RNA–Protein interactions for RNA: ENST00000390353.2

TRBV6-1-201, Transcript of T cell receptor beta variable 6-1, humanhuman

APPRIS P1 BASIC

Gene TRBV6-1, Length 401 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1-201ENST00000390353 ALKQ9UM73 1620 aa12.71□□□□□ -0.37
TRBV6-1-201ENST00000390353 SENP3Q9H4L4 574 aaPredicted RBP12.7□□□□□ -0.38
TRBV6-1-201ENST00000390353 RIMS2Q9UQ26 1411 aa12.69□□□□□ -0.38
TRBV6-1-201ENST00000390353 TET3O43151 1660 aa12.68□□□□□ -0.38
TRBV6-1-201ENST00000390353 CHGAP10645 457 aaKnown RBP12.68□□□□□ -0.38
TRBV6-1-201ENST00000390353 TBX22Q9Y458 520 aa12.68□□□□□ -0.38
TRBV6-1-201ENST00000390353 STRCP1A6NGW2 1772 aa12.68□□□□□ -0.38
TRBV6-1-201ENST00000390353 NUP155O75694 1391 aa12.68□□□□□ -0.38
TRBV6-1-201ENST00000390353 CFAP65Q6ZU64 1925 aaKnown RBP12.67□□□□□ -0.38
TRBV6-1-201ENST00000390353 ZFYVE9O95405 1425 aa12.67□□□□□ -0.38
TRBV6-1-201ENST00000390353 NCOA3Q9Y6Q9 1424 aa12.67□□□□□ -0.38
TRBV6-1-201ENST00000390353 C14orf37Q86TY3 774 aa12.66□□□□□ -0.38
TRBV6-1-201ENST00000390353 SLAIN2Q9P270 581 aa12.66□□□□□ -0.38
TRBV6-1-201ENST00000390353 PIK3R4Q99570 1358 aa12.66□□□□□ -0.38
TRBV6-1-201ENST00000390353 UNC13BO14795 1591 aa12.65□□□□□ -0.38
TRBV6-1-201ENST00000390353 NWD1Q149M9 1564 aa12.64□□□□□ -0.39
TRBV6-1-201ENST00000390353 ITGAEP38570 1179 aa12.64□□□□□ -0.39
TRBV6-1-201ENST00000390353 CADPS2Q86UW7 1296 aa12.63□□□□□ -0.39
TRBV6-1-201ENST00000390353 ATF3P18847 181 aa12.62□□□□□ -0.39
TRBV6-1-201ENST00000390353 C19orf44Q9H6X5 657 aa12.62□□□□□ -0.39
TRBV6-1-201ENST00000390353 GCC2Q8IWJ2 1684 aa12.61□□□□□ -0.39
TRBV6-1-201ENST00000390353 DIP2AQ14689 1571 aa12.61□□□□□ -0.39
TRBV6-1-201ENST00000390353 RBM33Q96EV2 1170 aaKnown RBP12.61□□□□□ -0.39
TRBV6-1-201ENST00000390353 TMEM131LA2VDJ0 1609 aa12.61□□□□□ -0.39
TRBV6-1-201ENST00000390353 JCADQ9P266 1359 aa12.6□□□□□ -0.39
TRBV6-1-201ENST00000390353 IQGAP3Q86VI3 1631 aa12.6□□□□□ -0.39
TRBV6-1-201ENST00000390353 ZNF326Q5BKZ1 582 aaKnown RBP12.59□□□□□ -0.39
TRBV6-1-201ENST00000390353 NUTM2DQ5VT03 806 aaPredicted RBP12.58□□□□□ -0.4
TRBV6-1-201ENST00000390353 ADAMTS13Q76LX8 1427 aa12.58□□□□□ -0.4
TRBV6-1-201ENST00000390353 AMOTL2Q9Y2J4 779 aa12.58□□□□□ -0.4
TRBV6-1-201ENST00000390353 TRPM2O94759 1503 aa12.57□□□□□ -0.4
TRBV6-1-201ENST00000390353 ROBO1Q9Y6N7 1651 aa12.57□□□□□ -0.4
TRBV6-1-201ENST00000390353 SPATA31A6Q5VVP1 1343 aa12.57□□□□□ -0.4
TRBV6-1-201ENST00000390353 XIRP1Q702N8 1843 aaKnown RBP12.56□□□□□ -0.4
TRBV6-1-201ENST00000390353 DCCP43146 1447 aa12.55□□□□□ -0.4
TRBV6-1-201ENST00000390353 E9PCH4 1651 aa12.55□□□□□ -0.4
TRBV6-1-201ENST00000390353 RGS17Q9UGC6 210 aaPredicted RBP12.55□□□□□ -0.4
TRBV6-1-201ENST00000390353 MEX3CQ5U5Q3 659 aaKnown RBP12.53□□□□□ -0.4
TRBV6-1-201ENST00000390353 PPARGC1BQ86YN6 1023 aaKnown RBP12.53□□□□□ -0.4
TRBV6-1-201ENST00000390353 RRBP1Q9P2E9 1410 aaKnown RBP12.53□□□□□ -0.4
TRBV6-1-201ENST00000390353 VGFO15240 615 aaPredicted RBP12.52□□□□□ -0.41
TRBV6-1-201ENST00000390353 ZNF772Q68DY9 489 aaPredicted RBP12.52□□□□□ -0.41
TRBV6-1-201ENST00000390353 CHD2O14647 1828 aaKnown RBP12.52□□□□□ -0.41
TRBV6-1-201ENST00000390353 SETBP1Q9Y6X0 1596 aa12.51□□□□□ -0.41
TRBV6-1-201ENST00000390353 POTEAQ6S8J7 498 aa12.5□□□□□ -0.41
TRBV6-1-201ENST00000390353 TRIM52Q96A61 297 aa12.5□□□□□ -0.41
TRBV6-1-201ENST00000390353 RPGRIP1LQ68CZ1 1315 aa12.5□□□□□ -0.41
TRBV6-1-201ENST00000390353 NAIPQ13075 1403 aa12.49□□□□□ -0.41
TRBV6-1-201ENST00000390353 BRINP3Q76B58 766 aa12.49□□□□□ -0.41
TRBV6-1-201ENST00000390353 PHLPP1O60346 1717 aa12.48□□□□□ -0.41
TRBV6-1-201ENST00000390353 HFM1A2PYH4 1435 aa12.48□□□□□ -0.41
TRBV6-1-201ENST00000390353 PTPRUQ92729 1446 aa12.48□□□□□ -0.41
TRBV6-1-201ENST00000390353 ACIN1Q9UKV3 1341 aaKnown RBP12.48□□□□□ -0.41
TRBV6-1-201ENST00000390353 LRRC59Q96AG4 307 aaKnown RBP12.48□□□□□ -0.41
TRBV6-1-201ENST00000390353 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
TRBV6-1-201ENST00000390353 AHDC1Q5TGY3 1603 aaPredicted RBP12.48□□□□□ -0.41
TRBV6-1-201ENST00000390353 METP08581 1390 aa12.47□□□□□ -0.41
TRBV6-1-201ENST00000390353 MYO5BQ9ULV0 1848 aa12.47□□□□□ -0.41
TRBV6-1-201ENST00000390353 ADGRL3Q9HAR2 1447 aa12.46□□□□□ -0.41
TRBV6-1-201ENST00000390353 SPHKAPQ2M3C7 1700 aa12.46□□□□□ -0.41
TRBV6-1-201ENST00000390353 COL16A1Q07092 1604 aaPredicted RBP12.46□□□□□ -0.41
TRBV6-1-201ENST00000390353 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.45□□□□□ -0.42
TRBV6-1-201ENST00000390353 PTCH1Q13635 1447 aa12.45□□□□□ -0.42
TRBV6-1-201ENST00000390353 ASXL1Q8IXJ9 1541 aa12.44□□□□□ -0.42
TRBV6-1-201ENST00000390353 MST1RQ04912 1400 aa12.44□□□□□ -0.42
TRBV6-1-201ENST00000390353 SETD5Q9C0A6 1442 aa12.44□□□□□ -0.42
TRBV6-1-201ENST00000390353 XRN1Q8IZH2 1706 aaKnown RBP12.43□□□□□ -0.42
TRBV6-1-201ENST00000390353 NEXMIFQ5QGS0 1516 aa12.42□□□□□ -0.42
TRBV6-1-201ENST00000390353 NUTM2BA6NNL0 878 aaPredicted RBP12.42□□□□□ -0.42
TRBV6-1-201ENST00000390353 NUTM2EB1AL46 878 aaPredicted RBP12.42□□□□□ -0.42
TRBV6-1-201ENST00000390353 RXRBP28702 533 aa12.42□□□□□ -0.42
TRBV6-1-201ENST00000390353 NUTM2AQ8IVF1 878 aaPredicted RBP12.42□□□□□ -0.42
TRBV6-1-201ENST00000390353 CLTCL1P53675 1640 aa12.41□□□□□ -0.42
TRBV6-1-201ENST00000390353 NRXN3Q9Y4C0 1643 aa12.41□□□□□ -0.42
TRBV6-1-201ENST00000390353 PRAG1Q86YV5 1406 aa12.41□□□□□ -0.42
TRBV6-1-201ENST00000390353 LRP6O75581 1613 aa12.4□□□□□ -0.42
TRBV6-1-201ENST00000390353 CCDC144AA2RUR9 1427 aa12.4□□□□□ -0.42
TRBV6-1-201ENST00000390353 SHPRHQ149N8 1683 aa12.4□□□□□ -0.42
TRBV6-1-201ENST00000390353 ANKRD30BQ9BXX2 1392 aa12.39□□□□□ -0.43
TRBV6-1-201ENST00000390353 ROBO2Q9HCK4 1378 aa12.38□□□□□ -0.43
TRBV6-1-201ENST00000390353 C1orf167Q5SNV9 1468 aa12.38□□□□□ -0.43
TRBV6-1-201ENST00000390353 CDK12Q9NYV4 1490 aaPredicted RBP12.38□□□□□ -0.43
TRBV6-1-201ENST00000390353 AFF2P51816 1311 aa12.37□□□□□ -0.43
TRBV6-1-201ENST00000390353 PNPLA6Q8IY17 1366 aa12.37□□□□□ -0.43
TRBV6-1-201ENST00000390353 LRPPRCP42704 1394 aaKnown RBP12.36□□□□□ -0.43
TRBV6-1-201ENST00000390353 NGLY1Q96IV0 654 aa12.36□□□□□ -0.43
TRBV6-1-201ENST00000390353 C8orf37Q96NL8 207 aa12.36□□□□□ -0.43
TRBV6-1-201ENST00000390353 KIF1BO60333 1816 aa12.36□□□□□ -0.43
TRBV6-1-201ENST00000390353 NPHP3Q7Z494 1330 aa12.36□□□□□ -0.43
TRBV6-1-201ENST00000390353 RBM6P78332 1123 aaKnown RBP12.35□□□□□ -0.43
TRBV6-1-201ENST00000390353 MPHOSPH9Q99550 1183 aa12.35□□□□□ -0.43
TRBV6-1-201ENST00000390353 SOS2Q07890 1332 aaPredicted RBP12.35□□□□□ -0.43
TRBV6-1-201ENST00000390353 QTRT2Q9H974 415 aaKnown RBP12.34□□□□□ -0.43
TRBV6-1-201ENST00000390353 NHSL1Q5SYE7 1610 aa12.33□□□□□ -0.43
TRBV6-1-201ENST00000390353 RGL3Q3MIN7 710 aa12.33□□□□□ -0.44
TRBV6-1-201ENST00000390353 ESCO1Q5FWF5 840 aa12.33□□□□□ -0.44
TRBV6-1-201ENST00000390353 DDX17Q92841 729 aaKnown RBP12.33□□□□□ -0.44
TRBV6-1-201ENST00000390353 ORAI2Q96SN7 254 aa12.33□□□□□ -0.44
TRBV6-1-201ENST00000390353 ADAMTS2O95450 1211 aa12.32□□□□□ -0.44
TRBV6-1-201ENST00000390353 UPF1Q92900 1129 aaKnown RBP eCLIP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms