RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 THEMISQ8N1K5 641 aaPredicted RBP24.5■■□□□ 1.51
ERCC2-202ENST00000391942 RIMS2Q9UQ26 1411 aa24.49■■□□□ 1.51
ERCC2-202ENST00000391942 RPGRIP1LQ68CZ1 1315 aa24.48■■□□□ 1.51
ERCC2-202ENST00000391942 SENP3Q9H4L4 574 aaPredicted RBP24.47■■□□□ 1.51
ERCC2-202ENST00000391942 TMEM2Q9UHN6 1383 aa24.47■■□□□ 1.51
ERCC2-202ENST00000391942 ZFYVE9O95405 1425 aa24.45■■□□□ 1.5
ERCC2-202ENST00000391942 PPP1R15AO75807 674 aaPredicted RBP24.45■■□□□ 1.5
ERCC2-202ENST00000391942 LMTK3Q96Q04 1460 aa24.43■■□□□ 1.5
ERCC2-202ENST00000391942 ADGRF5Q8IZF2 1346 aa24.43■■□□□ 1.5
ERCC2-202ENST00000391942 SLIT1O75093 1534 aa24.43■■□□□ 1.5
ERCC2-202ENST00000391942 MYOM2P54296 1465 aa24.42■■□□□ 1.5
ERCC2-202ENST00000391942 ARHGAP23Q9P227 1491 aa24.42■■□□□ 1.5
ERCC2-202ENST00000391942 VGFO15240 615 aaPredicted RBP24.41■■□□□ 1.5
ERCC2-202ENST00000391942 HSPA2P54652 639 aa24.41■■□□□ 1.5
ERCC2-202ENST00000391942 LTKP29376 864 aa24.4■■□□□ 1.5
ERCC2-202ENST00000391942 NBPF8Q3BBV2 869 aa24.4■■□□□ 1.5
ERCC2-202ENST00000391942 TXNDC2Q86VQ3 553 aa24.4■■□□□ 1.5
ERCC2-202ENST00000391942 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.4■■□□□ 1.5
ERCC2-202ENST00000391942 EID1Q9Y6B2 187 aa24.39■■□□□ 1.5
ERCC2-202ENST00000391942 PRAG1Q86YV5 1406 aa24.39■■□□□ 1.49
ERCC2-202ENST00000391942 HDGFP51858 240 aaKnown RBP24.38■■□□□ 1.49
ERCC2-202ENST00000391942 STAC3Q96MF2 364 aa24.37■■□□□ 1.49
ERCC2-202ENST00000391942 SCAF11Q99590 1463 aaKnown RBP24.36■■□□□ 1.49
ERCC2-202ENST00000391942 NRXN1Q9ULB1 1477 aa24.36■■□□□ 1.49
ERCC2-202ENST00000391942 ANKLE2Q86XL3 938 aa24.35■■□□□ 1.49
ERCC2-202ENST00000391942 BCANQ96GW7 911 aa24.34■■□□□ 1.49
ERCC2-202ENST00000391942 PIK3C2GO75747 1445 aa24.33■■□□□ 1.49
ERCC2-202ENST00000391942 AEBP2Q6ZN18 517 aaPredicted RBP24.32■■□□□ 1.48
ERCC2-202ENST00000391942 NCKAP5LQ9HCH0 1330 aa24.32■■□□□ 1.48
ERCC2-202ENST00000391942 POLR1AO95602 1720 aaPredicted RBP24.32■■□□□ 1.48
ERCC2-202ENST00000391942 IQGAP1P46940 1657 aa24.31■■□□□ 1.48
ERCC2-202ENST00000391942 TRPM1Q7Z4N2 1603 aa24.3■■□□□ 1.48
ERCC2-202ENST00000391942 CFAP70Q5T0N1 1121 aa24.3■■□□□ 1.48
ERCC2-202ENST00000391942 PLEKHG1Q9ULL1 1385 aa24.29■■□□□ 1.48
ERCC2-202ENST00000391942 NRXN3Q9Y4C0 1643 aa24.28■■□□□ 1.48
ERCC2-202ENST00000391942 SETBP1Q9Y6X0 1596 aa24.27■■□□□ 1.48
ERCC2-202ENST00000391942 NBPF1Q3BBV0 1214 aa24.26■■□□□ 1.47
ERCC2-202ENST00000391942 ALKQ9UM73 1620 aa24.26■■□□□ 1.47
ERCC2-202ENST00000391942 RALGAPBQ86X10 1494 aa24.25■■□□□ 1.47
ERCC2-202ENST00000391942 C14orf93Q9H972 538 aaKnown RBP24.25■■□□□ 1.47
ERCC2-202ENST00000391942 KIAA1210Q9ULL0 1709 aa24.24■■□□□ 1.47
ERCC2-202ENST00000391942 NPHP4O75161 1426 aaPredicted RBP24.24■■□□□ 1.47
ERCC2-202ENST00000391942 ROCK2O75116 1388 aaKnown RBP24.24■■□□□ 1.47
ERCC2-202ENST00000391942 SLC26A8Q96RN1 970 aa24.24■■□□□ 1.47
ERCC2-202ENST00000391942 LAMC1P11047 1609 aa24.23■■□□□ 1.47
ERCC2-202ENST00000391942 STRCQ7RTU9 1775 aa24.23■■□□□ 1.47
ERCC2-202ENST00000391942 ADAMTS13Q76LX8 1427 aa24.22■■□□□ 1.47
ERCC2-202ENST00000391942 SETD1AO15047 1707 aaKnown RBP24.21■■□□□ 1.47
ERCC2-202ENST00000391942 TMEM132EQ6IEE7 984 aa24.21■■□□□ 1.47
ERCC2-202ENST00000391942 MED14O60244 1454 aa24.21■■□□□ 1.47
ERCC2-202ENST00000391942 ASXL1Q8IXJ9 1541 aa24.19■■□□□ 1.46
ERCC2-202ENST00000391942 CARD11Q9BXL7 1154 aa24.19■■□□□ 1.46
ERCC2-202ENST00000391942 METP08581 1390 aa24.17■■□□□ 1.46
ERCC2-202ENST00000391942 ADGRB1O14514 1584 aa24.16■■□□□ 1.46
ERCC2-202ENST00000391942 DIP2AQ14689 1571 aa24.16■■□□□ 1.46
ERCC2-202ENST00000391942 TBX22Q9Y458 520 aa24.14■■□□□ 1.46
ERCC2-202ENST00000391942 GPRASP1Q5JY77 1395 aa24.14■■□□□ 1.46
ERCC2-202ENST00000391942 STK26Q9P289 416 aa24.13■■□□□ 1.45
ERCC2-202ENST00000391942 YTHDC2Q9H6S0 1430 aaKnown RBP24.1■■□□□ 1.45
ERCC2-202ENST00000391942 TRAK1Q9UPV9 953 aa24.1■■□□□ 1.45
ERCC2-202ENST00000391942 USP47Q96K76 1375 aa24.08■■□□□ 1.45
ERCC2-202ENST00000391942 PTPRUQ92729 1446 aa24.08■■□□□ 1.44
ERCC2-202ENST00000391942 LRPPRCP42704 1394 aaKnown RBP24.06■■□□□ 1.44
ERCC2-202ENST00000391942 HIRIP3Q9BW71 556 aaPredicted RBP24.06■■□□□ 1.44
ERCC2-202ENST00000391942 HSPA5P11021 654 aaKnown RBP24.04■■□□□ 1.44
ERCC2-202ENST00000391942 EIF4G2P78344 907 aaKnown RBP eCLIP24.04■■□□□ 1.44
ERCC2-202ENST00000391942 AMOTL2Q9Y2J4 779 aa24.04■■□□□ 1.44
ERCC2-202ENST00000391942 CHD2O14647 1828 aaKnown RBP24.04■■□□□ 1.44
ERCC2-202ENST00000391942 DMRT2Q9Y5R5 561 aa24.03■■□□□ 1.44
ERCC2-202ENST00000391942 PIK3R4Q99570 1358 aa24.03■■□□□ 1.44
ERCC2-202ENST00000391942 ARHGEF28Q8N1W1 1705 aaKnown RBP24.02■■□□□ 1.44
ERCC2-202ENST00000391942 KNDC1Q76NI1 1749 aa24.01■■□□□ 1.43
ERCC2-202ENST00000391942 XRN1Q8IZH2 1706 aaKnown RBP24.01■■□□□ 1.43
ERCC2-202ENST00000391942 ABCC11Q96J66 1382 aa24.01■■□□□ 1.43
ERCC2-202ENST00000391942 EIF3AQ14152 1382 aaKnown RBP24■■□□□ 1.43
ERCC2-202ENST00000391942 ST20-MTHFSA0A0A6YYL1 179 aa24■■□□□ 1.43
ERCC2-202ENST00000391942 KCNA6P17658 529 aa24■■□□□ 1.43
ERCC2-202ENST00000391942 SAFB2Q14151 953 aaKnown RBP eCLIP23.99■■□□□ 1.43
ERCC2-202ENST00000391942 CPS1P31327 1500 aa23.98■■□□□ 1.43
ERCC2-202ENST00000391942 PRAM1Q96QH2 718 aa23.98■■□□□ 1.43
ERCC2-202ENST00000391942 ROBO2Q9HCK4 1378 aa23.97■■□□□ 1.43
ERCC2-202ENST00000391942 DLC1Q96QB1 1528 aa23.97■■□□□ 1.43
ERCC2-202ENST00000391942 WAPLQ7Z5K2 1190 aa23.97■■□□□ 1.43
ERCC2-202ENST00000391942 POGKQ9P215 609 aa23.97■■□□□ 1.43
ERCC2-202ENST00000391942 TECPR2O15040 1411 aa23.97■■□□□ 1.43
ERCC2-202ENST00000391942 STRCP1A6NGW2 1772 aa23.96■■□□□ 1.43
ERCC2-202ENST00000391942 NWD1Q149M9 1564 aa23.96■■□□□ 1.43
ERCC2-202ENST00000391942 PLEKHH1Q9ULM0 1364 aa23.96■■□□□ 1.43
ERCC2-202ENST00000391942 ZNF335Q9H4Z2 1342 aaPredicted RBP23.95■■□□□ 1.42
ERCC2-202ENST00000391942 CENPJQ9HC77 1338 aaPredicted RBP23.95■■□□□ 1.42
ERCC2-202ENST00000391942 QRICH2Q9H0J4 1663 aa23.94■■□□□ 1.42
ERCC2-202ENST00000391942 PTCH1Q13635 1447 aa23.93■■□□□ 1.42
ERCC2-202ENST00000391942 RBM33Q96EV2 1170 aaKnown RBP23.92■■□□□ 1.42
ERCC2-202ENST00000391942 FAM135BQ49AJ0 1406 aa23.91■■□□□ 1.42
ERCC2-202ENST00000391942 SIRT1Q96EB6 747 aa23.9■■□□□ 1.42
ERCC2-202ENST00000391942 MINK1Q8N4C8 1332 aaPredicted RBP23.89■■□□□ 1.41
ERCC2-202ENST00000391942 PROSER2Q86WR7 435 aaPredicted RBP23.88■■□□□ 1.41
ERCC2-202ENST00000391942 TESK2Q96S53 571 aa23.88■■□□□ 1.41
ERCC2-202ENST00000391942 NKTRP30414 1462 aaKnown RBP23.88■■□□□ 1.41
ERCC2-202ENST00000391942 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms