RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 EIF2S2P20042 333 aaKnown RBP12.86□□□□□ -0.35
PKP4-201ENST00000389757 RIPK4P57078 832 aa12.86□□□□□ -0.35
PKP4-201ENST00000389757 NGEFQ8N5V2 710 aa12.86□□□□□ -0.35
PKP4-201ENST00000389757 PRAM1Q96QH2 718 aa12.86□□□□□ -0.35
PKP4-201ENST00000389757 CDK13Q14004 1512 aaKnown RBP12.85□□□□□ -0.35
PKP4-201ENST00000389757 ABTB2Q8N961 1025 aa12.84□□□□□ -0.35
PKP4-201ENST00000389757 CUL7Q14999 1698 aa12.84□□□□□ -0.35
PKP4-201ENST00000389757 KIAA1107Q9UPP5 1409 aa12.84□□□□□ -0.35
PKP4-201ENST00000389757 KIF7Q2M1P5 1343 aa12.84□□□□□ -0.35
PKP4-201ENST00000389757 URB2Q14146 1524 aaKnown RBP12.84□□□□□ -0.35
PKP4-201ENST00000389757 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
PKP4-201ENST00000389757 BCL2L13Q9BXK5 485 aa12.84□□□□□ -0.35
PKP4-201ENST00000389757 DAPK1P53355 1430 aa12.83□□□□□ -0.35
PKP4-201ENST00000389757 TIAM1Q13009 1591 aa12.83□□□□□ -0.36
PKP4-201ENST00000389757 CCDC7Q96M83 1385 aa12.83□□□□□ -0.36
PKP4-201ENST00000389757 RUNDC1Q96C34 613 aa12.83□□□□□ -0.36
PKP4-201ENST00000389757 DDX58O95786 925 aaKnown RBP12.82□□□□□ -0.36
PKP4-201ENST00000389757 RPGRIP1LQ68CZ1 1315 aa12.82□□□□□ -0.36
PKP4-201ENST00000389757 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
PKP4-201ENST00000389757 TCERG1O14776 1098 aaKnown RBP12.81□□□□□ -0.36
PKP4-201ENST00000389757 HMOX1P09601 288 aa12.81□□□□□ -0.36
PKP4-201ENST00000389757 ARHGEF11O15085 1522 aa12.81□□□□□ -0.36
PKP4-201ENST00000389757 SUPT6HQ7KZ85 1726 aaKnown RBP12.81□□□□□ -0.36
PKP4-201ENST00000389757 PLB1Q6P1J6 1458 aa12.81□□□□□ -0.36
PKP4-201ENST00000389757 SLC26A8Q96RN1 970 aa12.81□□□□□ -0.36
PKP4-201ENST00000389757 C9orf78Q9NZ63 289 aaPredicted RBP12.81□□□□□ -0.36
PKP4-201ENST00000389757 NOP58Q9Y2X3 529 aaKnown RBP12.81□□□□□ -0.36
PKP4-201ENST00000389757 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
PKP4-201ENST00000389757 ZNF608Q9ULD9 1512 aaPredicted RBP12.8□□□□□ -0.36
PKP4-201ENST00000389757 SPRYD3Q8NCJ5 442 aa12.8□□□□□ -0.36
PKP4-201ENST00000389757 TSPYL4Q9UJ04 414 aa12.8□□□□□ -0.36
PKP4-201ENST00000389757 GNAI1P63096 354 aa12.79□□□□□ -0.36
PKP4-201ENST00000389757 NECTIN2Q92692 538 aa12.79□□□□□ -0.36
PKP4-201ENST00000389757 GOLGA6L6A8MZA4 724 aa12.79□□□□□ -0.36
PKP4-201ENST00000389757 CCDC141Q6ZP82 1450 aa12.79□□□□□ -0.36
PKP4-201ENST00000389757 API5Q9BZZ5 524 aaKnown RBP12.79□□□□□ -0.36
PKP4-201ENST00000389757 NBPF1Q3BBV0 1214 aa12.79□□□□□ -0.36
PKP4-201ENST00000389757 ERBINQ96RT1 1412 aa12.78□□□□□ -0.36
PKP4-201ENST00000389757 ANKRD30BQ9BXX2 1392 aa12.78□□□□□ -0.36
PKP4-201ENST00000389757 MFAP1P55081 439 aaKnown RBP12.78□□□□□ -0.36
PKP4-201ENST00000389757 CDK19Q9BWU1 502 aa12.78□□□□□ -0.36
PKP4-201ENST00000389757 ADGRL1O94910 1474 aa12.78□□□□□ -0.36
PKP4-201ENST00000389757 ZNF692Q9BU19 519 aaPredicted RBP12.78□□□□□ -0.36
PKP4-201ENST00000389757 TOMM22Q9NS69 142 aa12.78□□□□□ -0.36
PKP4-201ENST00000389757 FKBP5Q13451 457 aaPredicted RBP12.77□□□□□ -0.36
PKP4-201ENST00000389757 USP35Q9P2H5 1018 aa12.77□□□□□ -0.36
PKP4-201ENST00000389757 ZBED9Q6R2W3 1325 aa12.77□□□□□ -0.37
PKP4-201ENST00000389757 HSP90B1P14625 803 aaKnown RBP12.77□□□□□ -0.37
PKP4-201ENST00000389757 MTHFSP49914 203 aa12.77□□□□□ -0.37
PKP4-201ENST00000389757 NRDCO43847 1150 aa12.76□□□□□ -0.37
PKP4-201ENST00000389757 PHF23Q9BUL5 403 aaPredicted RBP12.76□□□□□ -0.37
PKP4-201ENST00000389757 RTEL1-TNFRSF6BF6WH68 1400 aa12.75□□□□□ -0.37
PKP4-201ENST00000389757 CLSTN1O94985 981 aa12.75□□□□□ -0.37
PKP4-201ENST00000389757 STRN4Q9NRL3 753 aa12.75□□□□□ -0.37
PKP4-201ENST00000389757 CABP1Q9NZU7 370 aa12.75□□□□□ -0.37
PKP4-201ENST00000389757 HTATSF1O43719 755 aaKnown RBP12.75□□□□□ -0.37
PKP4-201ENST00000389757 PLEKHO1Q53GL0 409 aaPredicted RBP12.75□□□□□ -0.37
PKP4-201ENST00000389757 GAS2L2Q8NHY3 880 aa12.75□□□□□ -0.37
PKP4-201ENST00000389757 SMG6Q86US8 1419 aaKnown RBP12.75□□□□□ -0.37
PKP4-201ENST00000389757 CNTLNQ9NXG0 1405 aa12.75□□□□□ -0.37
PKP4-201ENST00000389757 ROCK1Q13464 1354 aa12.74□□□□□ -0.37
PKP4-201ENST00000389757 KIF14Q15058 1648 aa12.74□□□□□ -0.37
PKP4-201ENST00000389757 ANKRD45Q5TZF3 282 aa12.74□□□□□ -0.37
PKP4-201ENST00000389757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.74□□□□□ -0.373e-7■■■■□ 24.5
PKP4-201ENST00000389757 DDX19BQ9UMR2 479 aa12.74□□□□□ -0.37
PKP4-201ENST00000389757 LRRFIP1Q32MZ4 808 aaKnown RBP12.74□□□□□ -0.37
PKP4-201ENST00000389757 COG6Q9Y2V7 657 aa12.74□□□□□ -0.37
PKP4-201ENST00000389757 SLC12A5Q9H2X9 1139 aa12.73□□□□□ -0.37
PKP4-201ENST00000389757 PLIN1O60240 522 aa12.73□□□□□ -0.37
PKP4-201ENST00000389757 DNTTIP2Q5QJE6 756 aaKnown RBP12.73□□□□□ -0.37
PKP4-201ENST00000389757 DZIP1LQ8IYY4 767 aaKnown RBP12.72□□□□□ -0.37
PKP4-201ENST00000389757 RILPL2Q969X0 211 aa12.72□□□□□ -0.37
PKP4-201ENST00000389757 PCF11O94913 1555 aaKnown RBP12.72□□□□□ -0.37
PKP4-201ENST00000389757 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
PKP4-201ENST00000389757 CAMSAP2Q08AD1 1489 aa12.72□□□□□ -0.37
PKP4-201ENST00000389757 NUTM2BA6NNL0 878 aaPredicted RBP12.72□□□□□ -0.37
PKP4-201ENST00000389757 NUTM2EB1AL46 878 aaPredicted RBP12.72□□□□□ -0.37
PKP4-201ENST00000389757 TATP17735 454 aaPredicted RBP12.72□□□□□ -0.37
PKP4-201ENST00000389757 NUTM2AQ8IVF1 878 aaPredicted RBP12.72□□□□□ -0.37
PKP4-201ENST00000389757 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
PKP4-201ENST00000389757 KIF16BQ96L93 1317 aa12.72□□□□□ -0.37
PKP4-201ENST00000389757 RIC3Q7Z5B4 369 aa12.71□□□□□ -0.37
PKP4-201ENST00000389757 CENPQQ7L2Z9 268 aaPredicted RBP12.71□□□□□ -0.37
PKP4-201ENST00000389757 DENND4BO75064 1496 aaPredicted RBP12.71□□□□□ -0.37
PKP4-201ENST00000389757 VPS37DQ86XT2 251 aa12.71□□□□□ -0.38
PKP4-201ENST00000389757 GBP4Q96PP9 640 aa12.71□□□□□ -0.38
PKP4-201ENST00000389757 WASHC2AQ641Q2 1341 aa12.7□□□□□ -0.38
PKP4-201ENST00000389757 AIMP1Q12904 312 aaKnown RBP12.7□□□□□ -0.38
PKP4-201ENST00000389757 G3BP1Q13283 466 aaKnown RBP eCLIP12.7□□□□□ -0.38
PKP4-201ENST00000389757 TOM1L2Q6ZVM7 507 aa12.7□□□□□ -0.38
PKP4-201ENST00000389757 ATAD2Q6PL18 1390 aa12.7□□□□□ -0.38
PKP4-201ENST00000389757 PIP4K2BP78356 416 aa12.7□□□□□ -0.38
PKP4-201ENST00000389757 IFIT2P09913 472 aaKnown RBP12.69□□□□□ -0.38
PKP4-201ENST00000389757 PRKAR2BP31323 418 aa12.69□□□□□ -0.38
PKP4-201ENST00000389757 BRD4O60885 1362 aaPredicted RBP12.69□□□□□ -0.38
PKP4-201ENST00000389757 NBPF8Q3BBV2 869 aa12.69□□□□□ -0.38
PKP4-201ENST00000389757 PRDM11Q9NQV5 511 aa12.69□□□□□ -0.38
PKP4-201ENST00000389757 PPP2R1AP30153 589 aa12.69□□□□□ -0.38
PKP4-201ENST00000389757 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
PKP4-201ENST00000389757 AKNAQ7Z591 1439 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms