RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 SENP3Q9H4L4 574 aaPredicted RBP27.6■■■□□ 2.01
RPUSD3-201ENST00000383820 ROCK1Q13464 1354 aa27.59■■■□□ 2.01
RPUSD3-201ENST00000383820 ZFYVE9O95405 1425 aa27.58■■■□□ 2.01
RPUSD3-201ENST00000383820 HDGFP51858 240 aaKnown RBP27.58■■■□□ 2.01
RPUSD3-201ENST00000383820 PROSER2Q86WR7 435 aaPredicted RBP27.58■■■□□ 2.01
RPUSD3-201ENST00000383820 PLEKHG1Q9ULL1 1385 aa27.56■■■□□ 2
RPUSD3-201ENST00000383820 TMEM131LA2VDJ0 1609 aa27.56■■■□□ 2
RPUSD3-201ENST00000383820 MYO5BQ9ULV0 1848 aa27.55■■■□□ 2
RPUSD3-201ENST00000383820 BCANQ96GW7 911 aa27.54■■■□□ 2
RPUSD3-201ENST00000383820 RIMS2Q9UQ26 1411 aa27.54■■■□□ 2
RPUSD3-201ENST00000383820 E9PCH4 1651 aa27.51■■□□□ 1.99
RPUSD3-201ENST00000383820 IQGAP3Q86VI3 1631 aa27.51■■□□□ 1.99
RPUSD3-201ENST00000383820 PPP1R15AO75807 674 aaPredicted RBP27.5■■□□□ 1.99
RPUSD3-201ENST00000383820 CHD2O14647 1828 aaKnown RBP27.5■■□□□ 1.99
RPUSD3-201ENST00000383820 ROBO1Q9Y6N7 1651 aa27.49■■□□□ 1.99
RPUSD3-201ENST00000383820 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.49■■□□□ 1.99
RPUSD3-201ENST00000383820 MSH6P52701 1360 aa27.48■■□□□ 1.99
RPUSD3-201ENST00000383820 TBX22Q9Y458 520 aa27.47■■□□□ 1.99
RPUSD3-201ENST00000383820 RBM33Q96EV2 1170 aaKnown RBP27.46■■□□□ 1.99
RPUSD3-201ENST00000383820 NCOA3Q9Y6Q9 1424 aa27.43■■□□□ 1.98
RPUSD3-201ENST00000383820 CHGAP10645 457 aaKnown RBP27.43■■□□□ 1.98
RPUSD3-201ENST00000383820 DIP2AQ14689 1571 aa27.42■■□□□ 1.98
RPUSD3-201ENST00000383820 NUP155O75694 1391 aa27.41■■□□□ 1.98
RPUSD3-201ENST00000383820 PIK3R4Q99570 1358 aa27.4■■□□□ 1.98
RPUSD3-201ENST00000383820 SLAIN2Q9P270 581 aa27.4■■□□□ 1.98
RPUSD3-201ENST00000383820 RGS17Q9UGC6 210 aaPredicted RBP27.4■■□□□ 1.98
RPUSD3-201ENST00000383820 ADAMTS13Q76LX8 1427 aa27.4■■□□□ 1.98
RPUSD3-201ENST00000383820 ITGAEP38570 1179 aa27.34■■□□□ 1.97
RPUSD3-201ENST00000383820 PHLPP1O60346 1717 aa27.33■■□□□ 1.97
RPUSD3-201ENST00000383820 NUTM2DQ5VT03 806 aaPredicted RBP27.32■■□□□ 1.96
RPUSD3-201ENST00000383820 TRPM2O94759 1503 aa27.31■■□□□ 1.96
RPUSD3-201ENST00000383820 C19orf44Q9H6X5 657 aa27.29■■□□□ 1.96
RPUSD3-201ENST00000383820 JCADQ9P266 1359 aa27.29■■□□□ 1.96
RPUSD3-201ENST00000383820 SPHKAPQ2M3C7 1700 aa27.29■■□□□ 1.96
RPUSD3-201ENST00000383820 C14orf37Q86TY3 774 aa27.28■■□□□ 1.96
RPUSD3-201ENST00000383820 CADPS2Q86UW7 1296 aa27.28■■□□□ 1.96
RPUSD3-201ENST00000383820 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.27■■□□□ 1.96
RPUSD3-201ENST00000383820 COL16A1Q07092 1604 aaPredicted RBP27.25■■□□□ 1.95
RPUSD3-201ENST00000383820 SETBP1Q9Y6X0 1596 aa27.24■■□□□ 1.95
RPUSD3-201ENST00000383820 AMOTL2Q9Y2J4 779 aa27.24■■□□□ 1.95
RPUSD3-201ENST00000383820 ATF3P18847 181 aa27.23■■□□□ 1.95
RPUSD3-201ENST00000383820 POTEAQ6S8J7 498 aa27.23■■□□□ 1.95
RPUSD3-201ENST00000383820 PPARGC1BQ86YN6 1023 aaKnown RBP27.23■■□□□ 1.95
RPUSD3-201ENST00000383820 PTPRUQ92729 1446 aa27.23■■□□□ 1.95
RPUSD3-201ENST00000383820 AHDC1Q5TGY3 1603 aaPredicted RBP27.21■■□□□ 1.95
RPUSD3-201ENST00000383820 NRXN3Q9Y4C0 1643 aa27.21■■□□□ 1.95
RPUSD3-201ENST00000383820 RRBP1Q9P2E9 1410 aaKnown RBP27.2■■□□□ 1.94
RPUSD3-201ENST00000383820 XRN1Q8IZH2 1706 aaKnown RBP27.19■■□□□ 1.94
RPUSD3-201ENST00000383820 DCCP43146 1447 aa27.19■■□□□ 1.94
RPUSD3-201ENST00000383820 SPATA31A6Q5VVP1 1343 aa27.17■■□□□ 1.94
RPUSD3-201ENST00000383820 ZNF326Q5BKZ1 582 aaKnown RBP27.17■■□□□ 1.94
RPUSD3-201ENST00000383820 CLTCL1P53675 1640 aa27.14■■□□□ 1.94
RPUSD3-201ENST00000383820 NAIPQ13075 1403 aa27.14■■□□□ 1.93
RPUSD3-201ENST00000383820 SHPRHQ149N8 1683 aa27.13■■□□□ 1.93
RPUSD3-201ENST00000383820 NEXMIFQ5QGS0 1516 aa27.12■■□□□ 1.93
RPUSD3-201ENST00000383820 BRINP3Q76B58 766 aa27.11■■□□□ 1.93
RPUSD3-201ENST00000383820 METP08581 1390 aa27.1■■□□□ 1.93
RPUSD3-201ENST00000383820 KIF1BO60333 1816 aa27.1■■□□□ 1.93
RPUSD3-201ENST00000383820 LRP6O75581 1613 aa27.09■■□□□ 1.93
RPUSD3-201ENST00000383820 MST1RQ04912 1400 aa27.07■■□□□ 1.92
RPUSD3-201ENST00000383820 ASXL1Q8IXJ9 1541 aa27.06■■□□□ 1.92
RPUSD3-201ENST00000383820 ADGRL3Q9HAR2 1447 aa27.05■■□□□ 1.92
RPUSD3-201ENST00000383820 MEX3CQ5U5Q3 659 aaKnown RBP27.04■■□□□ 1.92
RPUSD3-201ENST00000383820 HFM1A2PYH4 1435 aa27.04■■□□□ 1.92
RPUSD3-201ENST00000383820 ZNF772Q68DY9 489 aaPredicted RBP27.03■■□□□ 1.92
RPUSD3-201ENST00000383820 NHSL1Q5SYE7 1610 aa27.02■■□□□ 1.92
RPUSD3-201ENST00000383820 SETD5Q9C0A6 1442 aa27.02■■□□□ 1.92
RPUSD3-201ENST00000383820 VGFO15240 615 aaPredicted RBP27■■□□□ 1.91
RPUSD3-201ENST00000383820 TRIM52Q96A61 297 aa26.99■■□□□ 1.91
RPUSD3-201ENST00000383820 NALCNQ8IZF0 1738 aa26.99■■□□□ 1.91
RPUSD3-201ENST00000383820 RPGRIP1LQ68CZ1 1315 aa26.98■■□□□ 1.91
RPUSD3-201ENST00000383820 SETD1AO15047 1707 aaKnown RBP26.97■■□□□ 1.91
RPUSD3-201ENST00000383820 PTCH1Q13635 1447 aa26.97■■□□□ 1.91
RPUSD3-201ENST00000383820 LRRC59Q96AG4 307 aaKnown RBP26.96■■□□□ 1.91
RPUSD3-201ENST00000383820 PRAG1Q86YV5 1406 aa26.95■■□□□ 1.9
RPUSD3-201ENST00000383820 SLC4A1APQ9BWU0 796 aaKnown RBP26.94■■□□□ 1.9
RPUSD3-201ENST00000383820 NUTM2BA6NNL0 878 aaPredicted RBP26.91■■□□□ 1.9
RPUSD3-201ENST00000383820 NUTM2EB1AL46 878 aaPredicted RBP26.91■■□□□ 1.9
RPUSD3-201ENST00000383820 NUTM2AQ8IVF1 878 aaPredicted RBP26.91■■□□□ 1.9
RPUSD3-201ENST00000383820 PPLO60437 1756 aa26.9■■□□□ 1.9
RPUSD3-201ENST00000383820 C1orf167Q5SNV9 1468 aa26.9■■□□□ 1.9
RPUSD3-201ENST00000383820 ROBO2Q9HCK4 1378 aa26.88■■□□□ 1.89
RPUSD3-201ENST00000383820 LAMC1P11047 1609 aa26.88■■□□□ 1.89
RPUSD3-201ENST00000383820 PNPLA6Q8IY17 1366 aa26.87■■□□□ 1.89
RPUSD3-201ENST00000383820 RXRBP28702 533 aa26.87■■□□□ 1.89
RPUSD3-201ENST00000383820 CDK12Q9NYV4 1490 aaPredicted RBP26.87■■□□□ 1.89
RPUSD3-201ENST00000383820 AFF2P51816 1311 aa26.85■■□□□ 1.89
RPUSD3-201ENST00000383820 DDX17Q92841 729 aaKnown RBP26.84■■□□□ 1.89
RPUSD3-201ENST00000383820 SOS2Q07890 1332 aaPredicted RBP26.8■■□□□ 1.88
RPUSD3-201ENST00000383820 UPF1Q92900 1129 aaKnown RBP eCLIP26.79■■□□□ 1.88
RPUSD3-201ENST00000383820 CCDC144AA2RUR9 1427 aa26.79■■□□□ 1.88
RPUSD3-201ENST00000383820 ORAI2Q96SN7 254 aa26.78■■□□□ 1.88
RPUSD3-201ENST00000383820 C8orf37Q96NL8 207 aa26.77■■□□□ 1.88
RPUSD3-201ENST00000383820 FOXD1Q16676 465 aa26.76■■□□□ 1.87
RPUSD3-201ENST00000383820 CDC42BPGQ6DT37 1551 aa26.75■■□□□ 1.87
RPUSD3-201ENST00000383820 SPATA31E1Q6ZUB1 1445 aa26.75■■□□□ 1.87
RPUSD3-201ENST00000383820 ANKRD30BQ9BXX2 1392 aa26.75■■□□□ 1.87
RPUSD3-201ENST00000383820 ADGRF5Q8IZF2 1346 aa26.73■■□□□ 1.87
RPUSD3-201ENST00000383820 RBM6P78332 1123 aaKnown RBP26.73■■□□□ 1.87
RPUSD3-201ENST00000383820 IFT172Q9UG01 1749 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms