RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 CHD2O14647 1828 aaKnown RBP35.19■■■■□ 3.22
VLDLR-201ENST00000382096 RGS17Q9UGC6 210 aaPredicted RBP35.19■■■■□ 3.22
VLDLR-201ENST00000382096 ANKRD50Q9ULJ7 1429 aa35.19■■■■□ 3.22
VLDLR-201ENST00000382096 ZFYVE9O95405 1425 aa35.17■■■■□ 3.22
VLDLR-201ENST00000382096 PROSER2Q86WR7 435 aaPredicted RBP35.17■■■■□ 3.22
VLDLR-201ENST00000382096 TMEM131LA2VDJ0 1609 aa35.16■■■■□ 3.22
VLDLR-201ENST00000382096 UNC13BO14795 1591 aa35.13■■■■□ 3.21
VLDLR-201ENST00000382096 RBM33Q96EV2 1170 aaKnown RBP35.11■■■■□ 3.21
VLDLR-201ENST00000382096 PLEKHG1Q9ULL1 1385 aa35.11■■■■□ 3.21
VLDLR-201ENST00000382096 FAM50AQ14320 339 aaKnown RBP35.09■■■■□ 3.21
VLDLR-201ENST00000382096 PHLPP1O60346 1717 aa35.08■■■■□ 3.21
VLDLR-201ENST00000382096 MSH6P52701 1360 aa35.08■■■■□ 3.21
VLDLR-201ENST00000382096 E9PCH4 1651 aa35.07■■■■□ 3.2
VLDLR-201ENST00000382096 RIMS2Q9UQ26 1411 aa35.06■■■■□ 3.2
VLDLR-201ENST00000382096 BCANQ96GW7 911 aa35.05■■■■□ 3.2
VLDLR-201ENST00000382096 IQGAP3Q86VI3 1631 aa35■■■■□ 3.19
VLDLR-201ENST00000382096 HDGFP51858 240 aaKnown RBP34.99■■■■□ 3.19
VLDLR-201ENST00000382096 PPP1R15AO75807 674 aaPredicted RBP34.98■■■■□ 3.19
VLDLR-201ENST00000382096 SLAIN2Q9P270 581 aa34.98■■■■□ 3.19
VLDLR-201ENST00000382096 DIP2AQ14689 1571 aa34.98■■■■□ 3.19
VLDLR-201ENST00000382096 POTEAQ6S8J7 498 aa34.96■■■■□ 3.19
VLDLR-201ENST00000382096 NCOA3Q9Y6Q9 1424 aa34.96■■■■□ 3.19
VLDLR-201ENST00000382096 COL16A1Q07092 1604 aaPredicted RBP34.95■■■■□ 3.19
VLDLR-201ENST00000382096 TBX22Q9Y458 520 aa34.95■■■■□ 3.19
VLDLR-201ENST00000382096 ADAMTS13Q76LX8 1427 aa34.92■■■■□ 3.18
VLDLR-201ENST00000382096 ROCK1Q13464 1354 aa34.92■■■■□ 3.18
VLDLR-201ENST00000382096 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.92■■■■□ 3.18
VLDLR-201ENST00000382096 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.91■■■■□ 3.18
VLDLR-201ENST00000382096 JCADQ9P266 1359 aa34.9■■■■□ 3.18
VLDLR-201ENST00000382096 PIK3R4Q99570 1358 aa34.87■■■■□ 3.17
VLDLR-201ENST00000382096 CHGAP10645 457 aaKnown RBP34.85■■■■□ 3.17
VLDLR-201ENST00000382096 TRPM2O94759 1503 aa34.84■■■■□ 3.17
VLDLR-201ENST00000382096 AHDC1Q5TGY3 1603 aaPredicted RBP34.84■■■■□ 3.17
VLDLR-201ENST00000382096 SETD1AO15047 1707 aaKnown RBP34.83■■■■□ 3.17
VLDLR-201ENST00000382096 SHPRHQ149N8 1683 aa34.8■■■■□ 3.16
VLDLR-201ENST00000382096 NUTM2DQ5VT03 806 aaPredicted RBP34.79■■■■□ 3.16
VLDLR-201ENST00000382096 SPHKAPQ2M3C7 1700 aa34.78■■■■□ 3.16
VLDLR-201ENST00000382096 C14orf37Q86TY3 774 aa34.77■■■■□ 3.16
VLDLR-201ENST00000382096 NRXN3Q9Y4C0 1643 aa34.77■■■■□ 3.16
VLDLR-201ENST00000382096 CADPS2Q86UW7 1296 aa34.76■■■■□ 3.16
VLDLR-201ENST00000382096 C19orf44Q9H6X5 657 aa34.76■■■■□ 3.16
VLDLR-201ENST00000382096 LRP6O75581 1613 aa34.76■■■■□ 3.15
VLDLR-201ENST00000382096 NUP155O75694 1391 aa34.75■■■■□ 3.15
VLDLR-201ENST00000382096 XRN1Q8IZH2 1706 aaKnown RBP34.75■■■■□ 3.15
VLDLR-201ENST00000382096 SPATA31A6Q5VVP1 1343 aa34.74■■■■□ 3.15
VLDLR-201ENST00000382096 PTPRUQ92729 1446 aa34.73■■■■□ 3.15
VLDLR-201ENST00000382096 SETBP1Q9Y6X0 1596 aa34.72■■■■□ 3.15
VLDLR-201ENST00000382096 ATF3P18847 181 aa34.71■■■■□ 3.15
VLDLR-201ENST00000382096 DCCP43146 1447 aa34.69■■■■□ 3.14
VLDLR-201ENST00000382096 AMOTL2Q9Y2J4 779 aa34.68■■■■□ 3.14
VLDLR-201ENST00000382096 NHSL1Q5SYE7 1610 aa34.62■■■■□ 3.13
VLDLR-201ENST00000382096 BRINP3Q76B58 766 aa34.61■■■■□ 3.13
VLDLR-201ENST00000382096 ASXL1Q8IXJ9 1541 aa34.6■■■■□ 3.13
VLDLR-201ENST00000382096 PPARGC1BQ86YN6 1023 aaKnown RBP34.6■■■■□ 3.13
VLDLR-201ENST00000382096 ITGAEP38570 1179 aa34.59■■■■□ 3.13
VLDLR-201ENST00000382096 MEX3CQ5U5Q3 659 aaKnown RBP34.58■■■■□ 3.13
VLDLR-201ENST00000382096 ZNF772Q68DY9 489 aaPredicted RBP34.57■■■■□ 3.12
VLDLR-201ENST00000382096 CLTCL1P53675 1640 aa34.56■■■■□ 3.12
VLDLR-201ENST00000382096 MST1RQ04912 1400 aa34.55■■■■□ 3.12
VLDLR-201ENST00000382096 NEXMIFQ5QGS0 1516 aa34.55■■■■□ 3.12
VLDLR-201ENST00000382096 NALCNQ8IZF0 1738 aa34.54■■■■□ 3.12
VLDLR-201ENST00000382096 KIF1BO60333 1816 aa34.53■■■■□ 3.12
VLDLR-201ENST00000382096 METP08581 1390 aa34.53■■■■□ 3.12
VLDLR-201ENST00000382096 SETD5Q9C0A6 1442 aa34.52■■■■□ 3.12
VLDLR-201ENST00000382096 RRBP1Q9P2E9 1410 aaKnown RBP34.51■■■■□ 3.12
VLDLR-201ENST00000382096 ZNF326Q5BKZ1 582 aaKnown RBP34.5■■■■□ 3.11
VLDLR-201ENST00000382096 ADGRL3Q9HAR2 1447 aa34.48■■■■□ 3.11
VLDLR-201ENST00000382096 CDK12Q9NYV4 1490 aaPredicted RBP34.44■■■■□ 3.1
VLDLR-201ENST00000382096 TRIM52Q96A61 297 aa34.42■■■■□ 3.1
VLDLR-201ENST00000382096 NUTM2BA6NNL0 878 aaPredicted RBP34.41■■■■□ 3.1
VLDLR-201ENST00000382096 NUTM2EB1AL46 878 aaPredicted RBP34.41■■■■□ 3.1
VLDLR-201ENST00000382096 NUTM2AQ8IVF1 878 aaPredicted RBP34.41■■■■□ 3.1
VLDLR-201ENST00000382096 UPF1Q92900 1129 aaKnown RBP eCLIP34.4■■■■□ 3.1
VLDLR-201ENST00000382096 LAMC1P11047 1609 aa34.4■■■■□ 3.1
VLDLR-201ENST00000382096 RXRBP28702 533 aa34.39■■■■□ 3.1
VLDLR-201ENST00000382096 LRRC59Q96AG4 307 aaKnown RBP34.38■■■■□ 3.09
VLDLR-201ENST00000382096 AFF2P51816 1311 aa34.36■■■■□ 3.09
VLDLR-201ENST00000382096 NAIPQ13075 1403 aa34.36■■■■□ 3.09
VLDLR-201ENST00000382096 PTCH1Q13635 1447 aa34.35■■■■□ 3.09
VLDLR-201ENST00000382096 PNPLA6Q8IY17 1366 aa34.35■■■■□ 3.09
VLDLR-201ENST00000382096 C1orf167Q5SNV9 1468 aa34.32■■■■□ 3.08
VLDLR-201ENST00000382096 PRAG1Q86YV5 1406 aa34.31■■■■□ 3.08
VLDLR-201ENST00000382096 DDX17Q92841 729 aaKnown RBP34.3■■■■□ 3.08
VLDLR-201ENST00000382096 PPLO60437 1756 aa34.3■■■■□ 3.08
VLDLR-201ENST00000382096 ROBO2Q9HCK4 1378 aa34.24■■■■□ 3.07
VLDLR-201ENST00000382096 VGFO15240 615 aaPredicted RBP34.24■■■■□ 3.07
VLDLR-201ENST00000382096 C8orf37Q96NL8 207 aa34.23■■■■□ 3.07
VLDLR-201ENST00000382096 RGS12O14924 1447 aa34.22■■■■□ 3.07
VLDLR-201ENST00000382096 HFM1A2PYH4 1435 aa34.21■■■■□ 3.07
VLDLR-201ENST00000382096 RPGRIP1LQ68CZ1 1315 aa34.19■■■■□ 3.06
VLDLR-201ENST00000382096 RBM6P78332 1123 aaKnown RBP34.18■■■■□ 3.06
VLDLR-201ENST00000382096 SOS2Q07890 1332 aaPredicted RBP34.18■■■■□ 3.06
VLDLR-201ENST00000382096 COL22A1Q8NFW1 1626 aaPredicted RBP34.18■■■■□ 3.06
VLDLR-201ENST00000382096 QTRT2Q9H974 415 aaKnown RBP34.17■■■■□ 3.06
VLDLR-201ENST00000382096 ORAI2Q96SN7 254 aa34.14■■■■□ 3.06
VLDLR-201ENST00000382096 CDC42BPGQ6DT37 1551 aa34.14■■■■□ 3.06
VLDLR-201ENST00000382096 ADAMTS2O95450 1211 aa34.1■■■■□ 3.05
VLDLR-201ENST00000382096 NGLY1Q96IV0 654 aa34.1■■■■□ 3.05
VLDLR-201ENST00000382096 SLC4A1APQ9BWU0 796 aaKnown RBP34.09■■■■□ 3.05
VLDLR-201ENST00000382096 MARF1Q9Y4F3 1742 aaKnown RBP34.09■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms