RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 NCOA2Q15596 1464 aa14.59□□□□□ -0.07
NPHS1-202ENST00000378910 TAOK2Q9UL54 1235 aa14.58□□□□□ -0.07
NPHS1-202ENST00000378910 KIAA2012Q0VF49 1180 aa14.58□□□□□ -0.08
NPHS1-202ENST00000378910 PSMD1Q99460 953 aa14.58□□□□□ -0.08
NPHS1-202ENST00000378910 LMOD3Q0VAK6 560 aa14.58□□□□□ -0.08
NPHS1-202ENST00000378910 RRP7AQ9Y3A4 280 aaKnown RBP14.57□□□□□ -0.08
NPHS1-202ENST00000378910 CUX1P39880 1505 aa14.57□□□□□ -0.08
NPHS1-202ENST00000378910 DDX49Q9Y6V7 483 aaKnown RBP14.56□□□□□ -0.08
NPHS1-202ENST00000378910 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.55□□□□□ -0.08
NPHS1-202ENST00000378910 ZNF644Q9H582 1327 aaPredicted RBP14.55□□□□□ -0.08
NPHS1-202ENST00000378910 HNRNPMP52272 730 aaKnown RBP eCLIP14.55□□□□□ -0.08
NPHS1-202ENST00000378910 GPATCH11Q8N954 259 aa14.55□□□□□ -0.08
NPHS1-202ENST00000378910 SKOR2Q2VWA4 1001 aaPredicted RBP14.55□□□□□ -0.08
NPHS1-202ENST00000378910 POGKQ9P215 609 aa14.55□□□□□ -0.08
NPHS1-202ENST00000378910 ADAMTS8Q9UP79 889 aa14.55□□□□□ -0.08
NPHS1-202ENST00000378910 CNKSR2Q8WXI2 1034 aa14.54□□□□□ -0.08
NPHS1-202ENST00000378910 CLSTN1O94985 981 aa14.54□□□□□ -0.08
NPHS1-202ENST00000378910 FGD5Q6ZNL6 1462 aa14.54□□□□□ -0.08
NPHS1-202ENST00000378910 CCDC144AA2RUR9 1427 aa14.54□□□□□ -0.08
NPHS1-202ENST00000378910 FYCO1Q9BQS8 1478 aa14.54□□□□□ -0.08
NPHS1-202ENST00000378910 BANK1Q8NDB2 785 aa14.53□□□□□ -0.08
NPHS1-202ENST00000378910 TNNT1P13805 278 aa14.53□□□□□ -0.08
NPHS1-202ENST00000378910 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.53□□□□□ -0.08
NPHS1-202ENST00000378910 APBB1O00213 710 aa14.53□□□□□ -0.08
NPHS1-202ENST00000378910 ZNF830Q96NB3 372 aaPredicted RBP14.53□□□□□ -0.08
NPHS1-202ENST00000378910 MAPKBP1O60336 1514 aa14.52□□□□□ -0.08
NPHS1-202ENST00000378910 SKAP1Q86WV1 359 aa14.52□□□□□ -0.08
NPHS1-202ENST00000378910 KIF3AQ9Y496 699 aa14.52□□□□□ -0.08
NPHS1-202ENST00000378910 NAIPQ13075 1403 aa14.52□□□□□ -0.09
NPHS1-202ENST00000378910 SSR1P43307 286 aaKnown RBP14.52□□□□□ -0.09
NPHS1-202ENST00000378910 TIGD1Q96MW7 591 aa14.52□□□□□ -0.09
NPHS1-202ENST00000378910 TOP2BQ02880 1626 aa14.51□□□□□ -0.09
NPHS1-202ENST00000378910 TRIM6-TRIM34B2RNG4 842 aa14.51□□□□□ -0.09
NPHS1-202ENST00000378910 TRIM34Q9BYJ4 488 aa14.51□□□□□ -0.09
NPHS1-202ENST00000378910 CFTRP13569 1480 aa14.51□□□□□ -0.09
NPHS1-202ENST00000378910 SOX12O15370 315 aa14.51□□□□□ -0.09
NPHS1-202ENST00000378910 PANK1Q8TE04 598 aa14.51□□□□□ -0.09
NPHS1-202ENST00000378910 UTP14CQ5TAP6 766 aaKnown RBP14.5□□□□□ -0.09
NPHS1-202ENST00000378910 MIA2Q96PC5 1412 aa14.5□□□□□ -0.09
NPHS1-202ENST00000378910 TRAK2O60296 914 aa14.5□□□□□ -0.09
NPHS1-202ENST00000378910 ZKSCAN2Q63HK3 967 aa14.5□□□□□ -0.09
NPHS1-202ENST00000378910 MCCP23508 829 aa14.5□□□□□ -0.09
NPHS1-202ENST00000378910 GTF2A1P52655 376 aaPredicted RBP14.5□□□□□ -0.09
NPHS1-202ENST00000378910 ZNF592Q92610 1267 aa14.5□□□□□ -0.09
NPHS1-202ENST00000378910 C22orf23Q9BZE7 217 aa14.49□□□□□ -0.09
NPHS1-202ENST00000378910 CALCOCO1Q9P1Z2 691 aa14.49□□□□□ -0.09
NPHS1-202ENST00000378910 PRDM4Q9UKN5 801 aa14.49□□□□□ -0.09
NPHS1-202ENST00000378910 DMTNQ08495 405 aa14.49□□□□□ -0.09
NPHS1-202ENST00000378910 EIF3AQ14152 1382 aaKnown RBP14.49□□□□□ -0.09
NPHS1-202ENST00000378910 NGEFQ8N5V2 710 aa14.49□□□□□ -0.09
NPHS1-202ENST00000378910 SYAP1Q96A49 352 aaPredicted RBP14.49□□□□□ -0.09
NPHS1-202ENST00000378910 SAFB2Q14151 953 aaKnown RBP eCLIP14.48□□□□□ -0.09
NPHS1-202ENST00000378910 TRERF1Q96PN7 1200 aa14.48□□□□□ -0.09
NPHS1-202ENST00000378910 CCDC94Q9BW85 323 aaPredicted RBP14.48□□□□□ -0.09
NPHS1-202ENST00000378910 NPM1P06748 294 aaKnown RBP eCLIP14.47□□□□□ -0.09
NPHS1-202ENST00000378910 SRPK2P78362 688 aaKnown RBP14.47□□□□□ -0.09
NPHS1-202ENST00000378910 DYNC1I1O14576 645 aa14.47□□□□□ -0.09
NPHS1-202ENST00000378910 ZRSR1Q15695 479 aaKnown RBP14.46□□□□□ -0.09
NPHS1-202ENST00000378910 ZSCAN30Q86W11 494 aa14.46□□□□□ -0.09
NPHS1-202ENST00000378910 NCOA1Q15788 1441 aa14.46□□□□□ -0.09
NPHS1-202ENST00000378910 GOLGA6L4A6NEF3 574 aa14.45□□□□□ -0.1
NPHS1-202ENST00000378910 KANK1Q14678 1352 aa14.45□□□□□ -0.1
NPHS1-202ENST00000378910 GRPEL1Q9HAV7 217 aa14.45□□□□□ -0.1
NPHS1-202ENST00000378910 DEF6Q9H4E7 631 aa14.44□□□□□ -0.1
NPHS1-202ENST00000378910 NOM1Q5C9Z4 860 aaKnown RBP14.44□□□□□ -0.1
NPHS1-202ENST00000378910 ANKRD45Q5TZF3 282 aa14.44□□□□□ -0.1
NPHS1-202ENST00000378910 DRC7Q8IY82 874 aa14.44□□□□□ -0.1
NPHS1-202ENST00000378910 RAD54L2Q9Y4B4 1467 aa14.44□□□□□ -0.1
NPHS1-202ENST00000378910 ERICH4A6NGS2 130 aa14.44□□□□□ -0.1
NPHS1-202ENST00000378910 RBM25P49756 843 aaKnown RBP14.44□□□□□ -0.1
NPHS1-202ENST00000378910 HMGN5P82970 282 aaKnown RBP14.44□□□□□ -0.1
NPHS1-202ENST00000378910 FOXD4L5Q5VV16 416 aaPredicted RBP14.44□□□□□ -0.1
NPHS1-202ENST00000378910 DZIP1LQ8IYY4 767 aaKnown RBP14.44□□□□□ -0.1
NPHS1-202ENST00000378910 FOXD4L4Q8WXT5 416 aaPredicted RBP14.44□□□□□ -0.1
NPHS1-202ENST00000378910 CARMIL2Q6F5E8 1435 aa14.43□□□□□ -0.1
NPHS1-202ENST00000378910 GOLIM4O00461 696 aa14.43□□□□□ -0.1
NPHS1-202ENST00000378910 ESF1Q9H501 851 aaKnown RBP14.43□□□□□ -0.1
NPHS1-202ENST00000378910 ST18O60284 1047 aa14.43□□□□□ -0.1
NPHS1-202ENST00000378910 MYCNP04198 464 aaPredicted RBP14.43□□□□□ -0.1
NPHS1-202ENST00000378910 BCAR3O75815 825 aa14.43□□□□□ -0.1
NPHS1-202ENST00000378910 FANCD2Q9BXW9 1451 aa14.42□□□□□ -0.1
NPHS1-202ENST00000378910 TDO2P48775 406 aa14.42□□□□□ -0.1
NPHS1-202ENST00000378910 DDX19BQ9UMR2 479 aa14.42□□□□□ -0.1
NPHS1-202ENST00000378910 C20orf194Q5TEA3 1177 aa14.41□□□□□ -0.1
NPHS1-202ENST00000378910 MAP3K1Q13233 1512 aa14.41□□□□□ -0.1
NPHS1-202ENST00000378910 CCDC173Q0VFZ6 552 aa14.41□□□□□ -0.1
NPHS1-202ENST00000378910 PDE3AQ14432 1141 aa14.41□□□□□ -0.1
NPHS1-202ENST00000378910 PDZRN3Q9UPQ7 1066 aa14.41□□□□□ -0.1
NPHS1-202ENST00000378910 ANKRD50Q9ULJ7 1429 aa14.41□□□□□ -0.1
NPHS1-202ENST00000378910 IGSF3O75054 1194 aa14.41□□□□□ -0.1
NPHS1-202ENST00000378910 PPP2R1AP30153 589 aa14.41□□□□□ -0.1
NPHS1-202ENST00000378910 ISY1Q9ULR0 285 aaKnown RBP14.41□□□□□ -0.1
NPHS1-202ENST00000378910 XRCC6P12956 609 aaKnown RBP eCLIP14.41□□□□□ -0.1
NPHS1-202ENST00000378910 MCM4P33991 863 aa14.4□□□□□ -0.1
NPHS1-202ENST00000378910 NASPP49321 788 aaPredicted RBP14.4□□□□□ -0.1
NPHS1-202ENST00000378910 TICAM2Q86XR7 235 aa14.4□□□□□ -0.1
NPHS1-202ENST00000378910 RGS22Q8NE09 1264 aa14.4□□□□□ -0.1
NPHS1-202ENST00000378910 NBPF1Q3BBV0 1214 aa14.4□□□□□ -0.1
NPHS1-202ENST00000378910 NOL8Q76FK4 1167 aaKnown RBP14.4□□□□□ -0.1
NPHS1-202ENST00000378910 PDCL2Q8N4E4 241 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms