RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 ZFYVE9O95405 1425 aa27.26■■□□□ 1.95
SMN2-202ENST00000380742 RIMS2Q9UQ26 1411 aa27.25■■□□□ 1.95
SMN2-202ENST00000380742 POLR1AO95602 1720 aaPredicted RBP27.25■■□□□ 1.95
SMN2-202ENST00000380742 RPGRIP1LQ68CZ1 1315 aa27.22■■□□□ 1.95
SMN2-202ENST00000380742 STRCQ7RTU9 1775 aa27.22■■□□□ 1.95
SMN2-202ENST00000380742 LTKP29376 864 aa27.21■■□□□ 1.95
SMN2-202ENST00000380742 NUTM2DQ5VT03 806 aaPredicted RBP27.21■■□□□ 1.95
SMN2-202ENST00000380742 TXNDC2Q86VQ3 553 aa27.19■■□□□ 1.94
SMN2-202ENST00000380742 L3MBTL2Q969R5 705 aa27.19■■□□□ 1.94
SMN2-202ENST00000380742 SCAF11Q99590 1463 aaKnown RBP27.18■■□□□ 1.94
SMN2-202ENST00000380742 TONSLQ96HA7 1378 aa27.18■■□□□ 1.94
SMN2-202ENST00000380742 ANKLE2Q86XL3 938 aa27.17■■□□□ 1.94
SMN2-202ENST00000380742 DCAF11Q8TEB1 546 aa27.17■■□□□ 1.94
SMN2-202ENST00000380742 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.16■■□□□ 1.94
SMN2-202ENST00000380742 EID1Q9Y6B2 187 aa27.16■■□□□ 1.94
SMN2-202ENST00000380742 NCKAP5LQ9HCH0 1330 aa27.15■■□□□ 1.94
SMN2-202ENST00000380742 HDGFP51858 240 aaKnown RBP27.15■■□□□ 1.94
SMN2-202ENST00000380742 MYOM2P54296 1465 aa27.14■■□□□ 1.94
SMN2-202ENST00000380742 KDM2AQ9Y2K7 1162 aa27.13■■□□□ 1.93
SMN2-202ENST00000380742 VGFO15240 615 aaPredicted RBP27.12■■□□□ 1.93
SMN2-202ENST00000380742 PPP1R15AO75807 674 aaPredicted RBP27.12■■□□□ 1.93
SMN2-202ENST00000380742 ADGRF5Q8IZF2 1346 aa27.12■■□□□ 1.93
SMN2-202ENST00000380742 MED14O60244 1454 aa27.11■■□□□ 1.93
SMN2-202ENST00000380742 IQGAP1P46940 1657 aa27.1■■□□□ 1.93
SMN2-202ENST00000380742 NRXN3Q9Y4C0 1643 aa27.09■■□□□ 1.93
SMN2-202ENST00000380742 NRXN1Q9ULB1 1477 aa27.09■■□□□ 1.93
SMN2-202ENST00000380742 SENP3Q9H4L4 574 aaPredicted RBP27.09■■□□□ 1.93
SMN2-202ENST00000380742 TIMELESSQ9UNS1 1208 aa27.09■■□□□ 1.93
SMN2-202ENST00000380742 PLEKHG1Q9ULL1 1385 aa27.08■■□□□ 1.93
SMN2-202ENST00000380742 STAC3Q96MF2 364 aa27.08■■□□□ 1.93
SMN2-202ENST00000380742 NPHP4O75161 1426 aaPredicted RBP27.07■■□□□ 1.92
SMN2-202ENST00000380742 SETBP1Q9Y6X0 1596 aa27.07■■□□□ 1.92
SMN2-202ENST00000380742 PIK3C2GO75747 1445 aa27.05■■□□□ 1.92
SMN2-202ENST00000380742 SETD1AO15047 1707 aaKnown RBP27.04■■□□□ 1.92
SMN2-202ENST00000380742 PRAG1Q86YV5 1406 aa27.02■■□□□ 1.92
SMN2-202ENST00000380742 ADAMTS13Q76LX8 1427 aa27.01■■□□□ 1.92
SMN2-202ENST00000380742 ALKQ9UM73 1620 aa27.01■■□□□ 1.91
SMN2-202ENST00000380742 BCANQ96GW7 911 aa27■■□□□ 1.91
SMN2-202ENST00000380742 LAMC1P11047 1609 aa26.98■■□□□ 1.91
SMN2-202ENST00000380742 NBPF8Q3BBV2 869 aa26.98■■□□□ 1.91
SMN2-202ENST00000380742 KIAA1210Q9ULL0 1709 aa26.98■■□□□ 1.91
SMN2-202ENST00000380742 SLC26A8Q96RN1 970 aa26.97■■□□□ 1.91
SMN2-202ENST00000380742 DIP2AQ14689 1571 aa26.97■■□□□ 1.91
SMN2-202ENST00000380742 TRPM1Q7Z4N2 1603 aa26.97■■□□□ 1.91
SMN2-202ENST00000380742 CFAP70Q5T0N1 1121 aa26.95■■□□□ 1.9
SMN2-202ENST00000380742 C14orf93Q9H972 538 aaKnown RBP26.95■■□□□ 1.9
SMN2-202ENST00000380742 TBX22Q9Y458 520 aa26.93■■□□□ 1.9
SMN2-202ENST00000380742 DMRT2Q9Y5R5 561 aa26.92■■□□□ 1.9
SMN2-202ENST00000380742 ASXL1Q8IXJ9 1541 aa26.91■■□□□ 1.9
SMN2-202ENST00000380742 CHD2O14647 1828 aaKnown RBP26.9■■□□□ 1.9
SMN2-202ENST00000380742 METP08581 1390 aa26.9■■□□□ 1.9
SMN2-202ENST00000380742 ADGRB1O14514 1584 aa26.87■■□□□ 1.89
SMN2-202ENST00000380742 NBPF1Q3BBV0 1214 aa26.86■■□□□ 1.89
SMN2-202ENST00000380742 TMEM132EQ6IEE7 984 aa26.86■■□□□ 1.89
SMN2-202ENST00000380742 STRCP1A6NGW2 1772 aa26.86■■□□□ 1.89
SMN2-202ENST00000380742 RALGAPBQ86X10 1494 aa26.85■■□□□ 1.89
SMN2-202ENST00000380742 PTPRUQ92729 1446 aa26.84■■□□□ 1.89
SMN2-202ENST00000380742 PIK3R4Q99570 1358 aa26.83■■□□□ 1.89
SMN2-202ENST00000380742 XRN1Q8IZH2 1706 aaKnown RBP26.81■■□□□ 1.88
SMN2-202ENST00000380742 NWD1Q149M9 1564 aa26.81■■□□□ 1.88
SMN2-202ENST00000380742 ROCK2O75116 1388 aaKnown RBP26.79■■□□□ 1.88
SMN2-202ENST00000380742 KNDC1Q76NI1 1749 aa26.79■■□□□ 1.88
SMN2-202ENST00000380742 YTHDC2Q9H6S0 1430 aaKnown RBP26.79■■□□□ 1.88
SMN2-202ENST00000380742 ZEB1P37275 1124 aaPredicted RBP26.79■■□□□ 1.88
SMN2-202ENST00000380742 GPRASP1Q5JY77 1395 aa26.78■■□□□ 1.88
SMN2-202ENST00000380742 KCNA6P17658 529 aa26.76■■□□□ 1.87
SMN2-202ENST00000380742 AMOTL2Q9Y2J4 779 aa26.76■■□□□ 1.87
SMN2-202ENST00000380742 ZNF335Q9H4Z2 1342 aaPredicted RBP26.76■■□□□ 1.87
SMN2-202ENST00000380742 LRPPRCP42704 1394 aaKnown RBP26.76■■□□□ 1.87
SMN2-202ENST00000380742 STK26Q9P289 416 aa26.75■■□□□ 1.87
SMN2-202ENST00000380742 ARHGEF28Q8N1W1 1705 aaKnown RBP26.74■■□□□ 1.87
SMN2-202ENST00000380742 ABCC11Q96J66 1382 aa26.72■■□□□ 1.87
SMN2-202ENST00000380742 CPS1P31327 1500 aa26.72■■□□□ 1.87
SMN2-202ENST00000380742 TECPR2O15040 1411 aa26.72■■□□□ 1.87
SMN2-202ENST00000380742 CARD11Q9BXL7 1154 aa26.71■■□□□ 1.87
SMN2-202ENST00000380742 TRAK1Q9UPV9 953 aa26.71■■□□□ 1.87
SMN2-202ENST00000380742 DLC1Q96QB1 1528 aa26.69■■□□□ 1.86
SMN2-202ENST00000380742 LTBP4Q8N2S1 1624 aa26.69■■□□□ 1.86
SMN2-202ENST00000380742 NKTRP30414 1462 aaKnown RBP26.68■■□□□ 1.86
SMN2-202ENST00000380742 ROBO2Q9HCK4 1378 aa26.68■■□□□ 1.86
SMN2-202ENST00000380742 XIRP1Q702N8 1843 aaKnown RBP26.67■■□□□ 1.86
SMN2-202ENST00000380742 PTCH1Q13635 1447 aa26.67■■□□□ 1.86
SMN2-202ENST00000380742 SIRT1Q96EB6 747 aa26.63■■□□□ 1.85
SMN2-202ENST00000380742 FAM135BQ49AJ0 1406 aa26.62■■□□□ 1.85
SMN2-202ENST00000380742 LRRC7Q96NW7 1537 aa26.62■■□□□ 1.85
SMN2-202ENST00000380742 WAPLQ7Z5K2 1190 aa26.62■■□□□ 1.85
SMN2-202ENST00000380742 PLEKHH1Q9ULM0 1364 aa26.62■■□□□ 1.85
SMN2-202ENST00000380742 PROSER2Q86WR7 435 aaPredicted RBP26.61■■□□□ 1.85
SMN2-202ENST00000380742 RBM33Q96EV2 1170 aaKnown RBP26.6■■□□□ 1.85
SMN2-202ENST00000380742 PRAM1Q96QH2 718 aa26.6■■□□□ 1.85
SMN2-202ENST00000380742 QRICH2Q9H0J4 1663 aa26.6■■□□□ 1.85
SMN2-202ENST00000380742 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.6■■□□□ 1.85
SMN2-202ENST00000380742 USP47Q96K76 1375 aa26.59■■□□□ 1.85
SMN2-202ENST00000380742 NALCNQ8IZF0 1738 aa26.58■■□□□ 1.85
SMN2-202ENST00000380742 TMEM94Q12767 1356 aa26.57■■□□□ 1.84
SMN2-202ENST00000380742 EIF3AQ14152 1382 aaKnown RBP26.57■■□□□ 1.84
SMN2-202ENST00000380742 POGKQ9P215 609 aa26.57■■□□□ 1.84
SMN2-202ENST00000380742 SAFB2Q14151 953 aaKnown RBP eCLIP26.56■■□□□ 1.84
SMN2-202ENST00000380742 CENPJQ9HC77 1338 aaPredicted RBP26.55■■□□□ 1.84
SMN2-202ENST00000380742 ST20-MTHFSA0A0A6YYL1 179 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 591.9 ms