RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 PTPN23Q9H3S7 1636 aa10.75□□□□□ -0.69
CKAP2-203ENST00000378037 PLEKHH2Q8IVE3 1493 aa10.75□□□□□ -0.69
CKAP2-203ENST00000378037 PLCH2O75038 1416 aa10.75□□□□□ -0.69
CKAP2-203ENST00000378037 CCDC7Q96M83 1385 aa10.75□□□□□ -0.69
CKAP2-203ENST00000378037 ZNF428Q96B54 188 aa10.75□□□□□ -0.69
CKAP2-203ENST00000378037 U2AF1L5P0DN76 240 aaPredicted RBP10.74□□□□□ -0.69
CKAP2-203ENST00000378037 U2AF1Q01081 240 aaKnown RBP eCLIP10.74□□□□□ -0.69
CKAP2-203ENST00000378037 LTV1Q96GA3 475 aaPredicted RBP10.74□□□□□ -0.69
CKAP2-203ENST00000378037 GPATCH8Q9UKJ3 1502 aaKnown RBP10.74□□□□□ -0.69
CKAP2-203ENST00000378037 GGNBP2Q9H3C7 697 aa10.74□□□□□ -0.69
CKAP2-203ENST00000378037 NCOA1Q15788 1441 aa10.74□□□□□ -0.69
CKAP2-203ENST00000378037 DIP2CQ9Y2E4 1556 aa10.74□□□□□ -0.69
CKAP2-203ENST00000378037 SLC26A8Q96RN1 970 aa10.73□□□□□ -0.69
CKAP2-203ENST00000378037 ABCA6Q8N139 1617 aa10.72□□□□□ -0.69
CKAP2-203ENST00000378037 NEFMP07197 916 aa10.72□□□□□ -0.69
CKAP2-203ENST00000378037 VWDEQ8N2E2 1590 aa10.72□□□□□ -0.69
CKAP2-203ENST00000378037 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
CKAP2-203ENST00000378037 CFAP65Q6ZU64 1925 aaKnown RBP10.71□□□□□ -0.69
CKAP2-203ENST00000378037 ANKRD30BQ9BXX2 1392 aa10.71□□□□□ -0.69
CKAP2-203ENST00000378037 RSPH4AQ5TD94 716 aa10.71□□□□□ -0.7
CKAP2-203ENST00000378037 ARXQ96QS3 562 aa10.71□□□□□ -0.7
CKAP2-203ENST00000378037 ADGRF5Q8IZF2 1346 aa10.71□□□□□ -0.7
CKAP2-203ENST00000378037 CCER2I3L3R5 266 aa10.7□□□□□ -0.7
CKAP2-203ENST00000378037 RTEL1-TNFRSF6BF6WH68 1400 aa10.7□□□□□ -0.7
CKAP2-203ENST00000378037 APAF1O14727 1248 aa10.7□□□□□ -0.7
CKAP2-203ENST00000378037 POGZQ7Z3K3 1410 aa10.7□□□□□ -0.7
CKAP2-203ENST00000378037 ZFYVE16Q7Z3T8 1539 aa10.7□□□□□ -0.7
CKAP2-203ENST00000378037 DNMT1P26358 1616 aaKnown RBP10.69□□□□□ -0.7
CKAP2-203ENST00000378037 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.69□□□□□ -0.7
CKAP2-203ENST00000378037 WAPLQ7Z5K2 1190 aa10.69□□□□□ -0.7
CKAP2-203ENST00000378037 TXNDC2Q86VQ3 553 aa10.69□□□□□ -0.7
CKAP2-203ENST00000378037 KTN1Q86UP2 1357 aaKnown RBP10.69□□□□□ -0.7
CKAP2-203ENST00000378037 TRAPPC8Q9Y2L5 1435 aa10.68□□□□□ -0.7
CKAP2-203ENST00000378037 TSPOAP1O95153 1857 aa10.68□□□□□ -0.7
CKAP2-203ENST00000378037 NEURL4Q96JN8 1562 aa10.68□□□□□ -0.7
CKAP2-203ENST00000378037 APBB1O00213 710 aa10.67□□□□□ -0.7
CKAP2-203ENST00000378037 MIA2Q96PC5 1412 aa10.67□□□□□ -0.7
CKAP2-203ENST00000378037 ADAMTS8Q9UP79 889 aa10.67□□□□□ -0.7
CKAP2-203ENST00000378037 PMFBP1Q8TBY8 1022 aa10.66□□□□□ -0.7
CKAP2-203ENST00000378037 HMOX1P09601 288 aa10.66□□□□□ -0.7
CKAP2-203ENST00000378037 PREX1Q8TCU6 1659 aa10.66□□□□□ -0.7
CKAP2-203ENST00000378037 LMTK2Q8IWU2 1503 aa10.66□□□□□ -0.7
CKAP2-203ENST00000378037 MROH1Q8NDA8 1641 aa10.66□□□□□ -0.7
CKAP2-203ENST00000378037 XPCQ01831 940 aaPredicted RBP10.65□□□□□ -0.7
CKAP2-203ENST00000378037 IDI1Q13907 227 aa10.65□□□□□ -0.7
CKAP2-203ENST00000378037 ADGRL2O95490 1459 aa10.65□□□□□ -0.7
CKAP2-203ENST00000378037 PRAM1Q96QH2 718 aa10.65□□□□□ -0.7
CKAP2-203ENST00000378037 UNC13BO14795 1591 aa10.65□□□□□ -0.7
CKAP2-203ENST00000378037 COL17A1Q9UMD9 1497 aaPredicted RBP10.64□□□□□ -0.71
CKAP2-203ENST00000378037 GCC2Q8IWJ2 1684 aa10.64□□□□□ -0.71
CKAP2-203ENST00000378037 NLRP13Q86W25 1043 aa10.64□□□□□ -0.71
CKAP2-203ENST00000378037 EXOC6Q8TAG9 804 aa10.64□□□□□ -0.71
CKAP2-203ENST00000378037 TSHZ2Q9NRE2 1034 aa10.64□□□□□ -0.71
CKAP2-203ENST00000378037 CDCA8Q53HL2 280 aa10.64□□□□□ -0.71
CKAP2-203ENST00000378037 ZNF518AQ6AHZ1 1483 aa10.64□□□□□ -0.71
CKAP2-203ENST00000378037 NCKAP5LQ9HCH0 1330 aa10.63□□□□□ -0.71
CKAP2-203ENST00000378037 CD109Q6YHK3 1445 aa10.63□□□□□ -0.71
CKAP2-203ENST00000378037 SYCP2Q9BX26 1530 aa10.63□□□□□ -0.71
CKAP2-203ENST00000378037 RCAN3Q9UKA8 241 aa10.63□□□□□ -0.71
CKAP2-203ENST00000378037 MBD5Q9P267 1494 aa10.63□□□□□ -0.71
CKAP2-203ENST00000378037 AKNAQ7Z591 1439 aa10.62□□□□□ -0.71
CKAP2-203ENST00000378037 NECTIN2Q92692 538 aa10.62□□□□□ -0.71
CKAP2-203ENST00000378037 PRDM15P57071 1507 aaPredicted RBP10.62□□□□□ -0.71
CKAP2-203ENST00000378037 MAPK8IP3Q9UPT6 1336 aa10.61□□□□□ -0.71
CKAP2-203ENST00000378037 CFAP53Q96M91 514 aa10.61□□□□□ -0.71
CKAP2-203ENST00000378037 ADGRL1O94910 1474 aa10.6□□□□□ -0.71
CKAP2-203ENST00000378037 CENPJQ9HC77 1338 aaPredicted RBP10.6□□□□□ -0.71
CKAP2-203ENST00000378037 MTHFSP49914 203 aa10.6□□□□□ -0.71
CKAP2-203ENST00000378037 RBM19Q9Y4C8 960 aaKnown RBP10.6□□□□□ -0.71
CKAP2-203ENST00000378037 NGDNQ8NEJ9 315 aaKnown RBP10.6□□□□□ -0.71
CKAP2-203ENST00000378037 CCDC141Q6ZP82 1450 aa10.6□□□□□ -0.71
CKAP2-203ENST00000378037 HAP1P54257 671 aaPredicted RBP10.59□□□□□ -0.71
CKAP2-203ENST00000378037 CABP1Q9NZU7 370 aa10.59□□□□□ -0.71
CKAP2-203ENST00000378037 FANCAO15360 1455 aa10.59□□□□□ -0.71
CKAP2-203ENST00000378037 MYBBP1AQ9BQG0 1328 aaKnown RBP10.59□□□□□ -0.71
CKAP2-203ENST00000378037 CNTLNQ9NXG0 1405 aa10.59□□□□□ -0.71
CKAP2-203ENST00000378037 VGFO15240 615 aaPredicted RBP10.59□□□□□ -0.71
CKAP2-203ENST00000378037 C3P01024 1663 aa10.59□□□□□ -0.71
CKAP2-203ENST00000378037 SPRYD3Q8NCJ5 442 aa10.58□□□□□ -0.72
CKAP2-203ENST00000378037 DISP3Q9P2K9 1392 aa10.58□□□□□ -0.72
CKAP2-203ENST00000378037 ERBINQ96RT1 1412 aa10.58□□□□□ -0.72
CKAP2-203ENST00000378037 TPRNQ4KMQ1 711 aa10.58□□□□□ -0.72
CKAP2-203ENST00000378037 THUMPD2Q9BTF0 503 aaKnown RBP10.58□□□□□ -0.72
CKAP2-203ENST00000378037 PPP4R2Q9NY27 417 aa10.58□□□□□ -0.72
CKAP2-203ENST00000378037 RRS1Q15050 365 aaKnown RBP10.57□□□□□ -0.72
CKAP2-203ENST00000378037 NUDCQ9Y266 331 aa10.57□□□□□ -0.72
CKAP2-203ENST00000378037 ATP7AQ04656 1500 aa10.57□□□□□ -0.72
CKAP2-203ENST00000378037 RALBP1Q15311 655 aa10.57□□□□□ -0.72
CKAP2-203ENST00000378037 FTSJ3Q8IY81 847 aaKnown RBP10.57□□□□□ -0.72
CKAP2-203ENST00000378037 PIK3C2BO00750 1634 aa10.57□□□□□ -0.72
CKAP2-203ENST00000378037 SLC4A3P48751 1232 aa10.56□□□□□ -0.72
CKAP2-203ENST00000378037 PNISRQ8TF01 805 aaKnown RBP10.56□□□□□ -0.72
CKAP2-203ENST00000378037 COG6Q9Y2V7 657 aa10.56□□□□□ -0.72
CKAP2-203ENST00000378037 ANP32AP39687 249 aaKnown RBP10.56□□□□□ -0.72
CKAP2-203ENST00000378037 TSR2Q969E8 191 aaKnown RBP10.56□□□□□ -0.72
CKAP2-203ENST00000378037 DENND4BO75064 1496 aaPredicted RBP10.55□□□□□ -0.72
CKAP2-203ENST00000378037 HDGFL2Q7Z4V5 671 aaPredicted RBP10.55□□□□□ -0.72
CKAP2-203ENST00000378037 CRBNQ96SW2 442 aa10.55□□□□□ -0.72
CKAP2-203ENST00000378037 PPP2R1AP30153 589 aa10.55□□□□□ -0.72
CKAP2-203ENST00000378037 IQGAP3Q86VI3 1631 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms