RNA–Protein interactions for RNA: ENST00000378045.4

FUNDC1-201, Transcript of FUN14 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FUNDC1, Length 1,196 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUNDC1-201ENST00000378045 RRBP1Q9P2E9 1410 aaKnown RBP19.46■□□□□ 0.71
FUNDC1-201ENST00000378045 CHGAP10645 457 aaKnown RBP19.46■□□□□ 0.71
FUNDC1-201ENST00000378045 TMEM131LA2VDJ0 1609 aa19.46■□□□□ 0.71
FUNDC1-201ENST00000378045 SLC26A8Q96RN1 970 aa19.45■□□□□ 0.7
FUNDC1-201ENST00000378045 BCANQ96GW7 911 aa19.44■□□□□ 0.7
FUNDC1-201ENST00000378045 NUTM2DQ5VT03 806 aaPredicted RBP19.43■□□□□ 0.7
FUNDC1-201ENST00000378045 RIMS2Q9UQ26 1411 aa19.42■□□□□ 0.7
FUNDC1-201ENST00000378045 TOM1O60784 492 aa19.41■□□□□ 0.7
FUNDC1-201ENST00000378045 HSPA1LP34931 641 aa19.41■□□□□ 0.7
FUNDC1-201ENST00000378045 RBM33Q96EV2 1170 aaKnown RBP19.41■□□□□ 0.7
FUNDC1-201ENST00000378045 SLC52A1Q9NWF4 448 aa19.41■□□□□ 0.7
FUNDC1-201ENST00000378045 SPHKAPQ2M3C7 1700 aa19.41■□□□□ 0.7
FUNDC1-201ENST00000378045 ZFYVE9O95405 1425 aa19.4■□□□□ 0.7
FUNDC1-201ENST00000378045 PPP1R15AO75807 674 aaPredicted RBP19.39■□□□□ 0.69
FUNDC1-201ENST00000378045 NAIPQ13075 1403 aa19.37■□□□□ 0.69
FUNDC1-201ENST00000378045 ILDR2Q71H61 639 aa19.36■□□□□ 0.69
FUNDC1-201ENST00000378045 NWD1Q149M9 1564 aa19.35■□□□□ 0.69
FUNDC1-201ENST00000378045 TMEM94Q12767 1356 aa19.33■□□□□ 0.69
FUNDC1-201ENST00000378045 PLEKHG1Q9ULL1 1385 aa19.33■□□□□ 0.69
FUNDC1-201ENST00000378045 CLTCL1P53675 1640 aa19.33■□□□□ 0.69
FUNDC1-201ENST00000378045 MED1Q15648 1581 aaPredicted RBP19.32■□□□□ 0.68
FUNDC1-201ENST00000378045 CHD2O14647 1828 aaKnown RBP19.31■□□□□ 0.68
FUNDC1-201ENST00000378045 KCNA6P17658 529 aa19.3■□□□□ 0.68
FUNDC1-201ENST00000378045 PROSER2Q86WR7 435 aaPredicted RBP19.3■□□□□ 0.68
FUNDC1-201ENST00000378045 TRIM52Q96A61 297 aa19.3■□□□□ 0.68
FUNDC1-201ENST00000378045 NKTRP30414 1462 aaKnown RBP19.28■□□□□ 0.68
FUNDC1-201ENST00000378045 HFM1A2PYH4 1435 aa19.27■□□□□ 0.68
FUNDC1-201ENST00000378045 ADAMTS13Q76LX8 1427 aa19.27■□□□□ 0.68
FUNDC1-201ENST00000378045 TRPM2O94759 1503 aa19.26■□□□□ 0.67
FUNDC1-201ENST00000378045 ZNF326Q5BKZ1 582 aaKnown RBP19.26■□□□□ 0.67
FUNDC1-201ENST00000378045 NRXN3Q9Y4C0 1643 aa19.25■□□□□ 0.67
FUNDC1-201ENST00000378045 ROBO1Q9Y6N7 1651 aa19.25■□□□□ 0.67
FUNDC1-201ENST00000378045 KIF1BO60333 1816 aa19.25■□□□□ 0.67
FUNDC1-201ENST00000378045 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.24■□□□□ 0.67
FUNDC1-201ENST00000378045 DIP2AQ14689 1571 aa19.23■□□□□ 0.67
FUNDC1-201ENST00000378045 HDGFP51858 240 aaKnown RBP19.23■□□□□ 0.67
FUNDC1-201ENST00000378045 NEXMIFQ5QGS0 1516 aa19.21■□□□□ 0.67
FUNDC1-201ENST00000378045 PTPRUQ92729 1446 aa19.2■□□□□ 0.66
FUNDC1-201ENST00000378045 MSH6P52701 1360 aa19.19■□□□□ 0.66
FUNDC1-201ENST00000378045 C14orf37Q86TY3 774 aa19.19■□□□□ 0.66
FUNDC1-201ENST00000378045 SLC4A1APQ9BWU0 796 aaKnown RBP19.19■□□□□ 0.66
FUNDC1-201ENST00000378045 TBX22Q9Y458 520 aa19.19■□□□□ 0.66
FUNDC1-201ENST00000378045 SETBP1Q9Y6X0 1596 aa19.18■□□□□ 0.66
FUNDC1-201ENST00000378045 XRN1Q8IZH2 1706 aaKnown RBP19.17■□□□□ 0.66
FUNDC1-201ENST00000378045 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.17■□□□□ 0.66
FUNDC1-201ENST00000378045 PHLPP1O60346 1717 aa19.14■□□□□ 0.66
FUNDC1-201ENST00000378045 AMOTL2Q9Y2J4 779 aa19.13■□□□□ 0.65
FUNDC1-201ENST00000378045 METP08581 1390 aa19.13■□□□□ 0.65
FUNDC1-201ENST00000378045 FAM135BQ49AJ0 1406 aa19.13■□□□□ 0.65
FUNDC1-201ENST00000378045 PPLO60437 1756 aa19.11■□□□□ 0.65
FUNDC1-201ENST00000378045 SETD1AO15047 1707 aaKnown RBP19.11■□□□□ 0.65
FUNDC1-201ENST00000378045 PIK3R4Q99570 1358 aa19.1■□□□□ 0.65
FUNDC1-201ENST00000378045 SLAIN2Q9P270 581 aa19.09■□□□□ 0.65
FUNDC1-201ENST00000378045 NALCNQ8IZF0 1738 aa19.08■□□□□ 0.65
FUNDC1-201ENST00000378045 SOCS7O14512 581 aa19.08■□□□□ 0.64
FUNDC1-201ENST00000378045 COL16A1Q07092 1604 aaPredicted RBP19.06■□□□□ 0.64
FUNDC1-201ENST00000378045 CCDC144AA2RUR9 1427 aa19.04■□□□□ 0.64
FUNDC1-201ENST00000378045 ATF3P18847 181 aa19.04■□□□□ 0.64
FUNDC1-201ENST00000378045 MPHOSPH9Q99550 1183 aa19.04■□□□□ 0.64
FUNDC1-201ENST00000378045 NCOA3Q9Y6Q9 1424 aa19.03■□□□□ 0.64
FUNDC1-201ENST00000378045 RGL3Q3MIN7 710 aa19.03■□□□□ 0.64
FUNDC1-201ENST00000378045 IFT172Q9UG01 1749 aa19.03■□□□□ 0.64
FUNDC1-201ENST00000378045 SETD5Q9C0A6 1442 aa19.02■□□□□ 0.64
FUNDC1-201ENST00000378045 C19orf44Q9H6X5 657 aa19.02■□□□□ 0.64
FUNDC1-201ENST00000378045 CADPS2Q86UW7 1296 aa19■□□□□ 0.63
FUNDC1-201ENST00000378045 RAB3GAP2Q9H2M9 1393 aa19■□□□□ 0.63
FUNDC1-201ENST00000378045 AHDC1Q5TGY3 1603 aaPredicted RBP18.99■□□□□ 0.63
FUNDC1-201ENST00000378045 ASXL1Q8IXJ9 1541 aa18.99■□□□□ 0.63
FUNDC1-201ENST00000378045 ADGRL3Q9HAR2 1447 aa18.99■□□□□ 0.63
FUNDC1-201ENST00000378045 ROBO2Q9HCK4 1378 aa18.98■□□□□ 0.63
FUNDC1-201ENST00000378045 VGFO15240 615 aaPredicted RBP18.98■□□□□ 0.63
FUNDC1-201ENST00000378045 MST1RQ04912 1400 aa18.98■□□□□ 0.63
FUNDC1-201ENST00000378045 ADGRF5Q8IZF2 1346 aa18.98■□□□□ 0.63
FUNDC1-201ENST00000378045 BRINP3Q76B58 766 aa18.97■□□□□ 0.63
FUNDC1-201ENST00000378045 RGS17Q9UGC6 210 aaPredicted RBP18.97■□□□□ 0.63
FUNDC1-201ENST00000378045 SPATA31E1Q6ZUB1 1445 aa18.97■□□□□ 0.63
FUNDC1-201ENST00000378045 DCCP43146 1447 aa18.96■□□□□ 0.63
FUNDC1-201ENST00000378045 RPGRIP1LQ68CZ1 1315 aa18.96■□□□□ 0.63
FUNDC1-201ENST00000378045 JCADQ9P266 1359 aa18.95■□□□□ 0.62
FUNDC1-201ENST00000378045 DDX17Q92841 729 aaKnown RBP18.95■□□□□ 0.62
FUNDC1-201ENST00000378045 LRP6O75581 1613 aa18.95■□□□□ 0.62
FUNDC1-201ENST00000378045 PTCH1Q13635 1447 aa18.94■□□□□ 0.62
FUNDC1-201ENST00000378045 NHSL1Q5SYE7 1610 aa18.94■□□□□ 0.62
FUNDC1-201ENST00000378045 SHPRHQ149N8 1683 aa18.93■□□□□ 0.62
FUNDC1-201ENST00000378045 STK26Q9P289 416 aa18.92■□□□□ 0.62
FUNDC1-201ENST00000378045 TMEM132EQ6IEE7 984 aa18.89■□□□□ 0.61
FUNDC1-201ENST00000378045 POTEAQ6S8J7 498 aa18.89■□□□□ 0.61
FUNDC1-201ENST00000378045 NUTM2BA6NNL0 878 aaPredicted RBP18.88■□□□□ 0.61
FUNDC1-201ENST00000378045 NUTM2EB1AL46 878 aaPredicted RBP18.88■□□□□ 0.61
FUNDC1-201ENST00000378045 NUTM2AQ8IVF1 878 aaPredicted RBP18.88■□□□□ 0.61
FUNDC1-201ENST00000378045 PIK3C2GO75747 1445 aa18.88■□□□□ 0.61
FUNDC1-201ENST00000378045 C1orf167Q5SNV9 1468 aa18.88■□□□□ 0.61
FUNDC1-201ENST00000378045 MEX3CQ5U5Q3 659 aaKnown RBP18.87■□□□□ 0.61
FUNDC1-201ENST00000378045 KNDC1Q76NI1 1749 aa18.87■□□□□ 0.61
FUNDC1-201ENST00000378045 ANKRD30BQ9BXX2 1392 aa18.87■□□□□ 0.61
FUNDC1-201ENST00000378045 PLEKHH1Q9ULM0 1364 aa18.86■□□□□ 0.61
FUNDC1-201ENST00000378045 WAPLQ7Z5K2 1190 aa18.85■□□□□ 0.61
FUNDC1-201ENST00000378045 PRAG1Q86YV5 1406 aa18.84■□□□□ 0.61
FUNDC1-201ENST00000378045 NUTM2FA1L443 756 aa18.84■□□□□ 0.61
FUNDC1-201ENST00000378045 ORAI2Q96SN7 254 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms