RNA–Protein interactions for RNA: ENST00000392794.3

YBX1P4-201, Transcript of Y-box binding protein 1 pseudogene 4, humanhuman

BASIC

Gene YBX1P4, Length 808 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P4-201ENST00000392794 RIMS2Q9UQ26 1411 aa35.79■■■■□ 3.32
YBX1P4-201ENST00000392794 KCNA6P17658 529 aa35.76■■■■□ 3.32
YBX1P4-201ENST00000392794 SENP3Q9H4L4 574 aaPredicted RBP35.76■■■■□ 3.32
YBX1P4-201ENST00000392794 TMEM131LA2VDJ0 1609 aa35.75■■■■□ 3.31
YBX1P4-201ENST00000392794 HSPA1LP34931 641 aa35.73■■■■□ 3.31
YBX1P4-201ENST00000392794 PLEKHG1Q9ULL1 1385 aa35.73■■■■□ 3.31
YBX1P4-201ENST00000392794 ZFYVE9O95405 1425 aa35.73■■■■□ 3.31
YBX1P4-201ENST00000392794 NAIPQ13075 1403 aa35.72■■■■□ 3.31
YBX1P4-201ENST00000392794 PROSER2Q86WR7 435 aaPredicted RBP35.7■■■■□ 3.31
YBX1P4-201ENST00000392794 TRIM52Q96A61 297 aa35.7■■■■□ 3.31
YBX1P4-201ENST00000392794 MYO5BQ9ULV0 1848 aa35.68■■■■□ 3.3
YBX1P4-201ENST00000392794 NUTM2DQ5VT03 806 aaPredicted RBP35.67■■■■□ 3.3
YBX1P4-201ENST00000392794 TMEM94Q12767 1356 aa35.64■■■■□ 3.3
YBX1P4-201ENST00000392794 HFM1A2PYH4 1435 aa35.64■■■■□ 3.3
YBX1P4-201ENST00000392794 ZNF326Q5BKZ1 582 aaKnown RBP35.62■■■■□ 3.29
YBX1P4-201ENST00000392794 TBX22Q9Y458 520 aa35.61■■■■□ 3.29
YBX1P4-201ENST00000392794 ALKQ9UM73 1620 aa35.59■■■■□ 3.29
YBX1P4-201ENST00000392794 NKTRP30414 1462 aaKnown RBP35.59■■■■□ 3.29
YBX1P4-201ENST00000392794 SPHKAPQ2M3C7 1700 aa35.58■■■■□ 3.29
YBX1P4-201ENST00000392794 RBM33Q96EV2 1170 aaKnown RBP35.56■■■■□ 3.28
YBX1P4-201ENST00000392794 SLC4A1APQ9BWU0 796 aaKnown RBP35.54■■■■□ 3.28
YBX1P4-201ENST00000392794 NWD1Q149M9 1564 aa35.54■■■■□ 3.28
YBX1P4-201ENST00000392794 MSH6P52701 1360 aa35.51■■■■□ 3.28
YBX1P4-201ENST00000392794 XIRP1Q702N8 1843 aaKnown RBP35.5■■■■□ 3.27
YBX1P4-201ENST00000392794 DIP2AQ14689 1571 aa35.49■■■■□ 3.27
YBX1P4-201ENST00000392794 C14orf37Q86TY3 774 aa35.48■■■■□ 3.27
YBX1P4-201ENST00000392794 ADAMTS13Q76LX8 1427 aa35.48■■■■□ 3.27
YBX1P4-201ENST00000392794 TRPM2O94759 1503 aa35.47■■■■□ 3.27
YBX1P4-201ENST00000392794 PIK3R4Q99570 1358 aa35.47■■■■□ 3.27
YBX1P4-201ENST00000392794 CHD2O14647 1828 aaKnown RBP35.43■■■■□ 3.26
YBX1P4-201ENST00000392794 ILDR2Q71H61 639 aa35.43■■■■□ 3.26
YBX1P4-201ENST00000392794 FAM135BQ49AJ0 1406 aa35.41■■■■□ 3.26
YBX1P4-201ENST00000392794 CLTCL1P53675 1640 aa35.41■■■■□ 3.26
YBX1P4-201ENST00000392794 AMOTL2Q9Y2J4 779 aa35.38■■■■□ 3.25
YBX1P4-201ENST00000392794 NCOA3Q9Y6Q9 1424 aa35.38■■■■□ 3.25
YBX1P4-201ENST00000392794 PHF23Q9BUL5 403 aaPredicted RBP35.35■■■■□ 3.25
YBX1P4-201ENST00000392794 SLAIN2Q9P270 581 aa35.35■■■■□ 3.25
YBX1P4-201ENST00000392794 MED1Q15648 1581 aaPredicted RBP35.34■■■■□ 3.25
YBX1P4-201ENST00000392794 KIF1BO60333 1816 aa35.34■■■■□ 3.25
YBX1P4-201ENST00000392794 ACIN1Q9UKV3 1341 aaKnown RBP35.32■■■■□ 3.25
YBX1P4-201ENST00000392794 VGFO15240 615 aaPredicted RBP35.32■■■■□ 3.24
YBX1P4-201ENST00000392794 SETBP1Q9Y6X0 1596 aa35.32■■■■□ 3.24
YBX1P4-201ENST00000392794 ATF3P18847 181 aa35.31■■■■□ 3.24
YBX1P4-201ENST00000392794 C19orf44Q9H6X5 657 aa35.3■■■■□ 3.24
YBX1P4-201ENST00000392794 CADPS2Q86UW7 1296 aa35.29■■■■□ 3.24
YBX1P4-201ENST00000392794 NEXMIFQ5QGS0 1516 aa35.28■■■■□ 3.24
YBX1P4-201ENST00000392794 FOXD1Q16676 465 aa35.28■■■■□ 3.24
YBX1P4-201ENST00000392794 RPGRIP1LQ68CZ1 1315 aa35.28■■■■□ 3.24
YBX1P4-201ENST00000392794 MPHOSPH9Q99550 1183 aa35.27■■■■□ 3.24
YBX1P4-201ENST00000392794 ROBO1Q9Y6N7 1651 aa35.27■■■■□ 3.24
YBX1P4-201ENST00000392794 PTPRUQ92729 1446 aa35.25■■■■□ 3.23
YBX1P4-201ENST00000392794 SOCS7O14512 581 aa35.23■■■■□ 3.23
YBX1P4-201ENST00000392794 NRXN3Q9Y4C0 1643 aa35.23■■■■□ 3.23
YBX1P4-201ENST00000392794 METP08581 1390 aa35.23■■■■□ 3.23
YBX1P4-201ENST00000392794 CCDC144AA2RUR9 1427 aa35.23■■■■□ 3.23
YBX1P4-201ENST00000392794 SETD5Q9C0A6 1442 aa35.2■■■■□ 3.23
YBX1P4-201ENST00000392794 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.14■■■■□ 3.22
YBX1P4-201ENST00000392794 XRN1Q8IZH2 1706 aaKnown RBP35.13■■■■□ 3.21
YBX1P4-201ENST00000392794 RGL3Q3MIN7 710 aa35.13■■■■□ 3.21
YBX1P4-201ENST00000392794 DCCP43146 1447 aa35.1■■■■□ 3.21
YBX1P4-201ENST00000392794 PHLPP1O60346 1717 aa35.07■■■■□ 3.2
YBX1P4-201ENST00000392794 RAB3GAP2Q9H2M9 1393 aa35.04■■■■□ 3.2
YBX1P4-201ENST00000392794 JCADQ9P266 1359 aa35.04■■■■□ 3.2
YBX1P4-201ENST00000392794 PPLO60437 1756 aa35.02■■■■□ 3.2
YBX1P4-201ENST00000392794 ANKRD30BQ9BXX2 1392 aa35.02■■■■□ 3.2
YBX1P4-201ENST00000392794 ADGRL3Q9HAR2 1447 aa35.01■■■■□ 3.2
YBX1P4-201ENST00000392794 BRINP3Q76B58 766 aa35■■■■□ 3.19
YBX1P4-201ENST00000392794 ADGRF5Q8IZF2 1346 aa34.99■■■■□ 3.19
YBX1P4-201ENST00000392794 PTCH1Q13635 1447 aa34.98■■■■□ 3.19
YBX1P4-201ENST00000392794 SPATA31E1Q6ZUB1 1445 aa34.98■■■■□ 3.19
YBX1P4-201ENST00000392794 ROBO2Q9HCK4 1378 aa34.94■■■■□ 3.18
YBX1P4-201ENST00000392794 MST1RQ04912 1400 aa34.94■■■■□ 3.18
YBX1P4-201ENST00000392794 AHDC1Q5TGY3 1603 aaPredicted RBP34.92■■■■□ 3.18
YBX1P4-201ENST00000392794 COL16A1Q07092 1604 aaPredicted RBP34.92■■■■□ 3.18
YBX1P4-201ENST00000392794 SETD1AO15047 1707 aaKnown RBP34.91■■■■□ 3.18
YBX1P4-201ENST00000392794 SPATA31A6Q5VVP1 1343 aa34.89■■■■□ 3.18
YBX1P4-201ENST00000392794 ASXL1Q8IXJ9 1541 aa34.89■■■■□ 3.18
YBX1P4-201ENST00000392794 STK26Q9P289 416 aa34.88■■■■□ 3.17
YBX1P4-201ENST00000392794 MEX3CQ5U5Q3 659 aaKnown RBP34.87■■■■□ 3.17
YBX1P4-201ENST00000392794 PRAG1Q86YV5 1406 aa34.87■■■■□ 3.17
YBX1P4-201ENST00000392794 NALCNQ8IZF0 1738 aa34.86■■■■□ 3.17
YBX1P4-201ENST00000392794 RGS17Q9UGC6 210 aaPredicted RBP34.86■■■■□ 3.17
YBX1P4-201ENST00000392794 HRCP23327 699 aa34.84■■■■□ 3.17
YBX1P4-201ENST00000392794 LRRC59Q96AG4 307 aaKnown RBP34.82■■■■□ 3.16
YBX1P4-201ENST00000392794 PIK3C2GO75747 1445 aa34.81■■■■□ 3.16
YBX1P4-201ENST00000392794 IFT172Q9UG01 1749 aa34.81■■■■□ 3.16
YBX1P4-201ENST00000392794 TMEM132EQ6IEE7 984 aa34.81■■■■□ 3.16
YBX1P4-201ENST00000392794 C1orf167Q5SNV9 1468 aa34.8■■■■□ 3.16
YBX1P4-201ENST00000392794 LRPPRCP42704 1394 aaKnown RBP34.79■■■■□ 3.16
YBX1P4-201ENST00000392794 NUTM2BA6NNL0 878 aaPredicted RBP34.75■■■■□ 3.15
YBX1P4-201ENST00000392794 NUTM2EB1AL46 878 aaPredicted RBP34.75■■■■□ 3.15
YBX1P4-201ENST00000392794 NUTM2AQ8IVF1 878 aaPredicted RBP34.75■■■■□ 3.15
YBX1P4-201ENST00000392794 ABCC11Q96J66 1382 aa34.74■■■■□ 3.15
YBX1P4-201ENST00000392794 SHPRHQ149N8 1683 aa34.74■■■■□ 3.15
YBX1P4-201ENST00000392794 WAPLQ7Z5K2 1190 aa34.74■■■■□ 3.15
YBX1P4-201ENST00000392794 DDX17Q92841 729 aaKnown RBP34.74■■■■□ 3.15
YBX1P4-201ENST00000392794 C14orf93Q9H972 538 aaKnown RBP34.74■■■■□ 3.15
YBX1P4-201ENST00000392794 POTEAQ6S8J7 498 aa34.73■■■■□ 3.15
YBX1P4-201ENST00000392794 TECPR2O15040 1411 aa34.72■■■■□ 3.15
YBX1P4-201ENST00000392794 MYOM2P54296 1465 aa34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms