RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 NEURL4Q96JN8 1562 aa27.46■■□□□ 1.99
SSU72-203ENST00000378725 MYO5BQ9ULV0 1848 aa27.45■■□□□ 1.98
SSU72-203ENST00000378725 SPATA31E1Q6ZUB1 1445 aa27.44■■□□□ 1.98
SSU72-203ENST00000378725 ZNF326Q5BKZ1 582 aaKnown RBP27.44■■□□□ 1.98
SSU72-203ENST00000378725 KIF1BO60333 1816 aa27.44■■□□□ 1.98
SSU72-203ENST00000378725 NPHP4O75161 1426 aaPredicted RBP27.43■■□□□ 1.98
SSU72-203ENST00000378725 POLR1AO95602 1720 aaPredicted RBP27.43■■□□□ 1.98
SSU72-203ENST00000378725 RPGRIP1LQ68CZ1 1315 aa27.42■■□□□ 1.98
SSU72-203ENST00000378725 PPP1R15AO75807 674 aaPredicted RBP27.37■■□□□ 1.97
SSU72-203ENST00000378725 RGL3Q3MIN7 710 aa27.37■■□□□ 1.97
SSU72-203ENST00000378725 NUTM2DQ5VT03 806 aaPredicted RBP27.37■■□□□ 1.97
SSU72-203ENST00000378725 NEXMIFQ5QGS0 1516 aa27.36■■□□□ 1.97
SSU72-203ENST00000378725 PLEKHG1Q9ULL1 1385 aa27.36■■□□□ 1.97
SSU72-203ENST00000378725 VGFO15240 615 aaPredicted RBP27.34■■□□□ 1.97
SSU72-203ENST00000378725 IQGAP1P46940 1657 aa27.33■■□□□ 1.97
SSU72-203ENST00000378725 SIN3AQ96ST3 1273 aa27.28■■□□□ 1.96
SSU72-203ENST00000378725 BCANQ96GW7 911 aa27.27■■□□□ 1.96
SSU72-203ENST00000378725 SLC26A8Q96RN1 970 aa27.27■■□□□ 1.96
SSU72-203ENST00000378725 TBX22Q9Y458 520 aa27.27■■□□□ 1.96
SSU72-203ENST00000378725 ADAMTS13Q76LX8 1427 aa27.25■■□□□ 1.95
SSU72-203ENST00000378725 PPLO60437 1756 aa27.25■■□□□ 1.95
SSU72-203ENST00000378725 ADGRF5Q8IZF2 1346 aa27.23■■□□□ 1.95
SSU72-203ENST00000378725 ZNF335Q9H4Z2 1342 aaPredicted RBP27.23■■□□□ 1.95
SSU72-203ENST00000378725 STAC3Q96MF2 364 aa27.23■■□□□ 1.95
SSU72-203ENST00000378725 SENP3Q9H4L4 574 aaPredicted RBP27.23■■□□□ 1.95
SSU72-203ENST00000378725 SETBP1Q9Y6X0 1596 aa27.22■■□□□ 1.95
SSU72-203ENST00000378725 IFT172Q9UG01 1749 aa27.21■■□□□ 1.95
SSU72-203ENST00000378725 NEUROD1Q13562 356 aa27.2■■□□□ 1.94
SSU72-203ENST00000378725 DCAF11Q8TEB1 546 aa27.19■■□□□ 1.94
SSU72-203ENST00000378725 NRXN3Q9Y4C0 1643 aa27.18■■□□□ 1.94
SSU72-203ENST00000378725 MYOM2P54296 1465 aa27.18■■□□□ 1.94
SSU72-203ENST00000378725 DIP2AQ14689 1571 aa27.18■■□□□ 1.94
SSU72-203ENST00000378725 LTBP4Q8N2S1 1624 aa27.17■■□□□ 1.94
SSU72-203ENST00000378725 CLSPNQ9HAW4 1339 aa27.16■■□□□ 1.94
SSU72-203ENST00000378725 NRXN1Q9ULB1 1477 aa27.16■■□□□ 1.94
SSU72-203ENST00000378725 PIK3R4Q99570 1358 aa27.15■■□□□ 1.94
SSU72-203ENST00000378725 KCNA6P17658 529 aa27.15■■□□□ 1.94
SSU72-203ENST00000378725 KDM2AQ9Y2K7 1162 aa27.14■■□□□ 1.94
SSU72-203ENST00000378725 PIK3C2GO75747 1445 aa27.14■■□□□ 1.93
SSU72-203ENST00000378725 L3MBTL2Q969R5 705 aa27.12■■□□□ 1.93
SSU72-203ENST00000378725 ALKQ9UM73 1620 aa27.11■■□□□ 1.93
SSU72-203ENST00000378725 METP08581 1390 aa27.1■■□□□ 1.93
SSU72-203ENST00000378725 C14orf93Q9H972 538 aaKnown RBP27.1■■□□□ 1.93
SSU72-203ENST00000378725 CPS1P31327 1500 aa27.09■■□□□ 1.93
SSU72-203ENST00000378725 CCER1Q8TC90 406 aaPredicted RBP27.08■■□□□ 1.93
SSU72-203ENST00000378725 CERKQ8TCT0 537 aa27.08■■□□□ 1.93
SSU72-203ENST00000378725 STRCP1A6NGW2 1772 aa27.07■■□□□ 1.92
SSU72-203ENST00000378725 PTPRUQ92729 1446 aa27.07■■□□□ 1.92
SSU72-203ENST00000378725 NWD1Q149M9 1564 aa27.05■■□□□ 1.92
SSU72-203ENST00000378725 CFAP70Q5T0N1 1121 aa27.05■■□□□ 1.92
SSU72-203ENST00000378725 AMOTL2Q9Y2J4 779 aa27.05■■□□□ 1.92
SSU72-203ENST00000378725 CHD2O14647 1828 aaKnown RBP27.04■■□□□ 1.92
SSU72-203ENST00000378725 SETD1AO15047 1707 aaKnown RBP27.04■■□□□ 1.92
SSU72-203ENST00000378725 LRRC7Q96NW7 1537 aa27■■□□□ 1.91
SSU72-203ENST00000378725 NKTRP30414 1462 aaKnown RBP27■■□□□ 1.91
SSU72-203ENST00000378725 TONSLQ96HA7 1378 aa27■■□□□ 1.91
SSU72-203ENST00000378725 PRAG1Q86YV5 1406 aa26.99■■□□□ 1.91
SSU72-203ENST00000378725 PROSER2Q86WR7 435 aaPredicted RBP26.99■■□□□ 1.91
SSU72-203ENST00000378725 TMEM132EQ6IEE7 984 aa26.98■■□□□ 1.91
SSU72-203ENST00000378725 IQSEC2Q5JU85 1478 aa26.98■■□□□ 1.91
SSU72-203ENST00000378725 TIMELESSQ9UNS1 1208 aa26.96■■□□□ 1.91
SSU72-203ENST00000378725 LAMC1P11047 1609 aa26.96■■□□□ 1.91
SSU72-203ENST00000378725 ASXL1Q8IXJ9 1541 aa26.95■■□□□ 1.91
SSU72-203ENST00000378725 XRN1Q8IZH2 1706 aaKnown RBP26.95■■□□□ 1.9
SSU72-203ENST00000378725 LRPPRCP42704 1394 aaKnown RBP26.95■■□□□ 1.9
SSU72-203ENST00000378725 ABCC11Q96J66 1382 aa26.94■■□□□ 1.9
SSU72-203ENST00000378725 TMEM94Q12767 1356 aa26.93■■□□□ 1.9
SSU72-203ENST00000378725 NCOA3Q9Y6Q9 1424 aa26.92■■□□□ 1.9
SSU72-203ENST00000378725 YTHDC2Q9H6S0 1430 aaKnown RBP26.91■■□□□ 1.9
SSU72-203ENST00000378725 ADGRB1O14514 1584 aa26.91■■□□□ 1.9
SSU72-203ENST00000378725 RBM33Q96EV2 1170 aaKnown RBP26.9■■□□□ 1.9
SSU72-203ENST00000378725 TECPR2O15040 1411 aa26.9■■□□□ 1.9
SSU72-203ENST00000378725 PTCH1Q13635 1447 aa26.9■■□□□ 1.9
SSU72-203ENST00000378725 ROBO2Q9HCK4 1378 aa26.89■■□□□ 1.9
SSU72-203ENST00000378725 NBPF8Q3BBV2 869 aa26.89■■□□□ 1.9
SSU72-203ENST00000378725 SIRT1Q96EB6 747 aa26.89■■□□□ 1.9
SSU72-203ENST00000378725 STK26Q9P289 416 aa26.89■■□□□ 1.9
SSU72-203ENST00000378725 NBPF1Q3BBV0 1214 aa26.87■■□□□ 1.89
SSU72-203ENST00000378725 KIAA1210Q9ULL0 1709 aa26.87■■□□□ 1.89
SSU72-203ENST00000378725 XIRP1Q702N8 1843 aaKnown RBP26.84■■□□□ 1.89
SSU72-203ENST00000378725 C19orf44Q9H6X5 657 aa26.82■■□□□ 1.88
SSU72-203ENST00000378725 FAM135BQ49AJ0 1406 aa26.82■■□□□ 1.88
SSU72-203ENST00000378725 KNDC1Q76NI1 1749 aa26.8■■□□□ 1.88
SSU72-203ENST00000378725 WAPLQ7Z5K2 1190 aa26.8■■□□□ 1.88
SSU72-203ENST00000378725 TRAK1Q9UPV9 953 aa26.8■■□□□ 1.88
SSU72-203ENST00000378725 DLC1Q96QB1 1528 aa26.8■■□□□ 1.88
SSU72-203ENST00000378725 MSH6P52701 1360 aa26.79■■□□□ 1.88
SSU72-203ENST00000378725 TRPM1Q7Z4N2 1603 aa26.79■■□□□ 1.88
SSU72-203ENST00000378725 TOM1O60784 492 aa26.77■■□□□ 1.88
SSU72-203ENST00000378725 C14orf37Q86TY3 774 aa26.77■■□□□ 1.88
SSU72-203ENST00000378725 FBXO41Q8TF61 875 aa26.77■■□□□ 1.88
SSU72-203ENST00000378725 PLEKHH1Q9ULM0 1364 aa26.76■■□□□ 1.87
SSU72-203ENST00000378725 UBAP1LF5GYI3 381 aa26.76■■□□□ 1.87
SSU72-203ENST00000378725 ROCK2O75116 1388 aaKnown RBP26.75■■□□□ 1.87
SSU72-203ENST00000378725 GPRASP1Q5JY77 1395 aa26.75■■□□□ 1.87
SSU72-203ENST00000378725 PRAM1Q96QH2 718 aa26.75■■□□□ 1.87
SSU72-203ENST00000378725 ADGRL3Q9HAR2 1447 aa26.74■■□□□ 1.87
SSU72-203ENST00000378725 CADPS2Q86UW7 1296 aa26.72■■□□□ 1.87
SSU72-203ENST00000378725 POGKQ9P215 609 aa26.72■■□□□ 1.87
SSU72-203ENST00000378725 RALGAPBQ86X10 1494 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms