RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 E9PSI1 815 aa17.94■□□□□ 0.46
PRDM16-203ENST00000378391 KIAA1107Q9UPP5 1409 aa17.94■□□□□ 0.46
PRDM16-203ENST00000378391 SKOR2Q2VWA4 1001 aaPredicted RBP17.94■□□□□ 0.46
PRDM16-203ENST00000378391 TRIM6-TRIM34B2RNG4 842 aa17.93■□□□□ 0.46
PRDM16-203ENST00000378391 PRDM2Q13029 1718 aa17.93■□□□□ 0.46
PRDM16-203ENST00000378391 ABCA10Q8WWZ4 1543 aa17.93■□□□□ 0.46
PRDM16-203ENST00000378391 TPM4P67936 248 aa17.93■□□□□ 0.46
PRDM16-203ENST00000378391 NPHP1O15259 732 aa17.93■□□□□ 0.46
PRDM16-203ENST00000378391 GPATCH3Q96I76 525 aa17.93■□□□□ 0.46
PRDM16-203ENST00000378391 DNMBPQ6XZF7 1577 aa17.92■□□□□ 0.46
PRDM16-203ENST00000378391 CUL7Q14999 1698 aa17.92■□□□□ 0.46
PRDM16-203ENST00000378391 ANKRD50Q9ULJ7 1429 aa17.92■□□□□ 0.46
PRDM16-203ENST00000378391 NGEFQ8N5V2 710 aa17.91■□□□□ 0.46
PRDM16-203ENST00000378391 RPRD2Q5VT52 1461 aaKnown RBP17.91■□□□□ 0.46
PRDM16-203ENST00000378391 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
PRDM16-203ENST00000378391 KIF3BO15066 747 aa17.89■□□□□ 0.46
PRDM16-203ENST00000378391 CDK13Q14004 1512 aaKnown RBP17.89■□□□□ 0.45
PRDM16-203ENST00000378391 CCDC34Q96HJ3 373 aa17.89■□□□□ 0.45
PRDM16-203ENST00000378391 ROCK1Q13464 1354 aa17.89■□□□□ 0.45
PRDM16-203ENST00000378391 DDX49Q9Y6V7 483 aaKnown RBP17.89■□□□□ 0.45
PRDM16-203ENST00000378391 ZKSCAN2Q63HK3 967 aa17.88■□□□□ 0.45
PRDM16-203ENST00000378391 EPRSP07814 1512 aaKnown RBP17.88■□□□□ 0.45
PRDM16-203ENST00000378391 MLECQ14165 292 aa17.88■□□□□ 0.45
PRDM16-203ENST00000378391 FRAT2O75474 233 aaPredicted RBP17.87■□□□□ 0.45
PRDM16-203ENST00000378391 ADAMTS8Q9UP79 889 aa17.87■□□□□ 0.45
PRDM16-203ENST00000378391 SLC4A10Q6U841 1118 aa17.86■□□□□ 0.45
PRDM16-203ENST00000378391 SKAP1Q86WV1 359 aa17.86■□□□□ 0.45
PRDM16-203ENST00000378391 CC2D2AQ9P2K1 1620 aa17.86■□□□□ 0.45
PRDM16-203ENST00000378391 APAF1O14727 1248 aa17.85■□□□□ 0.45
PRDM16-203ENST00000378391 NESP48681 1621 aa17.84■□□□□ 0.45
PRDM16-203ENST00000378391 KIF3AQ9Y496 699 aa17.84■□□□□ 0.45
PRDM16-203ENST00000378391 COG6Q9Y2V7 657 aa17.84■□□□□ 0.45
PRDM16-203ENST00000378391 KIF16BQ96L93 1317 aa17.84■□□□□ 0.45
PRDM16-203ENST00000378391 RRP7AQ9Y3A4 280 aaKnown RBP17.84■□□□□ 0.45
PRDM16-203ENST00000378391 NOC3LQ8WTT2 800 aaKnown RBP17.83■□□□□ 0.44
PRDM16-203ENST00000378391 ATP6V1DQ9Y5K8 247 aa17.83■□□□□ 0.44
PRDM16-203ENST00000378391 ANKRD45Q5TZF3 282 aa17.82■□□□□ 0.44
PRDM16-203ENST00000378391 NOL8Q76FK4 1167 aaKnown RBP17.82■□□□□ 0.44
PRDM16-203ENST00000378391 ABCC5O15440 1437 aa17.82■□□□□ 0.44
PRDM16-203ENST00000378391 UGGT2Q9NYU1 1516 aa17.81■□□□□ 0.44
PRDM16-203ENST00000378391 GRIN2BQ13224 1484 aa17.81■□□□□ 0.44
PRDM16-203ENST00000378391 HSP90B1P14625 803 aaKnown RBP17.81■□□□□ 0.44
PRDM16-203ENST00000378391 BCL2L13Q9BXK5 485 aa17.81■□□□□ 0.44
PRDM16-203ENST00000378391 NEFHP12036 1026 aa17.81■□□□□ 0.44
PRDM16-203ENST00000378391 CHMP5Q9NZZ3 219 aa17.81■□□□□ 0.44
PRDM16-203ENST00000378391 GORABQ5T7V8 394 aa17.8■□□□□ 0.44
PRDM16-203ENST00000378391 NBPF1Q3BBV0 1214 aa17.8■□□□□ 0.44
PRDM16-203ENST00000378391 TRAK1Q9UPV9 953 aa17.79■□□□□ 0.44
PRDM16-203ENST00000378391 DDX19BQ9UMR2 479 aa17.79■□□□□ 0.44
PRDM16-203ENST00000378391 WASHC2CQ9Y4E1 1318 aa17.78■□□□□ 0.44
PRDM16-203ENST00000378391 SNAPC4Q5SXM2 1469 aa17.78■□□□□ 0.44
PRDM16-203ENST00000378391 ZNF526Q8TF50 670 aaPredicted RBP17.77■□□□□ 0.44
PRDM16-203ENST00000378391 CTTNBP2Q8WZ74 1663 aa17.76■□□□□ 0.43
PRDM16-203ENST00000378391 AAMPQ13685 434 aa17.76■□□□□ 0.43
PRDM16-203ENST00000378391 CHMP4CQ96CF2 233 aa17.76■□□□□ 0.43
PRDM16-203ENST00000378391 PRG4Q92954 1404 aaPredicted RBP17.76■□□□□ 0.43
PRDM16-203ENST00000378391 REC8O95072 547 aa17.76■□□□□ 0.43
PRDM16-203ENST00000378391 FOXD4L5Q5VV16 416 aaPredicted RBP17.76■□□□□ 0.43
PRDM16-203ENST00000378391 FOXD4L4Q8WXT5 416 aaPredicted RBP17.76■□□□□ 0.43
PRDM16-203ENST00000378391 JPH4Q96JJ6 628 aa17.76■□□□□ 0.43
PRDM16-203ENST00000378391 THOC2Q8NI27 1593 aaKnown RBP17.76■□□□□ 0.43
PRDM16-203ENST00000378391 C20orf194Q5TEA3 1177 aa17.76■□□□□ 0.43
PRDM16-203ENST00000378391 PPP2R1AP30153 589 aa17.75■□□□□ 0.43
PRDM16-203ENST00000378391 TAF7LQ5H9L4 462 aa17.74■□□□□ 0.43
PRDM16-203ENST00000378391 SF3A1Q15459 793 aaKnown RBP17.74■□□□□ 0.43
PRDM16-203ENST00000378391 FAM43AQ8N2R8 423 aa17.74■□□□□ 0.43
PRDM16-203ENST00000378391 PANK1Q8TE04 598 aa17.74■□□□□ 0.43
PRDM16-203ENST00000378391 DZIP1LQ8IYY4 767 aaKnown RBP17.73■□□□□ 0.43
PRDM16-203ENST00000378391 CSB-PGBD3P0DP91 1061 aa17.73■□□□□ 0.43
PRDM16-203ENST00000378391 ELL2O00472 640 aaPredicted RBP17.73■□□□□ 0.43
PRDM16-203ENST00000378391 AMPHP49418 695 aa17.73■□□□□ 0.43
PRDM16-203ENST00000378391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.73■□□□□ 0.43
PRDM16-203ENST00000378391 RILPL2Q969X0 211 aa17.73■□□□□ 0.43
PRDM16-203ENST00000378391 DHX29Q7Z478 1369 aaKnown RBP17.73■□□□□ 0.43
PRDM16-203ENST00000378391 TRHP20396 242 aaPredicted RBP17.72■□□□□ 0.43
PRDM16-203ENST00000378391 CHMP3Q9Y3E7 222 aa17.72■□□□□ 0.43
PRDM16-203ENST00000378391 EVC2Q86UK5 1308 aa17.72■□□□□ 0.43
PRDM16-203ENST00000378391 C9orf84Q5VXU9 1444 aa17.72■□□□□ 0.43
PRDM16-203ENST00000378391 TCOF1Q13428 1488 aaKnown RBP17.72■□□□□ 0.43
PRDM16-203ENST00000378391 NOM1Q5C9Z4 860 aaKnown RBP17.71■□□□□ 0.43
PRDM16-203ENST00000378391 ISY1Q9ULR0 285 aaKnown RBP17.71■□□□□ 0.43
PRDM16-203ENST00000378391 TROQ12816 1431 aaPredicted RBP17.71■□□□□ 0.43
PRDM16-203ENST00000378391 GOLGA6L19H0YKK7 550 aa17.71■□□□□ 0.43
PRDM16-203ENST00000378391 IQGAP2Q13576 1575 aa17.7■□□□□ 0.42
PRDM16-203ENST00000378391 BCAR3O75815 825 aa17.7■□□□□ 0.42
PRDM16-203ENST00000378391 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
PRDM16-203ENST00000378391 CAMSAP2Q08AD1 1489 aa17.7■□□□□ 0.42
PRDM16-203ENST00000378391 ZNF330Q9Y3S2 320 aaPredicted RBP17.7■□□□□ 0.42
PRDM16-203ENST00000378391 API5Q9BZZ5 524 aaKnown RBP17.69■□□□□ 0.42
PRDM16-203ENST00000378391 RNF123Q5XPI4 1314 aa17.69■□□□□ 0.42
PRDM16-203ENST00000378391 VGFO15240 615 aaPredicted RBP17.69■□□□□ 0.42
PRDM16-203ENST00000378391 BECN2A8MW95 431 aa17.69■□□□□ 0.42
PRDM16-203ENST00000378391 H3BQV1 296 aa17.69■□□□□ 0.42
PRDM16-203ENST00000378391 TPM3P06753 285 aa17.69■□□□□ 0.42
PRDM16-203ENST00000378391 IFFO2Q5TF58 517 aa17.69■□□□□ 0.42
PRDM16-203ENST00000378391 ERBINQ96RT1 1412 aa17.68■□□□□ 0.42
PRDM16-203ENST00000378391 PDIA4P13667 645 aaKnown RBP17.68■□□□□ 0.42
PRDM16-203ENST00000378391 NUCB2P80303 420 aa17.68■□□□□ 0.42
PRDM16-203ENST00000378391 STAC3Q96MF2 364 aa17.68■□□□□ 0.42
PRDM16-203ENST00000378391 FAM184AQ8NB25 1140 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms