RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 ZFYVE9O95405 1425 aa19.65■□□□□ 0.74
PTN-202ENST00000393083 POLR1AO95602 1720 aaPredicted RBP19.65■□□□□ 0.74
PTN-202ENST00000393083 SCAF11Q99590 1463 aaKnown RBP19.65■□□□□ 0.74
PTN-202ENST00000393083 SIN3AQ96ST3 1273 aa19.65■□□□□ 0.74
PTN-202ENST00000393083 ANKRD30BQ9BXX2 1392 aa19.64■□□□□ 0.74
PTN-202ENST00000393083 CCDC144AA2RUR9 1427 aa19.64■□□□□ 0.73
PTN-202ENST00000393083 EID1Q9Y6B2 187 aa19.63■□□□□ 0.73
PTN-202ENST00000393083 NPHP4O75161 1426 aaPredicted RBP19.62■□□□□ 0.73
PTN-202ENST00000393083 RIMS2Q9UQ26 1411 aa19.62■□□□□ 0.73
PTN-202ENST00000393083 NEUROD1Q13562 356 aa19.61■□□□□ 0.73
PTN-202ENST00000393083 KIF1BO60333 1816 aa19.6■□□□□ 0.73
PTN-202ENST00000393083 SPATA31E1Q6ZUB1 1445 aa19.59■□□□□ 0.73
PTN-202ENST00000393083 HDGFP51858 240 aaKnown RBP19.58■□□□□ 0.73
PTN-202ENST00000393083 ZNF326Q5BKZ1 582 aaKnown RBP19.57■□□□□ 0.72
PTN-202ENST00000393083 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.57■□□□□ 0.72
PTN-202ENST00000393083 IQGAP1P46940 1657 aa19.57■□□□□ 0.72
PTN-202ENST00000393083 NUTM2DQ5VT03 806 aaPredicted RBP19.56■□□□□ 0.72
PTN-202ENST00000393083 TONSLQ96HA7 1378 aa19.55■□□□□ 0.72
PTN-202ENST00000393083 PLEKHG1Q9ULL1 1385 aa19.55■□□□□ 0.72
PTN-202ENST00000393083 NEXMIFQ5QGS0 1516 aa19.55■□□□□ 0.72
PTN-202ENST00000393083 TIMELESSQ9UNS1 1208 aa19.54■□□□□ 0.72
PTN-202ENST00000393083 RPGRIP1LQ68CZ1 1315 aa19.54■□□□□ 0.72
PTN-202ENST00000393083 PPP1R15AO75807 674 aaPredicted RBP19.53■□□□□ 0.72
PTN-202ENST00000393083 RGL3Q3MIN7 710 aa19.52■□□□□ 0.71
PTN-202ENST00000393083 ZNF335Q9H4Z2 1342 aaPredicted RBP19.51■□□□□ 0.71
PTN-202ENST00000393083 SLC26A8Q96RN1 970 aa19.49■□□□□ 0.71
PTN-202ENST00000393083 LTBP4Q8N2S1 1624 aa19.48■□□□□ 0.71
PTN-202ENST00000393083 VGFO15240 615 aaPredicted RBP19.48■□□□□ 0.71
PTN-202ENST00000393083 ADAMTS13Q76LX8 1427 aa19.48■□□□□ 0.71
PTN-202ENST00000393083 PPLO60437 1756 aa19.47■□□□□ 0.71
PTN-202ENST00000393083 BCANQ96GW7 911 aa19.46■□□□□ 0.71
PTN-202ENST00000393083 TBX22Q9Y458 520 aa19.46■□□□□ 0.71
PTN-202ENST00000393083 SETBP1Q9Y6X0 1596 aa19.46■□□□□ 0.71
PTN-202ENST00000393083 NRXN3Q9Y4C0 1643 aa19.45■□□□□ 0.7
PTN-202ENST00000393083 IFT172Q9UG01 1749 aa19.44■□□□□ 0.7
PTN-202ENST00000393083 ADGRF5Q8IZF2 1346 aa19.44■□□□□ 0.7
PTN-202ENST00000393083 DIP2AQ14689 1571 aa19.42■□□□□ 0.7
PTN-202ENST00000393083 STRCP1A6NGW2 1772 aa19.4■□□□□ 0.7
PTN-202ENST00000393083 KCNA6P17658 529 aa19.4■□□□□ 0.7
PTN-202ENST00000393083 CERKQ8TCT0 537 aa19.4■□□□□ 0.7
PTN-202ENST00000393083 MYOM2P54296 1465 aa19.39■□□□□ 0.69
PTN-202ENST00000393083 NRXN1Q9ULB1 1477 aa19.39■□□□□ 0.69
PTN-202ENST00000393083 CPS1P31327 1500 aa19.38■□□□□ 0.69
PTN-202ENST00000393083 PIK3R4Q99570 1358 aa19.38■□□□□ 0.69
PTN-202ENST00000393083 PIK3C2GO75747 1445 aa19.38■□□□□ 0.69
PTN-202ENST00000393083 METP08581 1390 aa19.37■□□□□ 0.69
PTN-202ENST00000393083 DCAF11Q8TEB1 546 aa19.36■□□□□ 0.69
PTN-202ENST00000393083 ALKQ9UM73 1620 aa19.36■□□□□ 0.69
PTN-202ENST00000393083 NWD1Q149M9 1564 aa19.36■□□□□ 0.69
PTN-202ENST00000393083 STAC3Q96MF2 364 aa19.36■□□□□ 0.69
PTN-202ENST00000393083 PTPRUQ92729 1446 aa19.35■□□□□ 0.69
PTN-202ENST00000393083 CHD2O14647 1828 aaKnown RBP19.35■□□□□ 0.69
PTN-202ENST00000393083 ZNF316A6NFI3 1004 aaPredicted RBP19.35■□□□□ 0.69
PTN-202ENST00000393083 L3MBTL2Q969R5 705 aa19.35■□□□□ 0.69
PTN-202ENST00000393083 SETD1AO15047 1707 aaKnown RBP19.34■□□□□ 0.69
PTN-202ENST00000393083 KDM2AQ9Y2K7 1162 aa19.34■□□□□ 0.69
PTN-202ENST00000393083 LRRC7Q96NW7 1537 aa19.34■□□□□ 0.69
PTN-202ENST00000393083 C14orf93Q9H972 538 aaKnown RBP19.32■□□□□ 0.68
PTN-202ENST00000393083 AMOTL2Q9Y2J4 779 aa19.32■□□□□ 0.68
PTN-202ENST00000393083 NKTRP30414 1462 aaKnown RBP19.31■□□□□ 0.68
PTN-202ENST00000393083 IQSEC2Q5JU85 1478 aa19.31■□□□□ 0.68
PTN-202ENST00000393083 CFAP70Q5T0N1 1121 aa19.29■□□□□ 0.68
PTN-202ENST00000393083 XRN1Q8IZH2 1706 aaKnown RBP19.28■□□□□ 0.68
PTN-202ENST00000393083 ASXL1Q8IXJ9 1541 aa19.28■□□□□ 0.68
PTN-202ENST00000393083 PROSER2Q86WR7 435 aaPredicted RBP19.27■□□□□ 0.68
PTN-202ENST00000393083 TMEM94Q12767 1356 aa19.27■□□□□ 0.68
PTN-202ENST00000393083 TMEM132EQ6IEE7 984 aa19.26■□□□□ 0.67
PTN-202ENST00000393083 PRAG1Q86YV5 1406 aa19.25■□□□□ 0.67
PTN-202ENST00000393083 RBM33Q96EV2 1170 aaKnown RBP19.25■□□□□ 0.67
PTN-202ENST00000393083 LAMC1P11047 1609 aa19.25■□□□□ 0.67
PTN-202ENST00000393083 XIRP1Q702N8 1843 aaKnown RBP19.24■□□□□ 0.67
PTN-202ENST00000393083 LRPPRCP42704 1394 aaKnown RBP19.23■□□□□ 0.67
PTN-202ENST00000393083 ABCC11Q96J66 1382 aa19.22■□□□□ 0.67
PTN-202ENST00000393083 ROBO2Q9HCK4 1378 aa19.22■□□□□ 0.67
PTN-202ENST00000393083 PTCH1Q13635 1447 aa19.22■□□□□ 0.67
PTN-202ENST00000393083 NCOA3Q9Y6Q9 1424 aa19.22■□□□□ 0.67
PTN-202ENST00000393083 ADGRB1O14514 1584 aa19.21■□□□□ 0.67
PTN-202ENST00000393083 YTHDC2Q9H6S0 1430 aaKnown RBP19.21■□□□□ 0.67
PTN-202ENST00000393083 MSH5O43196 834 aa19.2■□□□□ 0.66
PTN-202ENST00000393083 NBPF8Q3BBV2 869 aa19.2■□□□□ 0.66
PTN-202ENST00000393083 TECPR2O15040 1411 aa19.2■□□□□ 0.66
PTN-202ENST00000393083 FBXO41Q8TF61 875 aa19.19■□□□□ 0.66
PTN-202ENST00000393083 STK26Q9P289 416 aa19.19■□□□□ 0.66
PTN-202ENST00000393083 TRPM1Q7Z4N2 1603 aa19.18■□□□□ 0.66
PTN-202ENST00000393083 RALGAPBQ86X10 1494 aa19.17■□□□□ 0.66
PTN-202ENST00000393083 KIAA1210Q9ULL0 1709 aa19.17■□□□□ 0.66
PTN-202ENST00000393083 UBAP1LF5GYI3 381 aa19.16■□□□□ 0.66
PTN-202ENST00000393083 SIRT1Q96EB6 747 aa19.16■□□□□ 0.66
PTN-202ENST00000393083 KNDC1Q76NI1 1749 aa19.16■□□□□ 0.66
PTN-202ENST00000393083 NBPF1Q3BBV0 1214 aa19.15■□□□□ 0.66
PTN-202ENST00000393083 C19orf44Q9H6X5 657 aa19.15■□□□□ 0.66
PTN-202ENST00000393083 MSH6P52701 1360 aa19.14■□□□□ 0.65
PTN-202ENST00000393083 TOM1O60784 492 aa19.14■□□□□ 0.65
PTN-202ENST00000393083 FAM135BQ49AJ0 1406 aa19.14■□□□□ 0.65
PTN-202ENST00000393083 WAPLQ7Z5K2 1190 aa19.13■□□□□ 0.65
PTN-202ENST00000393083 C14orf37Q86TY3 774 aa19.13■□□□□ 0.65
PTN-202ENST00000393083 PLEKHH1Q9ULM0 1364 aa19.13■□□□□ 0.65
PTN-202ENST00000393083 ADGRL3Q9HAR2 1447 aa19.12■□□□□ 0.65
PTN-202ENST00000393083 DLC1Q96QB1 1528 aa19.12■□□□□ 0.65
PTN-202ENST00000393083 DIEXFQ68CQ4 756 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms