RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 CHGAP10645 457 aaKnown RBP38.98■■■■□ 3.83
KRT18-201ENST00000388835 XIRP1Q702N8 1843 aaKnown RBP38.97■■■■□ 3.83
KRT18-201ENST00000388835 TMEM131LA2VDJ0 1609 aa38.97■■■■□ 3.83
KRT18-201ENST00000388835 ZFYVE9O95405 1425 aa38.92■■■■□ 3.82
KRT18-201ENST00000388835 RIMS2Q9UQ26 1411 aa38.92■■■■□ 3.82
KRT18-201ENST00000388835 RRBP1Q9P2E9 1410 aaKnown RBP38.92■■■■□ 3.82
KRT18-201ENST00000388835 PPP1R15AO75807 674 aaPredicted RBP38.91■■■■□ 3.82
KRT18-201ENST00000388835 KCNA6P17658 529 aa38.91■■■■□ 3.82
KRT18-201ENST00000388835 HDGFP51858 240 aaKnown RBP38.87■■■■□ 3.81
KRT18-201ENST00000388835 TMEM94Q12767 1356 aa38.85■■■■□ 3.81
KRT18-201ENST00000388835 PLEKHG1Q9ULL1 1385 aa38.85■■■■□ 3.81
KRT18-201ENST00000388835 PROSER2Q86WR7 435 aaPredicted RBP38.84■■■■□ 3.81
KRT18-201ENST00000388835 NUTM2DQ5VT03 806 aaPredicted RBP38.83■■■■□ 3.81
KRT18-201ENST00000388835 RBM33Q96EV2 1170 aaKnown RBP38.83■■■■□ 3.81
KRT18-201ENST00000388835 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.79■■■■□ 3.8
KRT18-201ENST00000388835 NWD1Q149M9 1564 aa38.78■■■■□ 3.8
KRT18-201ENST00000388835 MED1Q15648 1581 aaPredicted RBP38.76■■■■□ 3.79
KRT18-201ENST00000388835 SPHKAPQ2M3C7 1700 aa38.75■■■■□ 3.79
KRT18-201ENST00000388835 NKTRP30414 1462 aaKnown RBP38.75■■■■□ 3.79
KRT18-201ENST00000388835 NAIPQ13075 1403 aa38.74■■■■□ 3.79
KRT18-201ENST00000388835 CHD2O14647 1828 aaKnown RBP38.73■■■■□ 3.79
KRT18-201ENST00000388835 TBX22Q9Y458 520 aa38.69■■■■□ 3.78
KRT18-201ENST00000388835 ADAMTS13Q76LX8 1427 aa38.66■■■■□ 3.78
KRT18-201ENST00000388835 SOCS7O14512 581 aa38.65■■■■□ 3.78
KRT18-201ENST00000388835 MSH6P52701 1360 aa38.62■■■■□ 3.77
KRT18-201ENST00000388835 TRIM52Q96A61 297 aa38.61■■■■□ 3.77
KRT18-201ENST00000388835 FAM135BQ49AJ0 1406 aa38.61■■■■□ 3.77
KRT18-201ENST00000388835 ZNF326Q5BKZ1 582 aaKnown RBP38.61■■■■□ 3.77
KRT18-201ENST00000388835 DIP2AQ14689 1571 aa38.61■■■■□ 3.77
KRT18-201ENST00000388835 HFM1A2PYH4 1435 aa38.59■■■■□ 3.77
KRT18-201ENST00000388835 ROBO1Q9Y6N7 1651 aa38.57■■■■□ 3.77
KRT18-201ENST00000388835 CLTCL1P53675 1640 aa38.57■■■■□ 3.77
KRT18-201ENST00000388835 TRPM2O94759 1503 aa38.54■■■■□ 3.76
KRT18-201ENST00000388835 PHF23Q9BUL5 403 aaPredicted RBP38.53■■■■□ 3.76
KRT18-201ENST00000388835 C14orf37Q86TY3 774 aa38.52■■■■□ 3.76
KRT18-201ENST00000388835 PIK3R4Q99570 1358 aa38.52■■■■□ 3.76
KRT18-201ENST00000388835 KIF1BO60333 1816 aa38.49■■■■□ 3.75
KRT18-201ENST00000388835 SLAIN2Q9P270 581 aa38.48■■■■□ 3.75
KRT18-201ENST00000388835 NRXN3Q9Y4C0 1643 aa38.48■■■■□ 3.75
KRT18-201ENST00000388835 AMOTL2Q9Y2J4 779 aa38.47■■■■□ 3.75
KRT18-201ENST00000388835 PTPRUQ92729 1446 aa38.46■■■■□ 3.75
KRT18-201ENST00000388835 SLC4A1APQ9BWU0 796 aaKnown RBP38.46■■■■□ 3.75
KRT18-201ENST00000388835 SETBP1Q9Y6X0 1596 aa38.44■■■■□ 3.74
KRT18-201ENST00000388835 NCOA3Q9Y6Q9 1424 aa38.44■■■■□ 3.74
KRT18-201ENST00000388835 NEXMIFQ5QGS0 1516 aa38.42■■■■□ 3.74
KRT18-201ENST00000388835 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.4■■■■□ 3.74
KRT18-201ENST00000388835 C19orf44Q9H6X5 657 aa38.36■■■■□ 3.73
KRT18-201ENST00000388835 PHLPP1O60346 1717 aa38.36■■■■□ 3.73
KRT18-201ENST00000388835 METP08581 1390 aa38.35■■■■□ 3.73
KRT18-201ENST00000388835 XRN1Q8IZH2 1706 aaKnown RBP38.34■■■■□ 3.73
KRT18-201ENST00000388835 ATF3P18847 181 aa38.34■■■■□ 3.73
KRT18-201ENST00000388835 FOXD1Q16676 465 aa38.32■■■■□ 3.73
KRT18-201ENST00000388835 CADPS2Q86UW7 1296 aa38.32■■■■□ 3.73
KRT18-201ENST00000388835 VGFO15240 615 aaPredicted RBP38.24■■■■□ 3.71
KRT18-201ENST00000388835 RGS17Q9UGC6 210 aaPredicted RBP38.22■■■■□ 3.71
KRT18-201ENST00000388835 COL16A1Q07092 1604 aaPredicted RBP38.2■■■■□ 3.71
KRT18-201ENST00000388835 PPLO60437 1756 aa38.19■■■■□ 3.7
KRT18-201ENST00000388835 RPGRIP1LQ68CZ1 1315 aa38.19■■■■□ 3.7
KRT18-201ENST00000388835 MPHOSPH9Q99550 1183 aa38.19■■■■□ 3.7
KRT18-201ENST00000388835 JCADQ9P266 1359 aa38.18■■■■□ 3.7
KRT18-201ENST00000388835 DCCP43146 1447 aa38.16■■■■□ 3.7
KRT18-201ENST00000388835 SETD1AO15047 1707 aaKnown RBP38.15■■■■□ 3.7
KRT18-201ENST00000388835 BRINP3Q76B58 766 aa38.14■■■■□ 3.7
KRT18-201ENST00000388835 CCDC144AA2RUR9 1427 aa38.14■■■■□ 3.7
KRT18-201ENST00000388835 AHDC1Q5TGY3 1603 aaPredicted RBP38.12■■■■□ 3.69
KRT18-201ENST00000388835 NALCNQ8IZF0 1738 aa38.11■■■■□ 3.69
KRT18-201ENST00000388835 ADGRL3Q9HAR2 1447 aa38.1■■■■□ 3.69
KRT18-201ENST00000388835 MST1RQ04912 1400 aa38.09■■■■□ 3.69
KRT18-201ENST00000388835 RGL3Q3MIN7 710 aa38.09■■■■□ 3.69
KRT18-201ENST00000388835 SETD5Q9C0A6 1442 aa38.06■■■■□ 3.68
KRT18-201ENST00000388835 ASXL1Q8IXJ9 1541 aa38.05■■■■□ 3.68
KRT18-201ENST00000388835 ROBO2Q9HCK4 1378 aa38.04■■■■□ 3.68
KRT18-201ENST00000388835 PTCH1Q13635 1447 aa38.03■■■■□ 3.68
KRT18-201ENST00000388835 POTEAQ6S8J7 498 aa38.02■■■■□ 3.68
KRT18-201ENST00000388835 ADGRF5Q8IZF2 1346 aa38.01■■■■□ 3.68
KRT18-201ENST00000388835 SPATA31E1Q6ZUB1 1445 aa38.01■■■■□ 3.68
KRT18-201ENST00000388835 SHPRHQ149N8 1683 aa37.98■■■■□ 3.67
KRT18-201ENST00000388835 SPATA31A6Q5VVP1 1343 aa37.98■■■■□ 3.67
KRT18-201ENST00000388835 LRP6O75581 1613 aa37.97■■■■□ 3.67
KRT18-201ENST00000388835 IFT172Q9UG01 1749 aa37.96■■■■□ 3.67
KRT18-201ENST00000388835 NHSL1Q5SYE7 1610 aa37.95■■■■□ 3.67
KRT18-201ENST00000388835 MEX3CQ5U5Q3 659 aaKnown RBP37.94■■■■□ 3.66
KRT18-201ENST00000388835 DDX17Q92841 729 aaKnown RBP37.94■■■■□ 3.66
KRT18-201ENST00000388835 ACIN1Q9UKV3 1341 aaKnown RBP37.94■■■■□ 3.66
KRT18-201ENST00000388835 ANKRD30BQ9BXX2 1392 aa37.92■■■■□ 3.66
KRT18-201ENST00000388835 RAB3GAP2Q9H2M9 1393 aa37.92■■■■□ 3.66
KRT18-201ENST00000388835 PRAG1Q86YV5 1406 aa37.92■■■■□ 3.66
KRT18-201ENST00000388835 C1orf167Q5SNV9 1468 aa37.9■■■■□ 3.66
KRT18-201ENST00000388835 NUTM2BA6NNL0 878 aaPredicted RBP37.89■■■■□ 3.66
KRT18-201ENST00000388835 NUTM2EB1AL46 878 aaPredicted RBP37.89■■■■□ 3.66
KRT18-201ENST00000388835 NUTM2AQ8IVF1 878 aaPredicted RBP37.89■■■■□ 3.66
KRT18-201ENST00000388835 STK26Q9P289 416 aa37.89■■■■□ 3.66
KRT18-201ENST00000388835 LRRC59Q96AG4 307 aaKnown RBP37.84■■■■□ 3.65
KRT18-201ENST00000388835 TMEM132EQ6IEE7 984 aa37.83■■■■□ 3.65
KRT18-201ENST00000388835 ORAI2Q96SN7 254 aa37.83■■■■□ 3.65
KRT18-201ENST00000388835 PIK3C2GO75747 1445 aa37.81■■■■□ 3.64
KRT18-201ENST00000388835 WAPLQ7Z5K2 1190 aa37.78■■■■□ 3.64
KRT18-201ENST00000388835 LRPPRCP42704 1394 aaKnown RBP37.78■■■■□ 3.64
KRT18-201ENST00000388835 TECPR2O15040 1411 aa37.74■■■■□ 3.63
KRT18-201ENST00000388835 PNPLA6Q8IY17 1366 aa37.74■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms