RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 NLRP13Q86W25 1043 aa29.03■■■□□ 2.24
CNTFR-202ENST00000378980 NRXN1Q9ULB1 1477 aa29.03■■■□□ 2.24
CNTFR-202ENST00000378980 EIF3AQ14152 1382 aaKnown RBP29.02■■■□□ 2.24
CNTFR-202ENST00000378980 CFAP65Q6ZU64 1925 aaKnown RBP29.02■■■□□ 2.24
CNTFR-202ENST00000378980 GLI2P10070 1586 aa29.01■■■□□ 2.23
CNTFR-202ENST00000378980 CAMSAP1Q5T5Y3 1602 aa29.01■■■□□ 2.23
CNTFR-202ENST00000378980 RAPGEF3O95398 923 aa29.01■■■□□ 2.23
CNTFR-202ENST00000378980 SMG6Q86US8 1419 aaKnown RBP29.01■■■□□ 2.23
CNTFR-202ENST00000378980 GGT6Q6P531 493 aa29■■■□□ 2.23
CNTFR-202ENST00000378980 SYNMO15061 1565 aa29■■■□□ 2.23
CNTFR-202ENST00000378980 ADGRF5Q8IZF2 1346 aa28.99■■■□□ 2.23
CNTFR-202ENST00000378980 PPLO60437 1756 aa28.97■■■□□ 2.23
CNTFR-202ENST00000378980 CDCA8Q53HL2 280 aa28.97■■■□□ 2.23
CNTFR-202ENST00000378980 MYOM1P52179 1685 aa28.96■■■□□ 2.23
CNTFR-202ENST00000378980 ERICH6BQ5W0A0 696 aa28.96■■■□□ 2.23
CNTFR-202ENST00000378980 IRX6P78412 446 aaPredicted RBP28.95■■■□□ 2.23
CNTFR-202ENST00000378980 CFAP70Q5T0N1 1121 aa28.95■■■□□ 2.22
CNTFR-202ENST00000378980 TSHZ2Q9NRE2 1034 aa28.95■■■□□ 2.22
CNTFR-202ENST00000378980 KDM5AP29375 1690 aaKnown RBP28.94■■■□□ 2.22
CNTFR-202ENST00000378980 RIMBP3CA6NJZ7 1639 aa28.94■■■□□ 2.22
CNTFR-202ENST00000378980 RIMBP3BA6NNM3 1639 aa28.94■■■□□ 2.22
CNTFR-202ENST00000378980 RIMBP3Q9UFD9 1639 aa28.94■■■□□ 2.22
CNTFR-202ENST00000378980 SIGLEC1Q9BZZ2 1709 aa28.93■■■□□ 2.22
CNTFR-202ENST00000378980 NOS1P29475 1434 aa28.93■■■□□ 2.22
CNTFR-202ENST00000378980 CC2D1BQ5T0F9 858 aaKnown RBP28.93■■■□□ 2.22
CNTFR-202ENST00000378980 ZC3H13Q5T200 1668 aaKnown RBP28.92■■■□□ 2.22
CNTFR-202ENST00000378980 MYO3AQ8NEV4 1616 aa28.92■■■□□ 2.22
CNTFR-202ENST00000378980 SETBP1Q9Y6X0 1596 aa28.91■■■□□ 2.22
CNTFR-202ENST00000378980 CYB5RLQ6IPT4 315 aa28.91■■■□□ 2.22
CNTFR-202ENST00000378980 NUDCQ9Y266 331 aa28.91■■■□□ 2.22
CNTFR-202ENST00000378980 PIK3C2BO00750 1634 aa28.9■■■□□ 2.22
CNTFR-202ENST00000378980 PIK3C2GO75747 1445 aa28.86■■■□□ 2.21
CNTFR-202ENST00000378980 YEATS2Q9ULM3 1422 aa28.86■■■□□ 2.21
CNTFR-202ENST00000378980 CHGAP10645 457 aaKnown RBP28.86■■■□□ 2.21
CNTFR-202ENST00000378980 SLC24A1O60721 1099 aa28.85■■■□□ 2.21
CNTFR-202ENST00000378980 ZMYM4Q5VZL5 1548 aa28.85■■■□□ 2.21
CNTFR-202ENST00000378980 ARHGAP31Q2M1Z3 1444 aa28.85■■■□□ 2.21
CNTFR-202ENST00000378980 ERVK-7P63135 1459 aa28.85■■■□□ 2.21
CNTFR-202ENST00000378980 DIP2BQ9P265 1576 aa28.85■■■□□ 2.21
CNTFR-202ENST00000378980 INSRP06213 1382 aa28.83■■■□□ 2.21
CNTFR-202ENST00000378980 KNSTRNQ9Y448 316 aa28.83■■■□□ 2.21
CNTFR-202ENST00000378980 RPGRIP1LQ68CZ1 1315 aa28.82■■■□□ 2.2
CNTFR-202ENST00000378980 ASXL1Q8IXJ9 1541 aa28.82■■■□□ 2.2
CNTFR-202ENST00000378980 SBNO2Q9Y2G9 1366 aa28.81■■■□□ 2.2
CNTFR-202ENST00000378980 AMER1Q5JTC6 1135 aaPredicted RBP28.8■■■□□ 2.2
CNTFR-202ENST00000378980 SENP3-EIF4A1A0A087X0R7 540 aa28.79■■■□□ 2.2
CNTFR-202ENST00000378980 PPP4R2Q9NY27 417 aa28.79■■■□□ 2.2
CNTFR-202ENST00000378980 ADGRB1O14514 1584 aa28.79■■■□□ 2.2
CNTFR-202ENST00000378980 BLMP54132 1417 aaPredicted RBP28.78■■■□□ 2.2
CNTFR-202ENST00000378980 RNF123Q5XPI4 1314 aa28.77■■■□□ 2.2
CNTFR-202ENST00000378980 C14orf93Q9H972 538 aaKnown RBP28.77■■■□□ 2.2
CNTFR-202ENST00000378980 NPC1L1Q9UHC9 1359 aa28.77■■■□□ 2.2
CNTFR-202ENST00000378980 NEXMIFQ5QGS0 1516 aa28.75■■■□□ 2.19
CNTFR-202ENST00000378980 QRICH2Q9H0J4 1663 aa28.74■■■□□ 2.19
CNTFR-202ENST00000378980 FAM69CQ0P6D2 419 aa28.73■■■□□ 2.19
CNTFR-202ENST00000378980 TSPOAP1O95153 1857 aa28.72■■■□□ 2.19
CNTFR-202ENST00000378980 PREX1Q8TCU6 1659 aa28.72■■■□□ 2.19
CNTFR-202ENST00000378980 CENPJQ9HC77 1338 aaPredicted RBP28.72■■■□□ 2.19
CNTFR-202ENST00000378980 PPP2R1AP30153 589 aa28.71■■■□□ 2.19
CNTFR-202ENST00000378980 PDE3BQ13370 1112 aa28.67■■■□□ 2.18
CNTFR-202ENST00000378980 MYO5BQ9ULV0 1848 aa28.66■■■□□ 2.18
CNTFR-202ENST00000378980 REREQ9P2R6 1566 aa28.66■■■□□ 2.18
CNTFR-202ENST00000378980 TRAK1Q9UPV9 953 aa28.65■■■□□ 2.18
CNTFR-202ENST00000378980 SLC52A1Q9NWF4 448 aa28.65■■■□□ 2.18
CNTFR-202ENST00000378980 VGFO15240 615 aaPredicted RBP28.64■■■□□ 2.18
CNTFR-202ENST00000378980 ARHGEF28Q8N1W1 1705 aaKnown RBP28.64■■■□□ 2.17
CNTFR-202ENST00000378980 IDI1Q13907 227 aa28.63■■■□□ 2.17
CNTFR-202ENST00000378980 TMEM131LA2VDJ0 1609 aa28.62■■■□□ 2.17
CNTFR-202ENST00000378980 ZFYVE9O95405 1425 aa28.62■■■□□ 2.17
CNTFR-202ENST00000378980 TMEM132EQ6IEE7 984 aa28.62■■■□□ 2.17
CNTFR-202ENST00000378980 SALL2Q9Y467 1007 aaPredicted RBP28.61■■■□□ 2.17
CNTFR-202ENST00000378980 CARD14Q9BXL6 1004 aa28.59■■■□□ 2.17
CNTFR-202ENST00000378980 AGLP35573 1532 aa28.59■■■□□ 2.17
CNTFR-202ENST00000378980 ADAMTS8Q9UP79 889 aa28.58■■■□□ 2.17
CNTFR-202ENST00000378980 NUTM2DQ5VT03 806 aaPredicted RBP28.57■■■□□ 2.16
CNTFR-202ENST00000378980 B4GALNT3Q6L9W6 998 aa28.57■■■□□ 2.16
CNTFR-202ENST00000378980 WDR43Q15061 677 aaKnown RBP eCLIP28.55■■■□□ 2.16
CNTFR-202ENST00000378980 RCAN3Q9UKA8 241 aa28.51■■■□□ 2.15
CNTFR-202ENST00000378980 CDCA7LQ96GN5 454 aa28.5■■■□□ 2.15
CNTFR-202ENST00000378980 USP32Q8NFA0 1604 aa28.5■■■□□ 2.15
CNTFR-202ENST00000378980 TULP4Q9NRJ4 1543 aa28.5■■■□□ 2.15
CNTFR-202ENST00000378980 CLTCQ00610 1675 aaKnown RBP28.5■■■□□ 2.15
CNTFR-202ENST00000378980 KIF13AQ9H1H9 1805 aa28.5■■■□□ 2.15
CNTFR-202ENST00000378980 RRP1P56182 461 aaKnown RBP28.49■■■□□ 2.15
CNTFR-202ENST00000378980 PPP6R1Q9UPN7 881 aa28.49■■■□□ 2.15
CNTFR-202ENST00000378980 RBM19Q9Y4C8 960 aaKnown RBP28.49■■■□□ 2.15
CNTFR-202ENST00000378980 NSD3Q9BZ95 1437 aa28.48■■■□□ 2.15
CNTFR-202ENST00000378980 PUS7Q96PZ0 661 aaKnown RBP28.47■■■□□ 2.15
CNTFR-202ENST00000378980 FBXO31Q5XUX0 539 aaPredicted RBP28.47■■■□□ 2.15
CNTFR-202ENST00000378980 SLC12A5Q9H2X9 1139 aa28.45■■■□□ 2.14
CNTFR-202ENST00000378980 EVC2Q86UK5 1308 aa28.45■■■□□ 2.14
CNTFR-202ENST00000378980 ARHGEF40Q8TER5 1519 aa28.44■■■□□ 2.14
CNTFR-202ENST00000378980 PLEKHH1Q9ULM0 1364 aa28.43■■■□□ 2.14
CNTFR-202ENST00000378980 SPATA31D1Q6ZQQ2 1576 aa28.42■■■□□ 2.14
CNTFR-202ENST00000378980 ZNF521Q96K83 1311 aa28.39■■■□□ 2.14
CNTFR-202ENST00000378980 PTPRMP28827 1452 aa28.39■■■□□ 2.14
CNTFR-202ENST00000378980 CCDC136Q96JN2 1154 aa28.38■■■□□ 2.13
CNTFR-202ENST00000378980 POLR3AO14802 1390 aaPredicted RBP28.38■■■□□ 2.13
CNTFR-202ENST00000378980 ALKQ9UM73 1620 aa28.37■■■□□ 2.13
CNTFR-202ENST00000378980 ANKRD36BQ8N2N9 1353 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms