RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 FAN1Q9Y2M0 1017 aa4.5□□□□□ -1.69
TRAJ17-201ENST00000390520 TMA7Q9Y2S6 64 aaKnown RBP4.5□□□□□ -1.69
TRAJ17-201ENST00000390520 SPDYE2BA6NHP3 402 aa4.49□□□□□ -1.69
TRAJ17-201ENST00000390520 SPDYE5A6NIY4 337 aa4.49□□□□□ -1.69
TRAJ17-201ENST00000390520 CCER2I3L3R5 266 aa4.49□□□□□ -1.69
TRAJ17-201ENST00000390520 U2SURPO15042 1029 aaKnown RBP4.49□□□□□ -1.69
TRAJ17-201ENST00000390520 SH3BP5O60239 455 aa4.49□□□□□ -1.69
TRAJ17-201ENST00000390520 SPDYE6P0CI01 402 aa4.49□□□□□ -1.69
TRAJ17-201ENST00000390520 CALRP27797 417 aaKnown RBP4.49□□□□□ -1.69
TRAJ17-201ENST00000390520 IGBP1P78318 339 aa4.49□□□□□ -1.69
TRAJ17-201ENST00000390520 SPDYE2Q495Y8 402 aa4.49□□□□□ -1.69
TRAJ17-201ENST00000390520 VTI1AQ96AJ9 217 aa4.49□□□□□ -1.69
TRAJ17-201ENST00000390520 CALR3Q96L12 384 aaKnown RBP4.49□□□□□ -1.69
TRAJ17-201ENST00000390520 TBC1D2Q9BYX2 928 aa4.49□□□□□ -1.69
TRAJ17-201ENST00000390520 VRTNQ9H8Y1 702 aa4.49□□□□□ -1.69
TRAJ17-201ENST00000390520 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 CARNS1A5YM72 827 aa4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 PAX3P23760 479 aa4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 DEKP35659 375 aaKnown RBP4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 PTPROQ16827 1216 aa4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 C4orf46Q504U0 113 aa4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 NOM1Q5C9Z4 860 aaKnown RBP4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 WDR78Q5VTH9 848 aa4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 PABPN1Q86U42 306 aaKnown RBP eCLIP4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 PNISRQ8TF01 805 aaKnown RBP4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 ZNF622Q969S3 477 aaKnown RBP eCLIP4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 SPOCK3Q9BQ16 436 aa4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 BCL2L13Q9BXK5 485 aa4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 BRINP2Q9C0B6 783 aa4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 PNMA2Q9UL42 364 aa4.48□□□□□ -1.69
TRAJ17-201ENST00000390520 MINK1Q8N4C8 1332 aaPredicted RBP4.47□□□□□ -1.69
TRAJ17-201ENST00000390520 hCG_2014768A0A024R1R8 64 aa4.47□□□□□ -1.69
TRAJ17-201ENST00000390520 CLGNO14967 610 aa4.47□□□□□ -1.69
TRAJ17-201ENST00000390520 PDAP1Q13442 181 aaKnown RBP4.47□□□□□ -1.69
TRAJ17-201ENST00000390520 HSP90AB2PQ58FF8 381 aa4.47□□□□□ -1.69
TRAJ17-201ENST00000390520 SH3D19Q5HYK7 790 aa4.47□□□□□ -1.69
TRAJ17-201ENST00000390520 NPAS4Q8IUM7 802 aa4.47□□□□□ -1.69
TRAJ17-201ENST00000390520 SPACA7Q96KW9 195 aa4.47□□□□□ -1.69
TRAJ17-201ENST00000390520 CUEDC1Q9NWM3 386 aaPredicted RBP4.47□□□□□ -1.69
TRAJ17-201ENST00000390520 CHPF2Q9P2E5 772 aa4.47□□□□□ -1.69
TRAJ17-201ENST00000390520 COMMD10Q9Y6G5 202 aa4.47□□□□□ -1.69
TRAJ17-201ENST00000390520 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.46□□□□□ -1.7
TRAJ17-201ENST00000390520 TMEM88BA6NKF7 163 aa4.46□□□□□ -1.7
TRAJ17-201ENST00000390520 TTC36A6NLP5 189 aa4.46□□□□□ -1.7
TRAJ17-201ENST00000390520 PPP4CP60510 307 aa4.46□□□□□ -1.7
TRAJ17-201ENST00000390520 OXER1Q8TDS5 423 aa4.46□□□□□ -1.7
TRAJ17-201ENST00000390520 GLMNQ92990 594 aa4.46□□□□□ -1.7
TRAJ17-201ENST00000390520 CCDC85AQ96PX6 553 aaPredicted RBP4.46□□□□□ -1.7
TRAJ17-201ENST00000390520 SENP7Q9BQF6 1050 aa4.46□□□□□ -1.7
TRAJ17-201ENST00000390520 LNPKQ9C0E8 428 aa4.46□□□□□ -1.7
TRAJ17-201ENST00000390520 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.46□□□□□ -1.7
TRAJ17-201ENST00000390520 GNL3LQ9NVN8 582 aaKnown RBP4.46□□□□□ -1.7
TRAJ17-201ENST00000390520 GPR37O15354 613 aa4.45□□□□□ -1.7
TRAJ17-201ENST00000390520 GYS2P54840 703 aa4.45□□□□□ -1.7
TRAJ17-201ENST00000390520 SDE2Q6IQ49 451 aa4.45□□□□□ -1.7
TRAJ17-201ENST00000390520 NBPF11Q86T75 865 aa4.45□□□□□ -1.7
TRAJ17-201ENST00000390520 AMOTL1Q8IY63 956 aa4.45□□□□□ -1.7
TRAJ17-201ENST00000390520 CCER1Q8TC90 406 aaPredicted RBP4.45□□□□□ -1.7
TRAJ17-201ENST00000390520 GIPC2Q8TF65 315 aa4.45□□□□□ -1.7
TRAJ17-201ENST00000390520 NOP58Q9Y2X3 529 aaKnown RBP4.45□□□□□ -1.7
TRAJ17-201ENST00000390520 SALL2Q9Y467 1007 aaPredicted RBP4.45□□□□□ -1.7
TRAJ17-201ENST00000390520 ANP32CO43423 234 aa4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 BDNFP23560 247 aa4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 MLLT3P42568 568 aaPredicted RBP4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 CCDC96Q2M329 555 aa4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 NBPF1Q3BBV0 1214 aa4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 CFAP70Q5T0N1 1121 aa4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 CASC1Q6TDU7 716 aa4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 CCAR1Q8IX12 1150 aaKnown RBP4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 CXorf38Q8TB03 319 aa4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 CCDC102AQ96A19 550 aa4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 SCYL1Q96KG9 808 aa4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 CHMP4BQ9H444 224 aaKnown RBP4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 QTRT2Q9H974 415 aaKnown RBP4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 BSDC1Q9NW68 430 aaPredicted RBP4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 TBX22Q9Y458 520 aa4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 DMRT2Q9Y5R5 561 aa4.44□□□□□ -1.7
TRAJ17-201ENST00000390520 NRDCO43847 1150 aa4.43□□□□□ -1.7
TRAJ17-201ENST00000390520 ZRANB2O95218 330 aaKnown RBP eCLIP4.43□□□□□ -1.7
TRAJ17-201ENST00000390520 KIF4AO95239 1232 aa4.43□□□□□ -1.7
TRAJ17-201ENST00000390520 RECKO95980 971 aa4.43□□□□□ -1.7
TRAJ17-201ENST00000390520 IBSPP21815 317 aaPredicted RBP4.43□□□□□ -1.7
TRAJ17-201ENST00000390520 MMP14P50281 582 aa4.43□□□□□ -1.7
TRAJ17-201ENST00000390520 MAP2K5Q13163 448 aa4.43□□□□□ -1.7
TRAJ17-201ENST00000390520 C11orf96Q7Z7L8 435 aa4.43□□□□□ -1.7
TRAJ17-201ENST00000390520 BANK1Q8NDB2 785 aa4.43□□□□□ -1.7
TRAJ17-201ENST00000390520 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.43□□□□□ -1.7
TRAJ17-201ENST00000390520 SWAP70Q9UH65 585 aa4.43□□□□□ -1.7
TRAJ17-201ENST00000390520 NUB1Q9Y5A7 615 aa4.43□□□□□ -1.7
TRAJ17-201ENST00000390520 IRF6O14896 467 aa4.42□□□□□ -1.7
TRAJ17-201ENST00000390520 EPB41L2O43491 1005 aaKnown RBP4.42□□□□□ -1.7
TRAJ17-201ENST00000390520 C7P10643 843 aa4.42□□□□□ -1.7
TRAJ17-201ENST00000390520 MS4A1P11836 297 aa4.42□□□□□ -1.7
TRAJ17-201ENST00000390520 SSFA2P28290 1259 aa4.42□□□□□ -1.7
TRAJ17-201ENST00000390520 COPB2P35606 906 aa4.42□□□□□ -1.7
TRAJ17-201ENST00000390520 MARSP56192 900 aaKnown RBP4.42□□□□□ -1.7
TRAJ17-201ENST00000390520 XPCQ01831 940 aaPredicted RBP4.42□□□□□ -1.7
TRAJ17-201ENST00000390520 ZNF280DQ6N043 979 aa4.42□□□□□ -1.7
TRAJ17-201ENST00000390520 NLGN1Q8N2Q7 840 aa4.42□□□□□ -1.7
TRAJ17-201ENST00000390520 MKL1Q969V6 931 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms