RNA–Protein interactions for RNA: ENST00000390609.3

IGHV3-23-201, Transcript of immunoglobulin heavy variable 3-23, humanhuman

APPRIS P1 BASIC

Gene IGHV3-23, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-23-201ENST00000390609 MED14O60244 1454 aa23.79■■□□□ 1.4
IGHV3-23-201ENST00000390609 ADGRB3O60242 1522 aa23.78■■□□□ 1.4
IGHV3-23-201ENST00000390609 TRPM2O94759 1503 aa23.76■■□□□ 1.39
IGHV3-23-201ENST00000390609 EID1Q9Y6B2 187 aa23.76■■□□□ 1.39
IGHV3-23-201ENST00000390609 TXNDC2Q86VQ3 553 aa23.75■■□□□ 1.39
IGHV3-23-201ENST00000390609 TMEM2Q9UHN6 1383 aa23.75■■□□□ 1.39
IGHV3-23-201ENST00000390609 ZNF326Q5BKZ1 582 aaKnown RBP23.73■■□□□ 1.39
IGHV3-23-201ENST00000390609 PCGF6Q9BYE7 350 aa23.73■■□□□ 1.39
IGHV3-23-201ENST00000390609 ALKQ9UM73 1620 aa23.73■■□□□ 1.39
IGHV3-23-201ENST00000390609 CLTCL1P53675 1640 aa23.72■■□□□ 1.39
IGHV3-23-201ENST00000390609 KDM5AP29375 1690 aaKnown RBP23.71■■□□□ 1.39
IGHV3-23-201ENST00000390609 LTKP29376 864 aa23.71■■□□□ 1.39
IGHV3-23-201ENST00000390609 IQGAP1P46940 1657 aa23.7■■□□□ 1.39
IGHV3-23-201ENST00000390609 TMEM131LA2VDJ0 1609 aa23.7■■□□□ 1.39
IGHV3-23-201ENST00000390609 CCDC144AA2RUR9 1427 aa23.7■■□□□ 1.38
IGHV3-23-201ENST00000390609 SLIT1O75093 1534 aa23.69■■□□□ 1.38
IGHV3-23-201ENST00000390609 LRRC7Q96NW7 1537 aa23.69■■□□□ 1.38
IGHV3-23-201ENST00000390609 ARHGAP23Q9P227 1491 aa23.69■■□□□ 1.38
IGHV3-23-201ENST00000390609 PPP1R15AO75807 674 aaPredicted RBP23.69■■□□□ 1.38
IGHV3-23-201ENST00000390609 HDGFP51858 240 aaKnown RBP23.69■■□□□ 1.38
IGHV3-23-201ENST00000390609 SCAF11Q99590 1463 aaKnown RBP23.68■■□□□ 1.38
IGHV3-23-201ENST00000390609 NUTM2DQ5VT03 806 aaPredicted RBP23.68■■□□□ 1.38
IGHV3-23-201ENST00000390609 BCANQ96GW7 911 aa23.68■■□□□ 1.38
IGHV3-23-201ENST00000390609 RIMS2Q9UQ26 1411 aa23.67■■□□□ 1.38
IGHV3-23-201ENST00000390609 MYO5BQ9ULV0 1848 aa23.66■■□□□ 1.38
IGHV3-23-201ENST00000390609 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.65■■□□□ 1.38
IGHV3-23-201ENST00000390609 STRCP1A6NGW2 1772 aa23.65■■□□□ 1.38
IGHV3-23-201ENST00000390609 KIF1BO60333 1816 aa23.62■■□□□ 1.37
IGHV3-23-201ENST00000390609 RGL3Q3MIN7 710 aa23.62■■□□□ 1.37
IGHV3-23-201ENST00000390609 ANKRD30BQ9BXX2 1392 aa23.62■■□□□ 1.37
IGHV3-23-201ENST00000390609 ZFYVE9O95405 1425 aa23.61■■□□□ 1.37
IGHV3-23-201ENST00000390609 SLC26A8Q96RN1 970 aa23.56■■□□□ 1.36
IGHV3-23-201ENST00000390609 RGS17Q9UGC6 210 aaPredicted RBP23.56■■□□□ 1.36
IGHV3-23-201ENST00000390609 RPGRIP1LQ68CZ1 1315 aa23.55■■□□□ 1.36
IGHV3-23-201ENST00000390609 PLEKHG1Q9ULL1 1385 aa23.54■■□□□ 1.36
IGHV3-23-201ENST00000390609 DHX57Q6P158 1386 aaKnown RBP23.53■■□□□ 1.36
IGHV3-23-201ENST00000390609 SPATA31E1Q6ZUB1 1445 aa23.53■■□□□ 1.36
IGHV3-23-201ENST00000390609 NEXMIFQ5QGS0 1516 aa23.51■■□□□ 1.35
IGHV3-23-201ENST00000390609 VGFO15240 615 aaPredicted RBP23.51■■□□□ 1.35
IGHV3-23-201ENST00000390609 FAM135BQ49AJ0 1406 aa23.46■■□□□ 1.35
IGHV3-23-201ENST00000390609 NEUROD1Q13562 356 aa23.45■■□□□ 1.34
IGHV3-23-201ENST00000390609 TBX22Q9Y458 520 aa23.45■■□□□ 1.34
IGHV3-23-201ENST00000390609 SIN3AQ96ST3 1273 aa23.44■■□□□ 1.34
IGHV3-23-201ENST00000390609 XIRP1Q702N8 1843 aaKnown RBP23.44■■□□□ 1.34
IGHV3-23-201ENST00000390609 ADAMTS13Q76LX8 1427 aa23.42■■□□□ 1.34
IGHV3-23-201ENST00000390609 TMEM94Q12767 1356 aa23.42■■□□□ 1.34
IGHV3-23-201ENST00000390609 ADGRF5Q8IZF2 1346 aa23.42■■□□□ 1.34
IGHV3-23-201ENST00000390609 POTEAQ6S8J7 498 aa23.42■■□□□ 1.34
IGHV3-23-201ENST00000390609 KDM2AQ9Y2K7 1162 aa23.42■■□□□ 1.34
IGHV3-23-201ENST00000390609 PPLO60437 1756 aa23.42■■□□□ 1.34
IGHV3-23-201ENST00000390609 KCNA6P17658 529 aa23.41■■□□□ 1.34
IGHV3-23-201ENST00000390609 PROSER2Q86WR7 435 aaPredicted RBP23.41■■□□□ 1.34
IGHV3-23-201ENST00000390609 DCAF11Q8TEB1 546 aa23.41■■□□□ 1.34
IGHV3-23-201ENST00000390609 SETBP1Q9Y6X0 1596 aa23.39■■□□□ 1.33
IGHV3-23-201ENST00000390609 RBM33Q96EV2 1170 aaKnown RBP23.37■■□□□ 1.33
IGHV3-23-201ENST00000390609 DIP2AQ14689 1571 aa23.36■■□□□ 1.33
IGHV3-23-201ENST00000390609 NRXN3Q9Y4C0 1643 aa23.35■■□□□ 1.33
IGHV3-23-201ENST00000390609 IFT172Q9UG01 1749 aa23.35■■□□□ 1.33
IGHV3-23-201ENST00000390609 METP08581 1390 aa23.34■■□□□ 1.33
IGHV3-23-201ENST00000390609 PIK3R4Q99570 1358 aa23.33■■□□□ 1.33
IGHV3-23-201ENST00000390609 AMOTL2Q9Y2J4 779 aa23.33■■□□□ 1.33
IGHV3-23-201ENST00000390609 MYOM2P54296 1465 aa23.32■■□□□ 1.32
IGHV3-23-201ENST00000390609 ROBO1Q9Y6N7 1651 aa23.32■■□□□ 1.32
IGHV3-23-201ENST00000390609 STAC3Q96MF2 364 aa23.3■■□□□ 1.32
IGHV3-23-201ENST00000390609 PIK3C2GO75747 1445 aa23.3■■□□□ 1.32
IGHV3-23-201ENST00000390609 CCER1Q8TC90 406 aaPredicted RBP23.29■■□□□ 1.32
IGHV3-23-201ENST00000390609 L3MBTL2Q969R5 705 aa23.29■■□□□ 1.32
IGHV3-23-201ENST00000390609 PTPRUQ92729 1446 aa23.28■■□□□ 1.32
IGHV3-23-201ENST00000390609 CFAP70Q5T0N1 1121 aa23.28■■□□□ 1.32
IGHV3-23-201ENST00000390609 SLAIN2Q9P270 581 aa23.28■■□□□ 1.32
IGHV3-23-201ENST00000390609 MSH6P52701 1360 aa23.27■■□□□ 1.32
IGHV3-23-201ENST00000390609 NWD1Q149M9 1564 aa23.27■■□□□ 1.32
IGHV3-23-201ENST00000390609 NKTRP30414 1462 aaKnown RBP23.26■■□□□ 1.31
IGHV3-23-201ENST00000390609 NRXN1Q9ULB1 1477 aa23.26■■□□□ 1.31
IGHV3-23-201ENST00000390609 TMEM132EQ6IEE7 984 aa23.26■■□□□ 1.31
IGHV3-23-201ENST00000390609 C14orf93Q9H972 538 aaKnown RBP23.26■■□□□ 1.31
IGHV3-23-201ENST00000390609 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
IGHV3-23-201ENST00000390609 STK26Q9P289 416 aa23.25■■□□□ 1.31
IGHV3-23-201ENST00000390609 C14orf37Q86TY3 774 aa23.24■■□□□ 1.31
IGHV3-23-201ENST00000390609 TONSLQ96HA7 1378 aa23.24■■□□□ 1.31
IGHV3-23-201ENST00000390609 JCADQ9P266 1359 aa23.24■■□□□ 1.31
IGHV3-23-201ENST00000390609 SETD1AO15047 1707 aaKnown RBP23.21■■□□□ 1.31
IGHV3-23-201ENST00000390609 PHLPP1O60346 1717 aa23.19■■□□□ 1.3
IGHV3-23-201ENST00000390609 CLSPNQ9HAW4 1339 aa23.18■■□□□ 1.3
IGHV3-23-201ENST00000390609 XRN1Q8IZH2 1706 aaKnown RBP23.18■■□□□ 1.3
IGHV3-23-201ENST00000390609 LAMC1P11047 1609 aa23.17■■□□□ 1.3
IGHV3-23-201ENST00000390609 LRPPRCP42704 1394 aaKnown RBP23.16■■□□□ 1.3
IGHV3-23-201ENST00000390609 ASXL1Q8IXJ9 1541 aa23.16■■□□□ 1.3
IGHV3-23-201ENST00000390609 PRAG1Q86YV5 1406 aa23.16■■□□□ 1.3
IGHV3-23-201ENST00000390609 YTHDC2Q9H6S0 1430 aaKnown RBP23.16■■□□□ 1.3
IGHV3-23-201ENST00000390609 ROBO2Q9HCK4 1378 aa23.14■■□□□ 1.3
IGHV3-23-201ENST00000390609 MEX3CQ5U5Q3 659 aaKnown RBP23.14■■□□□ 1.29
IGHV3-23-201ENST00000390609 PTCH1Q13635 1447 aa23.12■■□□□ 1.29
IGHV3-23-201ENST00000390609 ABCC11Q96J66 1382 aa23.12■■□□□ 1.29
IGHV3-23-201ENST00000390609 SPATA31A6Q5VVP1 1343 aa23.11■■□□□ 1.29
IGHV3-23-201ENST00000390609 NCOA3Q9Y6Q9 1424 aa23.11■■□□□ 1.29
IGHV3-23-201ENST00000390609 ZNF772Q68DY9 489 aaPredicted RBP23.11■■□□□ 1.29
IGHV3-23-201ENST00000390609 TRAK1Q9UPV9 953 aa23.11■■□□□ 1.29
IGHV3-23-201ENST00000390609 NBPF1Q3BBV0 1214 aa23.1■■□□□ 1.29
IGHV3-23-201ENST00000390609 WAPLQ7Z5K2 1190 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms