RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 THEMISQ8N1K5 641 aaPredicted RBP17.59■□□□□ 0.41
APOBEC3F-202ENST00000381565 HFM1A2PYH4 1435 aa17.58■□□□□ 0.41
APOBEC3F-202ENST00000381565 SPHKAPQ2M3C7 1700 aa17.58■□□□□ 0.4
APOBEC3F-202ENST00000381565 LRRC7Q96NW7 1537 aa17.57■□□□□ 0.4
APOBEC3F-202ENST00000381565 HOXD11P31277 338 aaPredicted RBP17.55■□□□□ 0.4
APOBEC3F-202ENST00000381565 ADGRB3O60242 1522 aa17.55■□□□□ 0.4
APOBEC3F-202ENST00000381565 SLIT1O75093 1534 aa17.53■□□□□ 0.4
APOBEC3F-202ENST00000381565 ARHGAP23Q9P227 1491 aa17.52■□□□□ 0.4
APOBEC3F-202ENST00000381565 NUP155O75694 1391 aa17.52■□□□□ 0.39
APOBEC3F-202ENST00000381565 TMEM131LA2VDJ0 1609 aa17.51■□□□□ 0.39
APOBEC3F-202ENST00000381565 SCAF11Q99590 1463 aaKnown RBP17.48■□□□□ 0.39
APOBEC3F-202ENST00000381565 LTKP29376 864 aa17.46■□□□□ 0.39
APOBEC3F-202ENST00000381565 CLTCL1P53675 1640 aa17.46■□□□□ 0.39
APOBEC3F-202ENST00000381565 XIRP1Q702N8 1843 aaKnown RBP17.45■□□□□ 0.38
APOBEC3F-202ENST00000381565 IDI1Q13907 227 aa17.45■□□□□ 0.38
APOBEC3F-202ENST00000381565 TRPM2O94759 1503 aa17.44■□□□□ 0.38
APOBEC3F-202ENST00000381565 KIF1BO60333 1816 aa17.42■□□□□ 0.38
APOBEC3F-202ENST00000381565 TMEM2Q9UHN6 1383 aa17.41■□□□□ 0.38
APOBEC3F-202ENST00000381565 ZFYVE9O95405 1425 aa17.4■□□□□ 0.38
APOBEC3F-202ENST00000381565 SLC52A1Q9NWF4 448 aa17.4■□□□□ 0.38
APOBEC3F-202ENST00000381565 TXNDC2Q86VQ3 553 aa17.38■□□□□ 0.37
APOBEC3F-202ENST00000381565 RGS17Q9UGC6 210 aaPredicted RBP17.38■□□□□ 0.37
APOBEC3F-202ENST00000381565 SETD5Q9C0A6 1442 aa17.35■□□□□ 0.37
APOBEC3F-202ENST00000381565 STAG3Q9UJ98 1225 aa17.34■□□□□ 0.37
APOBEC3F-202ENST00000381565 NRXN3Q9Y4C0 1643 aa17.33■□□□□ 0.37
APOBEC3F-202ENST00000381565 RIMS2Q9UQ26 1411 aa17.33■□□□□ 0.36
APOBEC3F-202ENST00000381565 FAM135BQ49AJ0 1406 aa17.32■□□□□ 0.36
APOBEC3F-202ENST00000381565 TMEM94Q12767 1356 aa17.32■□□□□ 0.36
APOBEC3F-202ENST00000381565 TRIM52Q96A61 297 aa17.32■□□□□ 0.36
APOBEC3F-202ENST00000381565 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
APOBEC3F-202ENST00000381565 CHD2O14647 1828 aaKnown RBP17.32■□□□□ 0.36
APOBEC3F-202ENST00000381565 NWD1Q149M9 1564 aa17.32■□□□□ 0.36
APOBEC3F-202ENST00000381565 NEXMIFQ5QGS0 1516 aa17.31■□□□□ 0.36
APOBEC3F-202ENST00000381565 RAB3GAP2Q9H2M9 1393 aa17.31■□□□□ 0.36
APOBEC3F-202ENST00000381565 PPLO60437 1756 aa17.31■□□□□ 0.36
APOBEC3F-202ENST00000381565 EID1Q9Y6B2 187 aa17.31■□□□□ 0.36
APOBEC3F-202ENST00000381565 IFT172Q9UG01 1749 aa17.3■□□□□ 0.36
APOBEC3F-202ENST00000381565 ROBO1Q9Y6N7 1651 aa17.29■□□□□ 0.36
APOBEC3F-202ENST00000381565 DIP2AQ14689 1571 aa17.28■□□□□ 0.36
APOBEC3F-202ENST00000381565 PLEKHG1Q9ULL1 1385 aa17.28■□□□□ 0.36
APOBEC3F-202ENST00000381565 SETD1AO15047 1707 aaKnown RBP17.27■□□□□ 0.36
APOBEC3F-202ENST00000381565 KCNA6P17658 529 aa17.27■□□□□ 0.36
APOBEC3F-202ENST00000381565 CHGAP10645 457 aaKnown RBP17.26■□□□□ 0.35
APOBEC3F-202ENST00000381565 RBM33Q96EV2 1170 aaKnown RBP17.26■□□□□ 0.35
APOBEC3F-202ENST00000381565 SLC26A8Q96RN1 970 aa17.26■□□□□ 0.35
APOBEC3F-202ENST00000381565 SETBP1Q9Y6X0 1596 aa17.26■□□□□ 0.35
APOBEC3F-202ENST00000381565 NKTRP30414 1462 aaKnown RBP17.25■□□□□ 0.35
APOBEC3F-202ENST00000381565 ADAMTS13Q76LX8 1427 aa17.24■□□□□ 0.35
APOBEC3F-202ENST00000381565 POTEAQ6S8J7 498 aa17.24■□□□□ 0.35
APOBEC3F-202ENST00000381565 MPHOSPH9Q99550 1183 aa17.24■□□□□ 0.35
APOBEC3F-202ENST00000381565 XRN1Q8IZH2 1706 aaKnown RBP17.21■□□□□ 0.35
APOBEC3F-202ENST00000381565 NUTM2DQ5VT03 806 aaPredicted RBP17.21■□□□□ 0.35
APOBEC3F-202ENST00000381565 PROSER2Q86WR7 435 aaPredicted RBP17.21■□□□□ 0.35
APOBEC3F-202ENST00000381565 PPP1R15AO75807 674 aaPredicted RBP17.19■□□□□ 0.34
APOBEC3F-202ENST00000381565 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.19■□□□□ 0.34
APOBEC3F-202ENST00000381565 CCDC144AA2RUR9 1427 aa17.19■□□□□ 0.34
APOBEC3F-202ENST00000381565 SPATA31E1Q6ZUB1 1445 aa17.19■□□□□ 0.34
APOBEC3F-202ENST00000381565 ACIN1Q9UKV3 1341 aaKnown RBP17.19■□□□□ 0.34
APOBEC3F-202ENST00000381565 PHLPP1O60346 1717 aa17.16■□□□□ 0.34
APOBEC3F-202ENST00000381565 MSH6P52701 1360 aa17.15■□□□□ 0.34
APOBEC3F-202ENST00000381565 COL16A1Q07092 1604 aaPredicted RBP17.15■□□□□ 0.34
APOBEC3F-202ENST00000381565 HDGFP51858 240 aaKnown RBP17.15■□□□□ 0.34
APOBEC3F-202ENST00000381565 ZNF326Q5BKZ1 582 aaKnown RBP17.15■□□□□ 0.34
APOBEC3F-202ENST00000381565 SLAIN2Q9P270 581 aa17.14■□□□□ 0.33
APOBEC3F-202ENST00000381565 PTPRUQ92729 1446 aa17.13■□□□□ 0.33
APOBEC3F-202ENST00000381565 HRCP23327 699 aa17.13■□□□□ 0.33
APOBEC3F-202ENST00000381565 LRP6O75581 1613 aa17.12■□□□□ 0.33
APOBEC3F-202ENST00000381565 BCANQ96GW7 911 aa17.12■□□□□ 0.33
APOBEC3F-202ENST00000381565 TBX22Q9Y458 520 aa17.12■□□□□ 0.33
APOBEC3F-202ENST00000381565 PIK3R4Q99570 1358 aa17.12■□□□□ 0.33
APOBEC3F-202ENST00000381565 JCADQ9P266 1359 aa17.12■□□□□ 0.33
APOBEC3F-202ENST00000381565 ANKRD30BQ9BXX2 1392 aa17.11■□□□□ 0.33
APOBEC3F-202ENST00000381565 NALCNQ8IZF0 1738 aa17.1■□□□□ 0.33
APOBEC3F-202ENST00000381565 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.1■□□□□ 0.33
APOBEC3F-202ENST00000381565 POTEDQ86YR6 584 aa17.09■□□□□ 0.33
APOBEC3F-202ENST00000381565 ASXL1Q8IXJ9 1541 aa17.08■□□□□ 0.32
APOBEC3F-202ENST00000381565 NCOA3Q9Y6Q9 1424 aa17.08■□□□□ 0.32
APOBEC3F-202ENST00000381565 METP08581 1390 aa17.08■□□□□ 0.32
APOBEC3F-202ENST00000381565 RPGRIP1LQ68CZ1 1315 aa17.08■□□□□ 0.32
APOBEC3F-202ENST00000381565 AHDC1Q5TGY3 1603 aaPredicted RBP17.07■□□□□ 0.32
APOBEC3F-202ENST00000381565 KNDC1Q76NI1 1749 aa17.07■□□□□ 0.32
APOBEC3F-202ENST00000381565 LAMC1P11047 1609 aa17.07■□□□□ 0.32
APOBEC3F-202ENST00000381565 MYOM2P54296 1465 aa17.06■□□□□ 0.32
APOBEC3F-202ENST00000381565 NRXN1Q9ULB1 1477 aa17.05■□□□□ 0.32
APOBEC3F-202ENST00000381565 PIK3C2GO75747 1445 aa17.04■□□□□ 0.32
APOBEC3F-202ENST00000381565 PRAG1Q86YV5 1406 aa17.04■□□□□ 0.32
APOBEC3F-202ENST00000381565 SHPRHQ149N8 1683 aa17.04■□□□□ 0.32
APOBEC3F-202ENST00000381565 ADGRF5Q8IZF2 1346 aa17.03■□□□□ 0.32
APOBEC3F-202ENST00000381565 VGFO15240 615 aaPredicted RBP17.03■□□□□ 0.32
APOBEC3F-202ENST00000381565 RGL3Q3MIN7 710 aa17.02■□□□□ 0.32
APOBEC3F-202ENST00000381565 SPATA31A6Q5VVP1 1343 aa17.01■□□□□ 0.31
APOBEC3F-202ENST00000381565 AMOTL2Q9Y2J4 779 aa17.01■□□□□ 0.31
APOBEC3F-202ENST00000381565 PTCH1Q13635 1447 aa17.01■□□□□ 0.31
APOBEC3F-202ENST00000381565 CADPS2Q86UW7 1296 aa16.99■□□□□ 0.31
APOBEC3F-202ENST00000381565 C19orf44Q9H6X5 657 aa16.99■□□□□ 0.31
APOBEC3F-202ENST00000381565 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
APOBEC3F-202ENST00000381565 BRINP3Q76B58 766 aa16.97■□□□□ 0.31
APOBEC3F-202ENST00000381565 DCCP43146 1447 aa16.96■□□□□ 0.3
APOBEC3F-202ENST00000381565 ADGRL3Q9HAR2 1447 aa16.96■□□□□ 0.3
APOBEC3F-202ENST00000381565 ROBO2Q9HCK4 1378 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms