RNA–Protein interactions for RNA: ENST00000378011.8

PGAP3-203, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2 BASIC

Gene PGAP3, Length 2,533 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-203ENST00000378011 COL17A1Q9UMD9 1497 aaPredicted RBP23.53■■□□□ 1.36
PGAP3-203ENST00000378011 ANO8Q9HCE9 1232 aaPredicted RBP23.53■■□□□ 1.36
PGAP3-203ENST00000378011 ZMYM4Q5VZL5 1548 aa23.53■■□□□ 1.36
PGAP3-203ENST00000378011 RBM19Q9Y4C8 960 aaKnown RBP23.53■■□□□ 1.36
PGAP3-203ENST00000378011 KIF13AQ9H1H9 1805 aa23.52■■□□□ 1.36
PGAP3-203ENST00000378011 ADGRB3O60242 1522 aa23.51■■□□□ 1.35
PGAP3-203ENST00000378011 HNRNPUQ00839 825 aaKnown RBP eCLIP23.51■■□□□ 1.35
PGAP3-203ENST00000378011 CFAP70Q5T0N1 1121 aa23.51■■□□□ 1.35
PGAP3-203ENST00000378011 FAM9BQ8IZU0 186 aa23.51■■□□□ 1.35
PGAP3-203ENST00000378011 MYOM2P54296 1465 aa23.5■■□□□ 1.35
PGAP3-203ENST00000378011 KIAA1210Q9ULL0 1709 aa23.49■■□□□ 1.35
PGAP3-203ENST00000378011 SCAF11Q99590 1463 aaKnown RBP23.48■■□□□ 1.35
PGAP3-203ENST00000378011 NOS1P29475 1434 aa23.48■■□□□ 1.35
PGAP3-203ENST00000378011 TMF1P82094 1093 aa23.48■■□□□ 1.35
PGAP3-203ENST00000378011 SYNMO15061 1565 aa23.47■■□□□ 1.35
PGAP3-203ENST00000378011 ZC3H13Q5T200 1668 aaKnown RBP23.46■■□□□ 1.35
PGAP3-203ENST00000378011 PPLO60437 1756 aa23.45■■□□□ 1.34
PGAP3-203ENST00000378011 NRXN1Q9ULB1 1477 aa23.42■■□□□ 1.34
PGAP3-203ENST00000378011 ARHGAP31Q2M1Z3 1444 aa23.42■■□□□ 1.34
PGAP3-203ENST00000378011 PIK3C2BO00750 1634 aa23.42■■□□□ 1.34
PGAP3-203ENST00000378011 MSH5O43196 834 aa23.4■■□□□ 1.34
PGAP3-203ENST00000378011 PER1O15534 1290 aaPredicted RBP23.39■■□□□ 1.34
PGAP3-203ENST00000378011 NUTM2DQ5VT03 806 aaPredicted RBP23.39■■□□□ 1.33
PGAP3-203ENST00000378011 IDI1Q13907 227 aa23.38■■□□□ 1.33
PGAP3-203ENST00000378011 PANK3Q9H999 370 aa23.38■■□□□ 1.33
PGAP3-203ENST00000378011 PREX1Q8TCU6 1659 aa23.37■■□□□ 1.33
PGAP3-203ENST00000378011 EIF3AQ14152 1382 aaKnown RBP23.36■■□□□ 1.33
PGAP3-203ENST00000378011 BCANQ96GW7 911 aa23.36■■□□□ 1.33
PGAP3-203ENST00000378011 FBXO31Q5XUX0 539 aaPredicted RBP23.35■■□□□ 1.33
PGAP3-203ENST00000378011 MYO5BQ9ULV0 1848 aa23.35■■□□□ 1.33
PGAP3-203ENST00000378011 PIK3C2GO75747 1445 aa23.35■■□□□ 1.33
PGAP3-203ENST00000378011 RPGRIP1LQ68CZ1 1315 aa23.34■■□□□ 1.33
PGAP3-203ENST00000378011 REREQ9P2R6 1566 aa23.34■■□□□ 1.33
PGAP3-203ENST00000378011 MLECQ14165 292 aa23.33■■□□□ 1.33
PGAP3-203ENST00000378011 RALBP1Q15311 655 aa23.33■■□□□ 1.33
PGAP3-203ENST00000378011 TMC1Q8TDI8 760 aa23.32■■□□□ 1.32
PGAP3-203ENST00000378011 MYBBP1AQ9BQG0 1328 aaKnown RBP23.32■■□□□ 1.32
PGAP3-203ENST00000378011 KTN1Q86UP2 1357 aaKnown RBP23.32■■□□□ 1.32
PGAP3-203ENST00000378011 TMEM132EQ6IEE7 984 aa23.31■■□□□ 1.32
PGAP3-203ENST00000378011 C14orf93Q9H972 538 aaKnown RBP23.31■■□□□ 1.32
PGAP3-203ENST00000378011 AGLP35573 1532 aa23.31■■□□□ 1.32
PGAP3-203ENST00000378011 NEXMIFQ5QGS0 1516 aa23.31■■□□□ 1.32
PGAP3-203ENST00000378011 CC2D1BQ5T0F9 858 aaKnown RBP23.31■■□□□ 1.32
PGAP3-203ENST00000378011 SLC52A1Q9NWF4 448 aa23.3■■□□□ 1.32
PGAP3-203ENST00000378011 PARD3Q8TEW0 1356 aa23.3■■□□□ 1.32
PGAP3-203ENST00000378011 SENP3Q9H4L4 574 aaPredicted RBP23.3■■□□□ 1.32
PGAP3-203ENST00000378011 CLTCQ00610 1675 aaKnown RBP23.3■■□□□ 1.32
PGAP3-203ENST00000378011 SETBP1Q9Y6X0 1596 aa23.29■■□□□ 1.32
PGAP3-203ENST00000378011 TRAK1Q9UPV9 953 aa23.29■■□□□ 1.32
PGAP3-203ENST00000378011 PNISRQ8TF01 805 aaKnown RBP23.28■■□□□ 1.32
PGAP3-203ENST00000378011 CDCA8Q53HL2 280 aa23.28■■□□□ 1.32
PGAP3-203ENST00000378011 ARHGEF40Q8TER5 1519 aa23.27■■□□□ 1.32
PGAP3-203ENST00000378011 ADGRB1O14514 1584 aa23.27■■□□□ 1.32
PGAP3-203ENST00000378011 MYOM1P52179 1685 aa23.27■■□□□ 1.31
PGAP3-203ENST00000378011 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
PGAP3-203ENST00000378011 VGFO15240 615 aaPredicted RBP23.26■■□□□ 1.31
PGAP3-203ENST00000378011 KDM5AP29375 1690 aaKnown RBP23.26■■□□□ 1.31
PGAP3-203ENST00000378011 ERVK-7P63135 1459 aa23.26■■□□□ 1.31
PGAP3-203ENST00000378011 BRD4O60885 1362 aaPredicted RBP23.25■■□□□ 1.31
PGAP3-203ENST00000378011 DEKP35659 375 aaKnown RBP23.25■■□□□ 1.31
PGAP3-203ENST00000378011 MYO3AQ8NEV4 1616 aa23.24■■□□□ 1.31
PGAP3-203ENST00000378011 SENP3-EIF4A1A0A087X0R7 540 aa23.24■■□□□ 1.31
PGAP3-203ENST00000378011 ZBED9Q6R2W3 1325 aa23.24■■□□□ 1.31
PGAP3-203ENST00000378011 CENPJQ9HC77 1338 aaPredicted RBP23.23■■□□□ 1.31
PGAP3-203ENST00000378011 FKBP8Q14318 412 aa23.22■■□□□ 1.31
PGAP3-203ENST00000378011 NLRP13Q86W25 1043 aa23.21■■□□□ 1.31
PGAP3-203ENST00000378011 PPP6R1Q9UPN7 881 aa23.21■■□□□ 1.31
PGAP3-203ENST00000378011 KNSTRNQ9Y448 316 aa23.2■■□□□ 1.3
PGAP3-203ENST00000378011 SALL2Q9Y467 1007 aaPredicted RBP23.2■■□□□ 1.3
PGAP3-203ENST00000378011 QRICH2Q9H0J4 1663 aa23.19■■□□□ 1.3
PGAP3-203ENST00000378011 SBNO2Q9Y2G9 1366 aa23.17■■□□□ 1.3
PGAP3-203ENST00000378011 LRPPRCP42704 1394 aaKnown RBP23.17■■□□□ 1.3
PGAP3-203ENST00000378011 STAG3Q9UJ98 1225 aa23.17■■□□□ 1.3
PGAP3-203ENST00000378011 SLC24A1O60721 1099 aa23.16■■□□□ 1.3
PGAP3-203ENST00000378011 UBE2Q2Q8WVN8 375 aa23.16■■□□□ 1.3
PGAP3-203ENST00000378011 ZFYVE9O95405 1425 aa23.16■■□□□ 1.3
PGAP3-203ENST00000378011 FANCIQ9NVI1 1328 aa23.16■■□□□ 1.3
PGAP3-203ENST00000378011 AMER1Q5JTC6 1135 aaPredicted RBP23.16■■□□□ 1.3
PGAP3-203ENST00000378011 NEFLP07196 543 aa23.14■■□□□ 1.3
PGAP3-203ENST00000378011 SPATA31D1Q6ZQQ2 1576 aa23.14■■□□□ 1.29
PGAP3-203ENST00000378011 ARHGEF28Q8N1W1 1705 aaKnown RBP23.14■■□□□ 1.29
PGAP3-203ENST00000378011 ERICH6BQ5W0A0 696 aa23.12■■□□□ 1.29
PGAP3-203ENST00000378011 ASXL1Q8IXJ9 1541 aa23.12■■□□□ 1.29
PGAP3-203ENST00000378011 STK26Q9P289 416 aa23.12■■□□□ 1.29
PGAP3-203ENST00000378011 ESF1Q9H501 851 aaKnown RBP23.11■■□□□ 1.29
PGAP3-203ENST00000378011 ZMYM3Q14202 1370 aa23.09■■□□□ 1.29
PGAP3-203ENST00000378011 SAFB2Q14151 953 aaKnown RBP eCLIP23.09■■□□□ 1.29
PGAP3-203ENST00000378011 CARD14Q9BXL6 1004 aa23.09■■□□□ 1.29
PGAP3-203ENST00000378011 A2ML1A8K2U0 1454 aa23.08■■□□□ 1.29
PGAP3-203ENST00000378011 PPP2R1AP30153 589 aa23.07■■□□□ 1.28
PGAP3-203ENST00000378011 IRX6P78412 446 aaPredicted RBP23.05■■□□□ 1.28
PGAP3-203ENST00000378011 CCDC136Q96JN2 1154 aa23.05■■□□□ 1.28
PGAP3-203ENST00000378011 SLC12A5Q9H2X9 1139 aa23.05■■□□□ 1.28
PGAP3-203ENST00000378011 ALKQ9UM73 1620 aa23.03■■□□□ 1.28
PGAP3-203ENST00000378011 TULP4Q9NRJ4 1543 aa23.03■■□□□ 1.28
PGAP3-203ENST00000378011 NPC1L1Q9UHC9 1359 aa23.02■■□□□ 1.28
PGAP3-203ENST00000378011 RIMS2Q9UQ26 1411 aa23.01■■□□□ 1.27
PGAP3-203ENST00000378011 YTHDC2Q9H6S0 1430 aaKnown RBP23.01■■□□□ 1.27
PGAP3-203ENST00000378011 EVC2Q86UK5 1308 aa23■■□□□ 1.27
PGAP3-203ENST00000378011 TRHP20396 242 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms