RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 CCDC7Q96M83 1385 aa15.29■□□□□ 0.04
FAM239A-201ENST00000381108 ST20-MTHFSA0A0A6YYL1 179 aa15.28■□□□□ 0.04
FAM239A-201ENST00000381108 AMER1Q5JTC6 1135 aaPredicted RBP15.28■□□□□ 0.04
FAM239A-201ENST00000381108 POLR3GLQ9BT43 218 aa15.28■□□□□ 0.04
FAM239A-201ENST00000381108 ESF1Q9H501 851 aaKnown RBP15.28■□□□□ 0.04
FAM239A-201ENST00000381108 KIF7Q2M1P5 1343 aa15.28■□□□□ 0.04
FAM239A-201ENST00000381108 ADGRF5Q8IZF2 1346 aa15.27■□□□□ 0.04
FAM239A-201ENST00000381108 GPRASP1Q5JY77 1395 aa15.27■□□□□ 0.03
FAM239A-201ENST00000381108 ERVK-7P63135 1459 aa15.27■□□□□ 0.03
FAM239A-201ENST00000381108 IDI1Q13907 227 aa15.26■□□□□ 0.03
FAM239A-201ENST00000381108 MYOM2P54296 1465 aa15.26■□□□□ 0.03
FAM239A-201ENST00000381108 LAMC1P11047 1609 aa15.26■□□□□ 0.03
FAM239A-201ENST00000381108 PPLO60437 1756 aa15.26■□□□□ 0.03
FAM239A-201ENST00000381108 MYO5BQ9ULV0 1848 aa15.26■□□□□ 0.03
FAM239A-201ENST00000381108 NUTM2DQ5VT03 806 aaPredicted RBP15.25■□□□□ 0.03
FAM239A-201ENST00000381108 STAC3Q96MF2 364 aa15.25■□□□□ 0.03
FAM239A-201ENST00000381108 SLC52A1Q9NWF4 448 aa15.24■□□□□ 0.03
FAM239A-201ENST00000381108 YTHDC1Q96MU7 727 aaKnown RBP15.23■□□□□ 0.03
FAM239A-201ENST00000381108 CFAP70Q5T0N1 1121 aa15.22■□□□□ 0.03
FAM239A-201ENST00000381108 SCAF1Q9H7N4 1312 aaKnown RBP15.22■□□□□ 0.03
FAM239A-201ENST00000381108 TMEM131LA2VDJ0 1609 aa15.21■□□□□ 0.03
FAM239A-201ENST00000381108 SPATA31D1Q6ZQQ2 1576 aa15.21■□□□□ 0.03
FAM239A-201ENST00000381108 ZMYM3Q14202 1370 aa15.21■□□□□ 0.03
FAM239A-201ENST00000381108 KIAA1210Q9ULL0 1709 aa15.21■□□□□ 0.03
FAM239A-201ENST00000381108 NEXMIFQ5QGS0 1516 aa15.21■□□□□ 0.03
FAM239A-201ENST00000381108 IQGAP1P46940 1657 aa15.21■□□□□ 0.02
FAM239A-201ENST00000381108 NRXN1Q9ULB1 1477 aa15.2■□□□□ 0.02
FAM239A-201ENST00000381108 ANP32CO43423 234 aa15.2■□□□□ 0.02
FAM239A-201ENST00000381108 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
FAM239A-201ENST00000381108 STAG3Q9UJ98 1225 aa15.19■□□□□ 0.02
FAM239A-201ENST00000381108 RPGRIP1LQ68CZ1 1315 aa15.19■□□□□ 0.02
FAM239A-201ENST00000381108 PIK3C2GO75747 1445 aa15.18■□□□□ 0.02
FAM239A-201ENST00000381108 SCAF11Q99590 1463 aaKnown RBP15.17■□□□□ 0.02
FAM239A-201ENST00000381108 FER1L4A9Z1Z3 1794 aa15.15■□□□□ 0.02
FAM239A-201ENST00000381108 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
FAM239A-201ENST00000381108 TESK2Q96S53 571 aa15.15■□□□□ 0.02
FAM239A-201ENST00000381108 DISP3Q9P2K9 1392 aa15.14■□□□□ 0.01
FAM239A-201ENST00000381108 ZBTB22O15209 634 aa15.14■□□□□ 0.01
FAM239A-201ENST00000381108 CEBPAP49715 358 aaPredicted RBP15.13■□□□□ 0.01
FAM239A-201ENST00000381108 TMEM132EQ6IEE7 984 aa15.13■□□□□ 0.01
FAM239A-201ENST00000381108 EIF3AQ14152 1382 aaKnown RBP15.13■□□□□ 0.01
FAM239A-201ENST00000381108 PELP1Q8IZL8 1130 aaKnown RBP15.12■□□□□ 0.01
FAM239A-201ENST00000381108 TNRQ92752 1358 aa15.12■□□□□ 0.01
FAM239A-201ENST00000381108 A2ML1A8K2U0 1454 aa15.12■□□□□ 0.01
FAM239A-201ENST00000381108 SETBP1Q9Y6X0 1596 aa15.12■□□□□ 0.01
FAM239A-201ENST00000381108 CNGB1Q14028 1251 aaPredicted RBP15.12■□□□□ 0.01
FAM239A-201ENST00000381108 C14orf93Q9H972 538 aaKnown RBP15.12■□□□□ 0.01
FAM239A-201ENST00000381108 C3P01024 1663 aa15.11■□□□□ 0.01
FAM239A-201ENST00000381108 TMF1P82094 1093 aa15.11■□□□□ 0.01
FAM239A-201ENST00000381108 ADGRB1O14514 1584 aa15.1■□□□□ 0.01
FAM239A-201ENST00000381108 TRAK1Q9UPV9 953 aa15.1■□□□□ 0.01
FAM239A-201ENST00000381108 ZFYVE9O95405 1425 aa15.08■□□□□ 0.01
FAM239A-201ENST00000381108 RIMS2Q9UQ26 1411 aa15.07■□□□□ 0
FAM239A-201ENST00000381108 UBR1Q8IWV7 1749 aa15.06■□□□□ 0
FAM239A-201ENST00000381108 MYO3AQ8NEV4 1616 aa15.05■□□□□ 0
FAM239A-201ENST00000381108 ASXL1Q8IXJ9 1541 aa15.05■□□□□ 0
FAM239A-201ENST00000381108 NPM3O75607 178 aaKnown RBP15.05■□□□□ -0
FAM239A-201ENST00000381108 PRKRIP1Q9H875 184 aaPredicted RBP15.05■□□□□ -0
FAM239A-201ENST00000381108 CCER2I3L3R5 266 aa15.04■□□□□ -0
FAM239A-201ENST00000381108 STK26Q9P289 416 aa15.04■□□□□ -0
FAM239A-201ENST00000381108 RIMS1Q86UR5 1692 aaKnown RBP15.04■□□□□ -0
FAM239A-201ENST00000381108 QRICH2Q9H0J4 1663 aa15.04■□□□□ -0
FAM239A-201ENST00000381108 CENPJQ9HC77 1338 aaPredicted RBP15.04■□□□□ -0
FAM239A-201ENST00000381108 ARHGEF28Q8N1W1 1705 aaKnown RBP15.03■□□□□ -0
FAM239A-201ENST00000381108 ALKQ9UM73 1620 aa15.03■□□□□ -0
FAM239A-201ENST00000381108 KDM5AP29375 1690 aaKnown RBP15.02□□□□□ -0.01
FAM239A-201ENST00000381108 GTF3C3Q9Y5Q9 886 aa15.02□□□□□ -0.01
FAM239A-201ENST00000381108 NLRP1Q9C000 1473 aa15.01□□□□□ -0.01
FAM239A-201ENST00000381108 SAFB2Q14151 953 aaKnown RBP eCLIP15.01□□□□□ -0.01
FAM239A-201ENST00000381108 CDCA8Q53HL2 280 aa15□□□□□ -0.01
FAM239A-201ENST00000381108 TMEM2Q9UHN6 1383 aa14.99□□□□□ -0.01
FAM239A-201ENST00000381108 BCANQ96GW7 911 aa14.99□□□□□ -0.01
FAM239A-201ENST00000381108 PANK3Q9H999 370 aa14.99□□□□□ -0.01
FAM239A-201ENST00000381108 MYOM1P52179 1685 aa14.99□□□□□ -0.01
FAM239A-201ENST00000381108 NRXN3Q9Y4C0 1643 aa14.99□□□□□ -0.01
FAM239A-201ENST00000381108 PTPRMP28827 1452 aa14.98□□□□□ -0.01
FAM239A-201ENST00000381108 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.98□□□□□ -0.01
FAM239A-201ENST00000381108 YTHDC2Q9H6S0 1430 aaKnown RBP14.98□□□□□ -0.01
FAM239A-201ENST00000381108 SETD1AO15047 1707 aaKnown RBP14.98□□□□□ -0.01
FAM239A-201ENST00000381108 CCDC184Q52MB2 194 aa14.98□□□□□ -0.01
FAM239A-201ENST00000381108 SBNO2Q9Y2G9 1366 aa14.98□□□□□ -0.01
FAM239A-201ENST00000381108 ADAMTSL3P82987 1691 aa14.96□□□□□ -0.01
FAM239A-201ENST00000381108 HDGFP51858 240 aaKnown RBP14.95□□□□□ -0.02
FAM239A-201ENST00000381108 PRAM1Q96QH2 718 aa14.95□□□□□ -0.02
FAM239A-201ENST00000381108 MRS2Q9HD23 443 aa14.95□□□□□ -0.02
FAM239A-201ENST00000381108 PER1O15534 1290 aaPredicted RBP14.94□□□□□ -0.02
FAM239A-201ENST00000381108 LTKP29376 864 aa14.94□□□□□ -0.02
FAM239A-201ENST00000381108 POGKQ9P215 609 aa14.94□□□□□ -0.02
FAM239A-201ENST00000381108 CC2D1BQ5T0F9 858 aaKnown RBP14.93□□□□□ -0.02
FAM239A-201ENST00000381108 METP08581 1390 aa14.93□□□□□ -0.02
FAM239A-201ENST00000381108 TXNDC2Q86VQ3 553 aa14.92□□□□□ -0.02
FAM239A-201ENST00000381108 TULP4Q9NRJ4 1543 aa14.92□□□□□ -0.02
FAM239A-201ENST00000381108 KTN1Q86UP2 1357 aaKnown RBP14.92□□□□□ -0.02
FAM239A-201ENST00000381108 CEP170BQ9Y4F5 1589 aaPredicted RBP14.92□□□□□ -0.02
FAM239A-201ENST00000381108 MINK1Q8N4C8 1332 aaPredicted RBP14.91□□□□□ -0.02
FAM239A-201ENST00000381108 TMC1Q8TDI8 760 aa14.91□□□□□ -0.02
FAM239A-201ENST00000381108 EID1Q9Y6B2 187 aa14.91□□□□□ -0.02
FAM239A-201ENST00000381108 EVC2Q86UK5 1308 aa14.9□□□□□ -0.02
FAM239A-201ENST00000381108 SLIT1O75093 1534 aa14.9□□□□□ -0.02
FAM239A-201ENST00000381108 WAPLQ7Z5K2 1190 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms