RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 KIF1BO60333 1816 aa29.35■■■□□ 2.29
CDPF1-202ENST00000381037 NPHP4O75161 1426 aaPredicted RBP29.35■■■□□ 2.29
CDPF1-202ENST00000381037 SPATA31E1Q6ZUB1 1445 aa29.34■■■□□ 2.29
CDPF1-202ENST00000381037 DHX57Q6P158 1386 aaKnown RBP29.33■■■□□ 2.29
CDPF1-202ENST00000381037 HDGFP51858 240 aaKnown RBP29.31■■■□□ 2.28
CDPF1-202ENST00000381037 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.31■■■□□ 2.28
CDPF1-202ENST00000381037 ZNF326Q5BKZ1 582 aaKnown RBP29.29■■■□□ 2.28
CDPF1-202ENST00000381037 NEXMIFQ5QGS0 1516 aa29.28■■■□□ 2.28
CDPF1-202ENST00000381037 IQGAP1P46940 1657 aa29.28■■■□□ 2.28
CDPF1-202ENST00000381037 PLEKHG1Q9ULL1 1385 aa29.26■■■□□ 2.27
CDPF1-202ENST00000381037 NUTM2DQ5VT03 806 aaPredicted RBP29.26■■■□□ 2.27
CDPF1-202ENST00000381037 RPGRIP1LQ68CZ1 1315 aa29.26■■■□□ 2.27
CDPF1-202ENST00000381037 PPP1R15AO75807 674 aaPredicted RBP29.22■■■□□ 2.27
CDPF1-202ENST00000381037 RGL3Q3MIN7 710 aa29.22■■■□□ 2.27
CDPF1-202ENST00000381037 SLC26A8Q96RN1 970 aa29.17■■■□□ 2.26
CDPF1-202ENST00000381037 ZNF335Q9H4Z2 1342 aaPredicted RBP29.17■■■□□ 2.26
CDPF1-202ENST00000381037 VGFO15240 615 aaPredicted RBP29.16■■■□□ 2.26
CDPF1-202ENST00000381037 ADAMTS13Q76LX8 1427 aa29.16■■■□□ 2.26
CDPF1-202ENST00000381037 PPLO60437 1756 aa29.16■■■□□ 2.26
CDPF1-202ENST00000381037 LTBP4Q8N2S1 1624 aa29.14■■■□□ 2.26
CDPF1-202ENST00000381037 IFT172Q9UG01 1749 aa29.14■■■□□ 2.25
CDPF1-202ENST00000381037 SETBP1Q9Y6X0 1596 aa29.14■■■□□ 2.25
CDPF1-202ENST00000381037 SENP3Q9H4L4 574 aaPredicted RBP29.13■■■□□ 2.25
CDPF1-202ENST00000381037 TBX22Q9Y458 520 aa29.13■■■□□ 2.25
CDPF1-202ENST00000381037 NRXN3Q9Y4C0 1643 aa29.13■■■□□ 2.25
CDPF1-202ENST00000381037 BCANQ96GW7 911 aa29.11■■■□□ 2.25
CDPF1-202ENST00000381037 SIN3AQ96ST3 1273 aa29.11■■■□□ 2.25
CDPF1-202ENST00000381037 ADGRF5Q8IZF2 1346 aa29.1■■■□□ 2.25
CDPF1-202ENST00000381037 DIP2AQ14689 1571 aa29.07■■■□□ 2.24
CDPF1-202ENST00000381037 MYOM2P54296 1465 aa29.05■■■□□ 2.24
CDPF1-202ENST00000381037 NRXN1Q9ULB1 1477 aa29.05■■■□□ 2.24
CDPF1-202ENST00000381037 STRCP1A6NGW2 1772 aa29.04■■■□□ 2.24
CDPF1-202ENST00000381037 PIK3R4Q99570 1358 aa29.02■■■□□ 2.24
CDPF1-202ENST00000381037 PIK3C2GO75747 1445 aa29.02■■■□□ 2.24
CDPF1-202ENST00000381037 KCNA6P17658 529 aa29.02■■■□□ 2.24
CDPF1-202ENST00000381037 DCAF11Q8TEB1 546 aa29.01■■■□□ 2.23
CDPF1-202ENST00000381037 STAC3Q96MF2 364 aa29.01■■■□□ 2.23
CDPF1-202ENST00000381037 CPS1P31327 1500 aa29■■■□□ 2.23
CDPF1-202ENST00000381037 METP08581 1390 aa28.99■■■□□ 2.23
CDPF1-202ENST00000381037 ALKQ9UM73 1620 aa28.99■■■□□ 2.23
CDPF1-202ENST00000381037 NEUROD1Q13562 356 aa28.98■■■□□ 2.23
CDPF1-202ENST00000381037 CERKQ8TCT0 537 aa28.98■■■□□ 2.23
CDPF1-202ENST00000381037 NWD1Q149M9 1564 aa28.98■■■□□ 2.23
CDPF1-202ENST00000381037 SETD1AO15047 1707 aaKnown RBP28.98■■■□□ 2.23
CDPF1-202ENST00000381037 PTPRUQ92729 1446 aa28.97■■■□□ 2.23
CDPF1-202ENST00000381037 CHD2O14647 1828 aaKnown RBP28.97■■■□□ 2.23
CDPF1-202ENST00000381037 KDM2AQ9Y2K7 1162 aa28.95■■■□□ 2.23
CDPF1-202ENST00000381037 L3MBTL2Q969R5 705 aa28.94■■■□□ 2.22
CDPF1-202ENST00000381037 C14orf93Q9H972 538 aaKnown RBP28.94■■■□□ 2.22
CDPF1-202ENST00000381037 LRRC7Q96NW7 1537 aa28.94■■■□□ 2.22
CDPF1-202ENST00000381037 CLSPNQ9HAW4 1339 aa28.92■■■□□ 2.22
CDPF1-202ENST00000381037 NKTRP30414 1462 aaKnown RBP28.91■■■□□ 2.22
CDPF1-202ENST00000381037 AMOTL2Q9Y2J4 779 aa28.91■■■□□ 2.22
CDPF1-202ENST00000381037 CFAP70Q5T0N1 1121 aa28.89■■■□□ 2.22
CDPF1-202ENST00000381037 IQSEC2Q5JU85 1478 aa28.89■■■□□ 2.21
CDPF1-202ENST00000381037 ASXL1Q8IXJ9 1541 aa28.88■■■□□ 2.21
CDPF1-202ENST00000381037 XRN1Q8IZH2 1706 aaKnown RBP28.87■■■□□ 2.21
CDPF1-202ENST00000381037 PRAG1Q86YV5 1406 aa28.85■■■□□ 2.21
CDPF1-202ENST00000381037 TMEM132EQ6IEE7 984 aa28.83■■■□□ 2.21
CDPF1-202ENST00000381037 PROSER2Q86WR7 435 aaPredicted RBP28.83■■■□□ 2.21
CDPF1-202ENST00000381037 TMEM94Q12767 1356 aa28.83■■■□□ 2.21
CDPF1-202ENST00000381037 LAMC1P11047 1609 aa28.83■■■□□ 2.21
CDPF1-202ENST00000381037 CCER1Q8TC90 406 aaPredicted RBP28.81■■■□□ 2.2
CDPF1-202ENST00000381037 XIRP1Q702N8 1843 aaKnown RBP28.81■■■□□ 2.2
CDPF1-202ENST00000381037 ADGRB1O14514 1584 aa28.8■■■□□ 2.2
CDPF1-202ENST00000381037 RBM33Q96EV2 1170 aaKnown RBP28.8■■■□□ 2.2
CDPF1-202ENST00000381037 LRPPRCP42704 1394 aaKnown RBP28.79■■■□□ 2.2
CDPF1-202ENST00000381037 TONSLQ96HA7 1378 aa28.79■■■□□ 2.2
CDPF1-202ENST00000381037 TECPR2O15040 1411 aa28.78■■■□□ 2.2
CDPF1-202ENST00000381037 ABCC11Q96J66 1382 aa28.77■■■□□ 2.2
CDPF1-202ENST00000381037 PTCH1Q13635 1447 aa28.77■■■□□ 2.2
CDPF1-202ENST00000381037 YTHDC2Q9H6S0 1430 aaKnown RBP28.77■■■□□ 2.2
CDPF1-202ENST00000381037 NCOA3Q9Y6Q9 1424 aa28.77■■■□□ 2.2
CDPF1-202ENST00000381037 ROBO2Q9HCK4 1378 aa28.77■■■□□ 2.2
CDPF1-202ENST00000381037 KIAA1210Q9ULL0 1709 aa28.73■■■□□ 2.19
CDPF1-202ENST00000381037 STK26Q9P289 416 aa28.72■■■□□ 2.19
CDPF1-202ENST00000381037 NBPF8Q3BBV2 869 aa28.71■■■□□ 2.19
CDPF1-202ENST00000381037 NBPF1Q3BBV0 1214 aa28.7■■■□□ 2.19
CDPF1-202ENST00000381037 TIMELESSQ9UNS1 1208 aa28.7■■■□□ 2.19
CDPF1-202ENST00000381037 SIRT1Q96EB6 747 aa28.69■■■□□ 2.18
CDPF1-202ENST00000381037 KNDC1Q76NI1 1749 aa28.69■■■□□ 2.18
CDPF1-202ENST00000381037 FBXO41Q8TF61 875 aa28.68■■■□□ 2.18
CDPF1-202ENST00000381037 FAM135BQ49AJ0 1406 aa28.66■■■□□ 2.18
CDPF1-202ENST00000381037 C19orf44Q9H6X5 657 aa28.65■■■□□ 2.18
CDPF1-202ENST00000381037 DLC1Q96QB1 1528 aa28.64■■■□□ 2.18
CDPF1-202ENST00000381037 TRPM1Q7Z4N2 1603 aa28.64■■■□□ 2.18
CDPF1-202ENST00000381037 UBAP1LF5GYI3 381 aa28.64■■■□□ 2.18
CDPF1-202ENST00000381037 WAPLQ7Z5K2 1190 aa28.64■■■□□ 2.18
CDPF1-202ENST00000381037 MSH6P52701 1360 aa28.64■■■□□ 2.17
CDPF1-202ENST00000381037 PLEKHH1Q9ULM0 1364 aa28.63■■■□□ 2.17
CDPF1-202ENST00000381037 ADGRL3Q9HAR2 1447 aa28.62■■■□□ 2.17
CDPF1-202ENST00000381037 TOM1O60784 492 aa28.61■■■□□ 2.17
CDPF1-202ENST00000381037 TRAK1Q9UPV9 953 aa28.61■■■□□ 2.17
CDPF1-202ENST00000381037 C14orf37Q86TY3 774 aa28.6■■■□□ 2.17
CDPF1-202ENST00000381037 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.59■■■□□ 2.17
CDPF1-202ENST00000381037 NALCNQ8IZF0 1738 aa28.58■■■□□ 2.17
CDPF1-202ENST00000381037 DCCP43146 1447 aa28.58■■■□□ 2.17
CDPF1-202ENST00000381037 GPRASP1Q5JY77 1395 aa28.58■■■□□ 2.17
CDPF1-202ENST00000381037 PRAM1Q96QH2 718 aa28.58■■■□□ 2.17
CDPF1-202ENST00000381037 RALGAPBQ86X10 1494 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms