RNA–Protein interactions for RNA: ENST00000377067.8

GPC5-201, Transcript of glypican 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC5, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-201ENST00000377067 GPATCH8Q9UKJ3 1502 aaKnown RBP24.35■■□□□ 1.49
GPC5-201ENST00000377067 KNSTRNQ9Y448 316 aa24.35■■□□□ 1.49
GPC5-201ENST00000377067 TRPM1Q7Z4N2 1603 aa24.34■■□□□ 1.49
GPC5-201ENST00000377067 PLEKHG5O94827 1062 aa24.32■■□□□ 1.48
GPC5-201ENST00000377067 CHMP5Q9NZZ3 219 aa24.3■■□□□ 1.48
GPC5-201ENST00000377067 TROQ12816 1431 aaPredicted RBP24.3■■□□□ 1.48
GPC5-201ENST00000377067 PDZRN3Q9UPQ7 1066 aa24.29■■□□□ 1.48
GPC5-201ENST00000377067 PDE3AQ14432 1141 aa24.29■■□□□ 1.48
GPC5-201ENST00000377067 MAGI2Q86UL8 1455 aa24.28■■□□□ 1.48
GPC5-201ENST00000377067 TRIM44Q96DX7 344 aaPredicted RBP24.28■■□□□ 1.48
GPC5-201ENST00000377067 GPRASP1Q5JY77 1395 aa24.28■■□□□ 1.48
GPC5-201ENST00000377067 E9PSI1 815 aa24.27■■□□□ 1.48
GPC5-201ENST00000377067 PCDHB15Q9Y5E8 787 aa24.27■■□□□ 1.48
GPC5-201ENST00000377067 CROCC2H7BZ55 1655 aa24.27■■□□□ 1.48
GPC5-201ENST00000377067 AMER1Q5JTC6 1135 aaPredicted RBP24.27■■□□□ 1.48
GPC5-201ENST00000377067 CENPJQ9HC77 1338 aaPredicted RBP24.27■■□□□ 1.48
GPC5-201ENST00000377067 TNNQ9UQP3 1299 aa24.27■■□□□ 1.48
GPC5-201ENST00000377067 C9orf84Q5VXU9 1444 aa24.27■■□□□ 1.48
GPC5-201ENST00000377067 CCDC144AA2RUR9 1427 aa24.26■■□□□ 1.47
GPC5-201ENST00000377067 MFAP1P55081 439 aaKnown RBP24.24■■□□□ 1.47
GPC5-201ENST00000377067 PDS5BQ9NTI5 1447 aa24.24■■□□□ 1.47
GPC5-201ENST00000377067 TSPY4P0CV99 314 aa24.23■■□□□ 1.47
GPC5-201ENST00000377067 TSPY10P0CW01 314 aa24.23■■□□□ 1.47
GPC5-201ENST00000377067 GAS2L3Q86XJ1 694 aa24.23■■□□□ 1.47
GPC5-201ENST00000377067 PODXL2Q9NZ53 605 aa24.23■■□□□ 1.47
GPC5-201ENST00000377067 A2MP01023 1474 aa24.22■■□□□ 1.47
GPC5-201ENST00000377067 PRDM15P57071 1507 aaPredicted RBP24.21■■□□□ 1.47
GPC5-201ENST00000377067 C22orf23Q9BZE7 217 aa24.21■■□□□ 1.47
GPC5-201ENST00000377067 ITSN2Q9NZM3 1697 aa24.21■■□□□ 1.47
GPC5-201ENST00000377067 CLASP1Q7Z460 1538 aa24.21■■□□□ 1.47
GPC5-201ENST00000377067 PMFBP1Q8TBY8 1022 aa24.21■■□□□ 1.47
GPC5-201ENST00000377067 RAPGEF6Q8TEU7 1601 aa24.2■■□□□ 1.47
GPC5-201ENST00000377067 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.46
GPC5-201ENST00000377067 RLBP1P12271 317 aa24.2■■□□□ 1.46
GPC5-201ENST00000377067 TPM2P07951 284 aa24.2■■□□□ 1.46
GPC5-201ENST00000377067 BCL2L13Q9BXK5 485 aa24.19■■□□□ 1.46
GPC5-201ENST00000377067 WDR7Q9Y4E6 1490 aa24.19■■□□□ 1.46
GPC5-201ENST00000377067 DDX11L8A8MPP1 907 aa24.19■■□□□ 1.46
GPC5-201ENST00000377067 PTPRGP23470 1445 aa24.18■■□□□ 1.46
GPC5-201ENST00000377067 KIAA1211Q6ZU35 1233 aa24.18■■□□□ 1.46
GPC5-201ENST00000377067 HNRNPMP52272 730 aaKnown RBP eCLIP24.18■■□□□ 1.469e-11■■■■■ 36.6
GPC5-201ENST00000377067 PDCL3Q9H2J4 239 aa24.18■■□□□ 1.46
GPC5-201ENST00000377067 DISP1Q96F81 1524 aa24.18■■□□□ 1.46
GPC5-201ENST00000377067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.17■■□□□ 1.46
GPC5-201ENST00000377067 ZNF692Q9BU19 519 aaPredicted RBP24.16■■□□□ 1.46
GPC5-201ENST00000377067 NEUROD2Q15784 382 aa24.15■■□□□ 1.46
GPC5-201ENST00000377067 KIAA0556O60303 1618 aa24.15■■□□□ 1.46
GPC5-201ENST00000377067 HSCBQ8IWL3 235 aa24.15■■□□□ 1.46
GPC5-201ENST00000377067 RBM10P98175 930 aaKnown RBP24.14■■□□□ 1.45
GPC5-201ENST00000377067 RTEL1-TNFRSF6BF6WH68 1400 aa24.13■■□□□ 1.45
GPC5-201ENST00000377067 FAM135AQ9P2D6 1515 aa24.13■■□□□ 1.45
GPC5-201ENST00000377067 PIK3C2GO75747 1445 aa24.12■■□□□ 1.45
GPC5-201ENST00000377067 NINLQ9Y2I6 1382 aa24.12■■□□□ 1.45
GPC5-201ENST00000377067 WWC1Q8IX03 1113 aa24.11■■□□□ 1.45
GPC5-201ENST00000377067 ISY1Q9ULR0 285 aaKnown RBP24.11■■□□□ 1.45
GPC5-201ENST00000377067 TNPO1Q92973 898 aaKnown RBP24.11■■□□□ 1.45
GPC5-201ENST00000377067 PLA2R1Q13018 1463 aa24.11■■□□□ 1.45
GPC5-201ENST00000377067 PLB1Q6P1J6 1458 aa24.11■■□□□ 1.45
GPC5-201ENST00000377067 ADAMTS12P58397 1594 aa24.11■■□□□ 1.45
GPC5-201ENST00000377067 RARSP54136 660 aaKnown RBP24.1■■□□□ 1.45
GPC5-201ENST00000377067 RWDD1Q9H446 243 aaPredicted RBP24.1■■□□□ 1.45
GPC5-201ENST00000377067 RRP7AQ9Y3A4 280 aaKnown RBP24.1■■□□□ 1.45
GPC5-201ENST00000377067 TARBP1Q13395 1621 aaKnown RBP24.09■■□□□ 1.45
GPC5-201ENST00000377067 PBRM1Q86U86 1689 aa24.09■■□□□ 1.45
GPC5-201ENST00000377067 CDC42BPAQ5VT25 1732 aa24.08■■□□□ 1.45
GPC5-201ENST00000377067 ABCC2Q92887 1545 aa24.08■■□□□ 1.45
GPC5-201ENST00000377067 SHANK2Q9UPX8 1470 aa24.08■■□□□ 1.44
GPC5-201ENST00000377067 ADCY10Q96PN6 1610 aa24.07■■□□□ 1.44
GPC5-201ENST00000377067 ABCC10Q5T3U5 1492 aa24.07■■□□□ 1.44
GPC5-201ENST00000377067 ASXL1Q8IXJ9 1541 aa24.07■■□□□ 1.44
GPC5-201ENST00000377067 LAMC1P11047 1609 aa24.06■■□□□ 1.44
GPC5-201ENST00000377067 FOXD4L1Q9NU39 408 aa24.06■■□□□ 1.44
GPC5-201ENST00000377067 ZMYM3Q14202 1370 aa24.05■■□□□ 1.44
GPC5-201ENST00000377067 RIPK4P57078 832 aa24.04■■□□□ 1.44
GPC5-201ENST00000377067 DDIT3P35638 169 aa24.03■■□□□ 1.44
GPC5-201ENST00000377067 CALD1Q05682 793 aaKnown RBP24.03■■□□□ 1.44
GPC5-201ENST00000377067 FAM13BQ9NYF5 915 aa24.02■■□□□ 1.44
GPC5-201ENST00000377067 ZSCAN30Q86W11 494 aa24.01■■□□□ 1.43
GPC5-201ENST00000377067 PRDM4Q9UKN5 801 aa24.01■■□□□ 1.43
GPC5-201ENST00000377067 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
GPC5-201ENST00000377067 GBP4Q96PP9 640 aa24.01■■□□□ 1.43
GPC5-201ENST00000377067 ARID3AQ99856 593 aa24.01■■□□□ 1.43
GPC5-201ENST00000377067 PLEKHD1A6NEE1 506 aa24■■□□□ 1.43
GPC5-201ENST00000377067 OFD1O75665 1012 aa24■■□□□ 1.43
GPC5-201ENST00000377067 HSP90AB1P08238 724 aaKnown RBP24■■□□□ 1.43
GPC5-201ENST00000377067 NASPP49321 788 aaPredicted RBP24■■□□□ 1.43
GPC5-201ENST00000377067 CCDC173Q0VFZ6 552 aa24■■□□□ 1.43
GPC5-201ENST00000377067 CCDC141Q6ZP82 1450 aa23.99■■□□□ 1.43
GPC5-201ENST00000377067 R3HCC1Q9Y3T6 440 aaKnown RBP23.98■■□□□ 1.43
GPC5-201ENST00000377067 EIF2AK4Q9P2K8 1649 aaKnown RBP23.98■■□□□ 1.43
GPC5-201ENST00000377067 MSNP26038 577 aaKnown RBP23.97■■□□□ 1.43
GPC5-201ENST00000377067 AAMPQ13685 434 aa23.97■■□□□ 1.43
GPC5-201ENST00000377067 NCOA3Q9Y6Q9 1424 aa23.97■■□□□ 1.43
GPC5-201ENST00000377067 CDCA8Q53HL2 280 aa23.97■■□□□ 1.43
GPC5-201ENST00000377067 PLXNC1O60486 1568 aa23.96■■□□□ 1.43
GPC5-201ENST00000377067 RAB3GAP1Q15042 981 aa23.96■■□□□ 1.43
GPC5-201ENST00000377067 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
GPC5-201ENST00000377067 PPP1R9BQ96SB3 815 aa23.96■■□□□ 1.43
GPC5-201ENST00000377067 MVPQ14764 893 aaKnown RBP23.95■■□□□ 1.43
GPC5-201ENST00000377067 SKOR2Q2VWA4 1001 aaPredicted RBP23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms