q2M1Z3 1444 aa20.67■□□□□ 0.9
MKS1-202ENST00000393119 PLPPR3Q6T4P5 718 aa20.66■□□□□ 0.9
MKS1-202ENST00000393119 ARHGEF40Q8TER5 1519 aa20.65■□□□□ 0.9
MKS1-202ENST00000393119 POLR1AO95602 1720 aaPredicted RBP20.64■□□□□ 0.89
MKS1-202ENST00000393119 CLTCQ00610 1675 aaKnown RBP20.63■□□□□ 0.89
MKS1-202ENST00000393119 TRAK1Q9UPV9 953 aa20.63■□□□□ 0.89
MKS1-202ENST00000393119 AGLP35573 1532 aa20.63■□□□□ 0.89
MKS1-202ENST00000393119 MYOM2P54296 1465 aa20.62■□□□□ 0.89
MKS1-202ENST00000393119 PIK3C2BO00750 1634 aa20.61■□□□□ 0.89
MKS1-202ENST00000393119 STAC3Q96MF2 364 aa20.61■□□□□ 0.89
MKS1-202ENST00000393119 IFT172Q9UG01 1749 aa20.61■□□□□ 0.89
MKS1-202ENST00000393119 SLC52A1Q9NWF4 448 aa20.6■□□□□ 0.89
MKS1-202ENST00000393119 SCAF11Q99590 1463 aaKnown RBP20.6■□□□□ 0.89
MKS1-202ENST00000393119 REREQ9P2R6 1566 aa20.6■□□□□ 0.89
MKS1-202ENST00000393119 ZC3H13Q5T200 1668 aaKnown RBP20.6■□□□□ 0.89
MKS1-202ENST00000393119 PREX1Q8TCU6 1659 aa20.6■□□□□ 0.89
MKS1-202ENST00000393119 ERVK-7P63135 1459 aa20.6■□□□□ 0.89
MKS1-202ENST00000393119 CEBPAP49715 358 aaPredicted RBP20.6■□□□□ 0.89
MKS1-202ENST00000393119 NEURL4Q96JN8 1562 aa20.6■□□□□ 0.89
MKS1-202ENST00000393119 TMF1P82094 1093 aa20.59■□□□□ 0.89
MKS1-202ENST00000393119 C14orf93Q9H972 538 aaKnown RBP20.59■□□□□ 0.89
MKS1-202ENST00000393119 LAMC1P11047 1609 aa20.59■□□□□ 0.89
MKS1-202ENST00000393119 NRXN1Q9ULB1 1477 aa20.59■□□□□ 0.89
MKS1-202ENST00000393119 ESF1Q9H501 851 aaKnown RBP20.58■□□□□ 0.89
MKS1-202ENST00000393119 STAG3Q9UJ98 1225 aa20.58■□□□□ 0.89
MKS1-202ENST00000393119 PIK3C2GO75747 1445 aa20.58■□□□□ 0.89
MKS1-202ENST00000393119 ZMYM3Q14202 1370 aa20.58■□□□□ 0.88
MKS1-202ENST00000393119 DNAJC5Q9H3Z4 198 aa20.57■□□□□ 0.88
MKS1-202ENST00000393119 PANK3Q9H999 370 aa20.57■□□□□ 0.88
MKS1-202ENST00000393119 SENP3-EIF4A1A0A087X0R7 540 aa20.57■□□□□ 0.88
MKS1-202ENST00000393119 IQGAP1P46940 1657 aa20.56■□□□□ 0.88
MKS1-202ENST00000393119 PPLO60437 1756 aa20.56■□□□□ 0.88
MKS1-202ENST00000393119 NEXMIFQ5QGS0 1516 aa20.56■□□□□ 0.88
MKS1-202ENST00000393119 FAM9BQ8IZU0 186 aa20.56■□□□□ 0.88
MKS1-202ENST00000393119 MRS2Q9HD23 443 aa20.56■□□□□ 0.88
MKS1-202ENST00000393119 MYO5BQ9ULV0 1848 aa20.55■□□□□ 0.88
MKS1-202ENST00000393119 RPGRIP1LQ68CZ1 1315 aa20.55■□□□□ 0.88
MKS1-202ENST00000393119 VGFO15240 615 aaPredicted RBP20.54■□□□□ 0.88
MKS1-202ENST00000393119 STK26Q9P289 416 aa20.54■□□□□ 0.88
MKS1-202ENST00000393119 SAFB2Q14151 953 aaKnown RBP eCLIP20.54■□□□□ 0.88
MKS1-202ENST00000393119 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
MKS1-202ENST00000393119 PER1O15534 1290 aaPredicted RBP20.53■□□□□ 0.88
MKS1-202ENST00000393119 TMEM131LA2VDJ0 1609 aa20.52■□□□□ 0.88
MKS1-202ENST00000393119 CC2D1BQ5T0F9 858 aaKnown RBP20.52■□□□□ 0.88
MKS1-202ENST00000393119 ADGRB1O14514 1584 aa20.49■□□□□ 0.87
MKS1-202ENST00000393119 KIAA1210Q9ULL0 1709 aa20.47■□□□□ 0.87
MKS1-202ENST00000393119 HNRNPUQ00839 825 aaKnown RBP eCLIP20.47■□□□□ 0.87
MKS1-202ENST00000393119 CENPJQ9HC77 1338 aaPredicted RBP20.46■□□□□ 0.87
MKS1-202ENST00000393119 EIF3AQ14152 1382 aaKnown RBP20.46■□□□□ 0.87
MKS1-202ENST00000393119 SPATA31D1Q6ZQQ2 1576 aa20.46■□□□□ 0.87
MKS1-202ENST00000393119 A2ML1A8K2U0 1454 aa20.46■□□□□ 0.87
MKS1-202ENST00000393119 ASXL1Q8IXJ9 1541 aa20.41■□□□□ 0.86
MKS1-202ENST00000393119 TNRQ92752 1358 aa20.4■□□□□ 0.86
MKS1-202ENST00000393119 RIMS2Q9UQ26 1411 aa20.4■□□□□ 0.86
MKS1-202ENST00000393119 SETBP1Q9Y6X0 1596 aa20.4■□□□□ 0.86
MKS1-202ENST00000393119 CARD14Q9BXL6 1004 aa20.38■□□□□ 0.85
MKS1-202ENST00000393119 SLC12A5Q9H2X9 1139 aa20.38■□□□□ 0.85
MKS1-202ENST00000393119 ZFYVE9O95405 1425 aa20.38■□□□□ 0.85
MKS1-202ENST00000393119 TMC1Q8TDI8 760 aa20.37■□□□□ 0.85
MKS1-202ENST00000393119 PRAM1Q96QH2 718 aa20.37■□□□□ 0.85
MKS1-202ENST00000393119 CABP2Q9NPB3 220 aa20.37■□□□□ 0.85
MKS1-202ENST00000393119 KTN1Q86UP2 1357 aaKnown RBP20.36■□□□□ 0.85
MKS1-202ENST00000393119 MINK1Q8N4C8 1332 aaPredicted RBP20.36■□□□□ 0.85
MKS1-202ENST00000393119 CDCA8Q53HL2 280 aa20.35■□□□□ 0.85
MKS1-202ENST00000393119 WAPLQ7Z5K2 1190 aa20.35■□□□□ 0.85
MKS1-202ENST00000393119 MYBBP1AQ9BQG0 1328 aaKnown RBP20.35■□□□□ 0.85
MKS1-202ENST00000393119 BCANQ96GW7 911 aa20.35■□□□□ 0.85
MKS1-202ENST00000393119 KNSTRNQ9Y448 316 aa20.35■□□□□ 0.85
MKS1-202ENST00000393119 PARD3Q8TEW0 1356 aa20.35■□□□□ 0.85
MKS1-202ENST00000393119 RALBP1Q15311 655 aa20.34■□□□□ 0.85
MKS1-202ENST00000393119 PTPRMP28827 1452 aa20.34■□□□□ 0.85
MKS1-202ENST00000393119 AMER1Q5JTC6 1135 aaPredicted RBP20.34■□□□□ 0.85
MKS1-202ENST00000393119 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
MKS1-202ENST00000393119 ALKQ9UM73 1620 aa20.33■□□□□ 0.85
MKS1-202ENST00000393119 LTKP29376 864 aa20.33■□□□□ 0.85
MKS1-202ENST00000393119 MYOM1P52179 1685 aa20.33■□□□□ 0.84
MKS1-202ENST00000393119 YTHDC2Q9H6S0 1430 aaKnown RBP20.32■□□□□ 0.84
MKS1-202ENST00000393119 QRICH2Q9H0J4 1663 aa20.31■□□□□ 0.84
MKS1-202ENST00000393119 POGKQ9P215 609 aa20.31■□□□□ 0.84
MKS1-202ENST00000393119 METP08581 1390 aa20.31■□□□□ 0.84
MKS1-202ENST00000393119 PLEKHH1Q9ULM0 1364 aa20.31■□□□□ 0.84
MKS1-202ENST00000393119 MYO3AQ8NEV4 1616 aa20.3■□□□□ 0.84
MKS1-202ENST00000393119 SBNO2Q9Y2G9 1366 aa20.29■□□□□ 0.84
MKS1-202ENST00000393119 ARHGEF28Q8N1W1 1705 aaKnown RBP20.28■□□□□ 0.84
MKS1-202ENST00000393119 KDM5AP29375 1690 aaKnown RBP20.28■□□□□ 0.84
MKS1-202ENST00000393119 TULP4Q9NRJ4 1543 aa20.28■□□□□ 0.84
MKS1-202ENST00000393119 TXNDC2Q86VQ3 553 aa20.28■□□□□ 0.84
MKS1-202ENST00000393119 TMEM2Q9UHN6 1383 aa20.27■□□□□ 0.84
MKS1-202ENST00000393119 SRPK2P78362 688 aaKnown RBP20.27■□□□□ 0.83
MKS1-202ENST00000393119 NLRP13Q86W25 1043 aa20.26■□□□□ 0.83
MKS1-202ENST00000393119 SLC26A8Q96RN1 970 aa20.26■□□□□ 0.83
MKS1-202ENST00000393119 EVC2Q86UK5 1308 aa20.25■□□□□ 0.83
MKS1-202ENST00000393119 SALL2Q9Y467 1007 aaPredicted RBP20.25■□□□□ 0.83
MKS1-202ENST00000393119 C3P01024 1663 aa20.25■□□□□ 0.83
MKS1-202ENST00000393119 TNNT2P45379 298 aaPredicted RBP20.24■□□□□ 0.83
MKS1-202ENST00000393119 BRD4O60885 1362 aaPredicted RBP20.24■□□□□ 0.83
MKS1-202ENST00000393119 PPP2R1AP30153 589 aa20.23■□□□□ 0.83
MKS1-202ENST00000393119 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.23■□□□□ 0.83
MKS1-202ENST00000393119 SUPT16HQ9Y5B9 1047 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms