RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 RPRD2Q5VT52 1461 aaKnown RBP30.47■■■□□ 2.47
CCDC107-202ENST00000378406 ANKRD50Q9ULJ7 1429 aa30.46■■■□□ 2.47
CCDC107-202ENST00000378406 ZFYVE9O95405 1425 aa30.43■■■□□ 2.46
CCDC107-202ENST00000378406 FAM50AQ14320 339 aaKnown RBP30.43■■■□□ 2.46
CCDC107-202ENST00000378406 MYO5BQ9ULV0 1848 aa30.41■■■□□ 2.46
CCDC107-202ENST00000378406 BCANQ96GW7 911 aa30.4■■■□□ 2.46
CCDC107-202ENST00000378406 PLEKHG1Q9ULL1 1385 aa30.39■■■□□ 2.45
CCDC107-202ENST00000378406 GCC2Q8IWJ2 1684 aa30.38■■■□□ 2.45
CCDC107-202ENST00000378406 TMEM131LA2VDJ0 1609 aa30.37■■■□□ 2.45
CCDC107-202ENST00000378406 MSH6P52701 1360 aa30.37■■■□□ 2.45
CCDC107-202ENST00000378406 RIMS2Q9UQ26 1411 aa30.37■■■□□ 2.45
CCDC107-202ENST00000378406 CHD2O14647 1828 aaKnown RBP30.36■■■□□ 2.45
CCDC107-202ENST00000378406 POTEAQ6S8J7 498 aa30.33■■■□□ 2.45
CCDC107-202ENST00000378406 UNC13BO14795 1591 aa30.32■■■□□ 2.45
CCDC107-202ENST00000378406 SLAIN2Q9P270 581 aa30.32■■■□□ 2.44
CCDC107-202ENST00000378406 PPP1R15AO75807 674 aaPredicted RBP30.31■■■□□ 2.44
CCDC107-202ENST00000378406 HDGFP51858 240 aaKnown RBP30.3■■■□□ 2.44
CCDC107-202ENST00000378406 PHLPP1O60346 1717 aa30.28■■■□□ 2.44
CCDC107-202ENST00000378406 TBX22Q9Y458 520 aa30.28■■■□□ 2.44
CCDC107-202ENST00000378406 E9PCH4 1651 aa30.27■■■□□ 2.44
CCDC107-202ENST00000378406 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.24■■■□□ 2.43
CCDC107-202ENST00000378406 ADAMTS13Q76LX8 1427 aa30.23■■■□□ 2.43
CCDC107-202ENST00000378406 NCOA3Q9Y6Q9 1424 aa30.23■■■□□ 2.43
CCDC107-202ENST00000378406 CHGAP10645 457 aaKnown RBP30.23■■■□□ 2.43
CCDC107-202ENST00000378406 JCADQ9P266 1359 aa30.22■■■□□ 2.43
CCDC107-202ENST00000378406 IQGAP3Q86VI3 1631 aa30.21■■■□□ 2.43
CCDC107-202ENST00000378406 ROCK1Q13464 1354 aa30.2■■■□□ 2.43
CCDC107-202ENST00000378406 NUTM2DQ5VT03 806 aaPredicted RBP30.2■■■□□ 2.43
CCDC107-202ENST00000378406 COL16A1Q07092 1604 aaPredicted RBP30.2■■■□□ 2.43
CCDC107-202ENST00000378406 DIP2AQ14689 1571 aa30.2■■■□□ 2.42
CCDC107-202ENST00000378406 PIK3R4Q99570 1358 aa30.16■■■□□ 2.42
CCDC107-202ENST00000378406 C14orf37Q86TY3 774 aa30.15■■■□□ 2.42
CCDC107-202ENST00000378406 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.15■■■□□ 2.42
CCDC107-202ENST00000378406 C19orf44Q9H6X5 657 aa30.12■■■□□ 2.41
CCDC107-202ENST00000378406 CADPS2Q86UW7 1296 aa30.11■■■□□ 2.41
CCDC107-202ENST00000378406 NUP155O75694 1391 aa30.11■■■□□ 2.41
CCDC107-202ENST00000378406 TRPM2O94759 1503 aa30.1■■■□□ 2.41
CCDC107-202ENST00000378406 LRP6O75581 1613 aa30.1■■■□□ 2.41
CCDC107-202ENST00000378406 SETD1AO15047 1707 aaKnown RBP30.09■■■□□ 2.41
CCDC107-202ENST00000378406 AHDC1Q5TGY3 1603 aaPredicted RBP30.09■■■□□ 2.41
CCDC107-202ENST00000378406 PTPRUQ92729 1446 aa30.09■■■□□ 2.41
CCDC107-202ENST00000378406 ATF3P18847 181 aa30.08■■■□□ 2.41
CCDC107-202ENST00000378406 SPATA31A6Q5VVP1 1343 aa30.07■■■□□ 2.4
CCDC107-202ENST00000378406 AMOTL2Q9Y2J4 779 aa30.07■■■□□ 2.4
CCDC107-202ENST00000378406 SHPRHQ149N8 1683 aa30.03■■■□□ 2.4
CCDC107-202ENST00000378406 NRXN3Q9Y4C0 1643 aa30.03■■■□□ 2.4
CCDC107-202ENST00000378406 ITGAEP38570 1179 aa30.02■■■□□ 2.4
CCDC107-202ENST00000378406 XRN1Q8IZH2 1706 aaKnown RBP30■■■□□ 2.39
CCDC107-202ENST00000378406 BRINP3Q76B58 766 aa30■■■□□ 2.39
CCDC107-202ENST00000378406 SETBP1Q9Y6X0 1596 aa29.99■■■□□ 2.39
CCDC107-202ENST00000378406 SPHKAPQ2M3C7 1700 aa29.99■■■□□ 2.39
CCDC107-202ENST00000378406 DCCP43146 1447 aa29.98■■■□□ 2.39
CCDC107-202ENST00000378406 MEX3CQ5U5Q3 659 aaKnown RBP29.98■■■□□ 2.39
CCDC107-202ENST00000378406 ZNF772Q68DY9 489 aaPredicted RBP29.95■■■□□ 2.39
CCDC107-202ENST00000378406 ASXL1Q8IXJ9 1541 aa29.93■■■□□ 2.38
CCDC107-202ENST00000378406 METP08581 1390 aa29.92■■■□□ 2.38
CCDC107-202ENST00000378406 MST1RQ04912 1400 aa29.91■■■□□ 2.38
CCDC107-202ENST00000378406 ZNF326Q5BKZ1 582 aaKnown RBP29.91■■■□□ 2.38
CCDC107-202ENST00000378406 PPARGC1BQ86YN6 1023 aaKnown RBP29.88■■■□□ 2.37
CCDC107-202ENST00000378406 SETD5Q9C0A6 1442 aa29.88■■■□□ 2.37
CCDC107-202ENST00000378406 NHSL1Q5SYE7 1610 aa29.87■■■□□ 2.37
CCDC107-202ENST00000378406 TRIM52Q96A61 297 aa29.87■■■□□ 2.37
CCDC107-202ENST00000378406 CLTCL1P53675 1640 aa29.86■■■□□ 2.37
CCDC107-202ENST00000378406 NUTM2BA6NNL0 878 aaPredicted RBP29.86■■■□□ 2.37
CCDC107-202ENST00000378406 NUTM2EB1AL46 878 aaPredicted RBP29.86■■■□□ 2.37
CCDC107-202ENST00000378406 NUTM2AQ8IVF1 878 aaPredicted RBP29.86■■■□□ 2.37
CCDC107-202ENST00000378406 NEXMIFQ5QGS0 1516 aa29.86■■■□□ 2.37
CCDC107-202ENST00000378406 ADGRL3Q9HAR2 1447 aa29.84■■■□□ 2.37
CCDC107-202ENST00000378406 UPF1Q92900 1129 aaKnown RBP eCLIP29.83■■■□□ 2.37
CCDC107-202ENST00000378406 RXRBP28702 533 aa29.81■■■□□ 2.36
CCDC107-202ENST00000378406 NALCNQ8IZF0 1738 aa29.81■■■□□ 2.36
CCDC107-202ENST00000378406 LRRC59Q96AG4 307 aaKnown RBP29.79■■■□□ 2.36
CCDC107-202ENST00000378406 AFF2P51816 1311 aa29.78■■■□□ 2.36
CCDC107-202ENST00000378406 DDX17Q92841 729 aaKnown RBP29.78■■■□□ 2.36
CCDC107-202ENST00000378406 CDK12Q9NYV4 1490 aaPredicted RBP29.77■■■□□ 2.36
CCDC107-202ENST00000378406 KIF1BO60333 1816 aa29.76■■■□□ 2.35
CCDC107-202ENST00000378406 PNPLA6Q8IY17 1366 aa29.75■■■□□ 2.35
CCDC107-202ENST00000378406 NAIPQ13075 1403 aa29.74■■■□□ 2.35
CCDC107-202ENST00000378406 RRBP1Q9P2E9 1410 aaKnown RBP29.71■■■□□ 2.35
CCDC107-202ENST00000378406 C1orf167Q5SNV9 1468 aa29.71■■■□□ 2.35
CCDC107-202ENST00000378406 PTCH1Q13635 1447 aa29.7■■■□□ 2.34
CCDC107-202ENST00000378406 C8orf37Q96NL8 207 aa29.69■■■□□ 2.34
CCDC107-202ENST00000378406 LAMC1P11047 1609 aa29.67■■■□□ 2.34
CCDC107-202ENST00000378406 ROBO2Q9HCK4 1378 aa29.67■■■□□ 2.34
CCDC107-202ENST00000378406 VGFO15240 615 aaPredicted RBP29.66■■■□□ 2.34
CCDC107-202ENST00000378406 PRAG1Q86YV5 1406 aa29.64■■■□□ 2.34
CCDC107-202ENST00000378406 QTRT2Q9H974 415 aaKnown RBP29.64■■■□□ 2.34
CCDC107-202ENST00000378406 RGS12O14924 1447 aa29.63■■■□□ 2.33
CCDC107-202ENST00000378406 RBM6P78332 1123 aaKnown RBP29.62■■■□□ 2.33
CCDC107-202ENST00000378406 ORAI2Q96SN7 254 aa29.62■■■□□ 2.33
CCDC107-202ENST00000378406 SOS2Q07890 1332 aaPredicted RBP29.61■■■□□ 2.33
CCDC107-202ENST00000378406 RPGRIP1LQ68CZ1 1315 aa29.6■■■□□ 2.33
CCDC107-202ENST00000378406 ADAMTS2O95450 1211 aa29.59■■■□□ 2.33
CCDC107-202ENST00000378406 HFM1A2PYH4 1435 aa29.58■■■□□ 2.33
CCDC107-202ENST00000378406 PPLO60437 1756 aa29.58■■■□□ 2.33
CCDC107-202ENST00000378406 NGLY1Q96IV0 654 aa29.57■■■□□ 2.32
CCDC107-202ENST00000378406 SLC4A1APQ9BWU0 796 aaKnown RBP29.54■■■□□ 2.32
CCDC107-202ENST00000378406 COL22A1Q8NFW1 1626 aaPredicted RBP29.49■■■□□ 2.31
CCDC107-202ENST00000378406 CDC42BPGQ6DT37 1551 aa29.48■■■□□ 2.31
CCDC107-202ENST00000378406 USP21Q9UK80 565 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms