RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 SLFN5Q08AF3 891 aa23.49■■□□□ 1.35
GNE-201ENST00000377902 BRPF3Q9ULD4 1205 aa23.48■■□□□ 1.35
GNE-201ENST00000377902 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.48■■□□□ 1.35
GNE-201ENST00000377902 DAXXQ9UER7 740 aaPredicted RBP23.48■■□□□ 1.35
GNE-201ENST00000377902 APAF1O14727 1248 aa23.47■■□□□ 1.35
GNE-201ENST00000377902 GSE1Q14687 1217 aa23.47■■□□□ 1.35
GNE-201ENST00000377902 DMRT2Q9Y5R5 561 aa23.46■■□□□ 1.35
GNE-201ENST00000377902 MAST1Q9Y2H9 1570 aa23.45■■□□□ 1.34
GNE-201ENST00000377902 FRAT1Q92837 279 aaPredicted RBP23.44■■□□□ 1.34
GNE-201ENST00000377902 RNF17Q9BXT8 1623 aaKnown RBP23.43■■□□□ 1.34
GNE-201ENST00000377902 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.43■■□□□ 1.34
GNE-201ENST00000377902 ATP10AO60312 1499 aa23.43■■□□□ 1.34
GNE-201ENST00000377902 IGHDP01880 384 aa23.41■■□□□ 1.34
GNE-201ENST00000377902 DUOX2Q9NRD8 1548 aa23.4■■□□□ 1.34
GNE-201ENST00000377902 TRMT2AQ8IZ69 625 aaKnown RBP23.4■■□□□ 1.34
GNE-201ENST00000377902 PLXNC1O60486 1568 aa23.4■■□□□ 1.34
GNE-201ENST00000377902 FRAT2O75474 233 aaPredicted RBP23.4■■□□□ 1.34
GNE-201ENST00000377902 MADDQ8WXG6 1647 aa23.38■■□□□ 1.33
GNE-201ENST00000377902 ASXL1Q8IXJ9 1541 aa23.38■■□□□ 1.33
GNE-201ENST00000377902 IQGAP1P46940 1657 aa23.36■■□□□ 1.33
GNE-201ENST00000377902 PIK3C2GO75747 1445 aa23.35■■□□□ 1.33
GNE-201ENST00000377902 CDCA8Q53HL2 280 aa23.35■■□□□ 1.33
GNE-201ENST00000377902 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.35■■□□□ 1.33
GNE-201ENST00000377902 SCAF11Q99590 1463 aaKnown RBP23.34■■□□□ 1.33
GNE-201ENST00000377902 TRAPPC8Q9Y2L5 1435 aa23.34■■□□□ 1.33
GNE-201ENST00000377902 NKTRP30414 1462 aaKnown RBP23.34■■□□□ 1.33
GNE-201ENST00000377902 SYNMO15061 1565 aa23.33■■□□□ 1.33
GNE-201ENST00000377902 SEC24BO95487 1268 aa23.33■■□□□ 1.33
GNE-201ENST00000377902 AFAP1Q8N556 730 aa23.33■■□□□ 1.33
GNE-201ENST00000377902 CARD14Q9BXL6 1004 aa23.33■■□□□ 1.32
GNE-201ENST00000377902 PANK1Q8TE04 598 aa23.32■■□□□ 1.32
GNE-201ENST00000377902 MYOM1P52179 1685 aa23.31■■□□□ 1.32
GNE-201ENST00000377902 CFAP70Q5T0N1 1121 aa23.31■■□□□ 1.32
GNE-201ENST00000377902 COG6Q9Y2V7 657 aa23.31■■□□□ 1.32
GNE-201ENST00000377902 ERCC6L2Q5T890 1561 aa23.3■■□□□ 1.32
GNE-201ENST00000377902 CLASP1Q7Z460 1538 aa23.29■■□□□ 1.32
GNE-201ENST00000377902 EIF3AQ14152 1382 aaKnown RBP23.29■■□□□ 1.32
GNE-201ENST00000377902 E9PSI1 815 aa23.29■■□□□ 1.32
GNE-201ENST00000377902 NEUROD2Q15784 382 aa23.29■■□□□ 1.32
GNE-201ENST00000377902 USP19O94966 1318 aa23.29■■□□□ 1.32
GNE-201ENST00000377902 EFCAB2Q5VUJ9 269 aa23.28■■□□□ 1.32
GNE-201ENST00000377902 TNNT2P45379 298 aaPredicted RBP23.27■■□□□ 1.32
GNE-201ENST00000377902 RRP7AQ9Y3A4 280 aaKnown RBP23.26■■□□□ 1.31
GNE-201ENST00000377902 CLTCL1P53675 1640 aa23.26■■□□□ 1.31
GNE-201ENST00000377902 PLCH2O75038 1416 aa23.25■■□□□ 1.31
GNE-201ENST00000377902 CANXP27824 592 aaKnown RBP23.25■■□□□ 1.31
GNE-201ENST00000377902 SPHKAPQ2M3C7 1700 aa23.25■■□□□ 1.31
GNE-201ENST00000377902 SPAG9O60271 1321 aaKnown RBP23.25■■□□□ 1.31
GNE-201ENST00000377902 SCAPERQ9BY12 1400 aa23.25■■□□□ 1.31
GNE-201ENST00000377902 WWC1Q8IX03 1113 aa23.24■■□□□ 1.31
GNE-201ENST00000377902 TNNQ9UQP3 1299 aa23.24■■□□□ 1.31
GNE-201ENST00000377902 ABCC2Q92887 1545 aa23.24■■□□□ 1.31
GNE-201ENST00000377902 NPC1L1Q9UHC9 1359 aa23.23■■□□□ 1.31
GNE-201ENST00000377902 ADGRF5Q8IZF2 1346 aa23.23■■□□□ 1.31
GNE-201ENST00000377902 CENPJQ9HC77 1338 aaPredicted RBP23.23■■□□□ 1.31
GNE-201ENST00000377902 TRPM2O94759 1503 aa23.22■■□□□ 1.31
GNE-201ENST00000377902 CLUAP1Q96AJ1 413 aa23.22■■□□□ 1.31
GNE-201ENST00000377902 BCL2L13Q9BXK5 485 aa23.2■■□□□ 1.3
GNE-201ENST00000377902 ERVK-7P63135 1459 aa23.2■■□□□ 1.3
GNE-201ENST00000377902 CEP152O94986 1710 aa23.2■■□□□ 1.3
GNE-201ENST00000377902 SLKQ9H2G2 1235 aaPredicted RBP23.19■■□□□ 1.3
GNE-201ENST00000377902 PTPRTO14522 1441 aa23.19■■□□□ 1.3
GNE-201ENST00000377902 KDM5AP29375 1690 aaKnown RBP23.19■■□□□ 1.3
GNE-201ENST00000377902 CGNL1Q0VF96 1302 aa23.18■■□□□ 1.3
GNE-201ENST00000377902 UGGT1Q9NYU2 1555 aa23.18■■□□□ 1.3
GNE-201ENST00000377902 PDE3AQ14432 1141 aa23.18■■□□□ 1.3
GNE-201ENST00000377902 ABCC1P33527 1531 aa23.18■■□□□ 1.3
GNE-201ENST00000377902 CHD1O14646 1710 aa23.17■■□□□ 1.3
GNE-201ENST00000377902 PRKCSHP14314 528 aaPredicted RBP23.17■■□□□ 1.3
GNE-201ENST00000377902 RLBP1P12271 317 aa23.17■■□□□ 1.3
GNE-201ENST00000377902 KIF3BO15066 747 aa23.16■■□□□ 1.3
GNE-201ENST00000377902 PCDHB15Q9Y5E8 787 aa23.16■■□□□ 1.3
GNE-201ENST00000377902 POGKQ9P215 609 aa23.15■■□□□ 1.3
GNE-201ENST00000377902 RARSP54136 660 aaKnown RBP23.13■■□□□ 1.29
GNE-201ENST00000377902 STAC3Q96MF2 364 aa23.12■■□□□ 1.29
GNE-201ENST00000377902 SLC12A5Q9H2X9 1139 aa23.12■■□□□ 1.29
GNE-201ENST00000377902 TCP11L2Q8N4U5 519 aa23.11■■□□□ 1.29
GNE-201ENST00000377902 MAPK8IP3Q9UPT6 1336 aa23.1■■□□□ 1.29
GNE-201ENST00000377902 MORC1Q86VD1 984 aa23.1■■□□□ 1.29
GNE-201ENST00000377902 VIRMAQ69YN4 1812 aaKnown RBP23.09■■□□□ 1.29
GNE-201ENST00000377902 ZFYVE16Q7Z3T8 1539 aa23.09■■□□□ 1.29
GNE-201ENST00000377902 TRAK1Q9UPV9 953 aa23.09■■□□□ 1.29
GNE-201ENST00000377902 ZCCHC11Q5TAX3 1644 aaKnown RBP23.09■■□□□ 1.29
GNE-201ENST00000377902 POLR3AO14802 1390 aaPredicted RBP23.09■■□□□ 1.29
GNE-201ENST00000377902 SHROOM2Q13796 1616 aa23.08■■□□□ 1.29
GNE-201ENST00000377902 NLRP1Q9C000 1473 aa23.08■■□□□ 1.29
GNE-201ENST00000377902 ABCA6Q8N139 1617 aa23.08■■□□□ 1.29
GNE-201ENST00000377902 PDZRN3Q9UPQ7 1066 aa23.07■■□□□ 1.28
GNE-201ENST00000377902 NSD3Q9BZ95 1437 aa23.07■■□□□ 1.28
GNE-201ENST00000377902 CHGAP10645 457 aaKnown RBP23.07■■□□□ 1.28
GNE-201ENST00000377902 SPRYD3Q8NCJ5 442 aa23.06■■□□□ 1.28
GNE-201ENST00000377902 RUNDC1Q96C34 613 aa23.06■■□□□ 1.28
GNE-201ENST00000377902 KANK1Q14678 1352 aa23.05■■□□□ 1.28
GNE-201ENST00000377902 TET3O43151 1660 aa23.05■■□□□ 1.28
GNE-201ENST00000377902 MAP3K4Q9Y6R4 1608 aa23.05■■□□□ 1.28
GNE-201ENST00000377902 BECN1Q14457 450 aa23.04■■□□□ 1.28
GNE-201ENST00000377902 NGEFQ8N5V2 710 aa23.04■■□□□ 1.28
GNE-201ENST00000377902 MTHFSP49914 203 aa23.04■■□□□ 1.28
GNE-201ENST00000377902 RTEL1-TNFRSF6BF6WH68 1400 aa23.04■■□□□ 1.28
GNE-201ENST00000377902 TMEM132EQ6IEE7 984 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms