RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 ADCY10Q96PN6 1610 aa28.26■■■□□ 2.12
SYNDIG1-201ENST00000376862 TRMT2AQ8IZ69 625 aaKnown RBP28.26■■■□□ 2.11
SYNDIG1-201ENST00000376862 TMF1P82094 1093 aa28.26■■■□□ 2.11
SYNDIG1-201ENST00000376862 CLASP1Q7Z460 1538 aa28.26■■■□□ 2.11
SYNDIG1-201ENST00000376862 CLCN1P35523 988 aa28.25■■■□□ 2.11
SYNDIG1-201ENST00000376862 CCDC146Q8IYE0 955 aa28.25■■■□□ 2.11
SYNDIG1-201ENST00000376862 MAPK8IP3Q9UPT6 1336 aa28.25■■■□□ 2.11
SYNDIG1-201ENST00000376862 FSD2A1L4K1 749 aa28.24■■■□□ 2.11
SYNDIG1-201ENST00000376862 LAMC1P11047 1609 aa28.24■■■□□ 2.11
SYNDIG1-201ENST00000376862 NKTRP30414 1462 aaKnown RBP28.24■■■□□ 2.11
SYNDIG1-201ENST00000376862 SHANK2Q9UPX8 1470 aa28.23■■■□□ 2.11
SYNDIG1-201ENST00000376862 GZF1Q9H116 711 aaPredicted RBP28.23■■■□□ 2.11
SYNDIG1-201ENST00000376862 CCDC144AA2RUR9 1427 aa28.22■■■□□ 2.11
SYNDIG1-201ENST00000376862 ZMYND15Q9H091 742 aa28.22■■■□□ 2.11
SYNDIG1-201ENST00000376862 PLEKHD1A6NEE1 506 aa28.22■■■□□ 2.11
SYNDIG1-201ENST00000376862 TBC1D2Q9BYX2 928 aa28.21■■■□□ 2.11
SYNDIG1-201ENST00000376862 A2MP01023 1474 aa28.21■■■□□ 2.11
SYNDIG1-201ENST00000376862 MAGI2Q86UL8 1455 aa28.21■■■□□ 2.11
SYNDIG1-201ENST00000376862 HSP90AA2PQ14568 343 aaPredicted RBP28.21■■■□□ 2.11
SYNDIG1-201ENST00000376862 ABCA8O94911 1581 aa28.2■■■□□ 2.11
SYNDIG1-201ENST00000376862 HSP90AA1P07900 732 aaKnown RBP28.2■■■□□ 2.1
SYNDIG1-201ENST00000376862 FAM135AQ9P2D6 1515 aa28.19■■■□□ 2.1
SYNDIG1-201ENST00000376862 KNSTRNQ9Y448 316 aa28.18■■■□□ 2.1
SYNDIG1-201ENST00000376862 ATP10BO94823 1461 aa28.18■■■□□ 2.1
SYNDIG1-201ENST00000376862 SPRYD3Q8NCJ5 442 aa28.18■■■□□ 2.1
SYNDIG1-201ENST00000376862 CLUAP1Q96AJ1 413 aa28.17■■■□□ 2.1
SYNDIG1-201ENST00000376862 TSPY4P0CV99 314 aa28.17■■■□□ 2.1
SYNDIG1-201ENST00000376862 TSPY10P0CW01 314 aa28.17■■■□□ 2.1
SYNDIG1-201ENST00000376862 CGNL1Q0VF96 1302 aa28.16■■■□□ 2.1
SYNDIG1-201ENST00000376862 TBC1D32Q96NH3 1257 aa28.16■■■□□ 2.1
SYNDIG1-201ENST00000376862 MCM4P33991 863 aa28.16■■■□□ 2.1
SYNDIG1-201ENST00000376862 APAF1O14727 1248 aa28.15■■■□□ 2.1
SYNDIG1-201ENST00000376862 COG6Q9Y2V7 657 aa28.15■■■□□ 2.1
SYNDIG1-201ENST00000376862 WDR7Q9Y4E6 1490 aa28.15■■■□□ 2.1
SYNDIG1-201ENST00000376862 RRP9O43818 475 aaKnown RBP28.15■■■□□ 2.1
SYNDIG1-201ENST00000376862 PANK1Q8TE04 598 aa28.15■■■□□ 2.1
SYNDIG1-201ENST00000376862 MYO5CQ9NQX4 1742 aa28.14■■■□□ 2.1
SYNDIG1-201ENST00000376862 AMER1Q5JTC6 1135 aaPredicted RBP28.14■■■□□ 2.09
SYNDIG1-201ENST00000376862 UPF2Q9HAU5 1272 aaKnown RBP28.13■■■□□ 2.09
SYNDIG1-201ENST00000376862 DMRT2Q9Y5R5 561 aa28.13■■■□□ 2.09
SYNDIG1-201ENST00000376862 ABCC10Q5T3U5 1492 aa28.12■■■□□ 2.09
SYNDIG1-201ENST00000376862 PDE3AQ14432 1141 aa28.11■■■□□ 2.09
SYNDIG1-201ENST00000376862 PLA2R1Q13018 1463 aa28.1■■■□□ 2.09
SYNDIG1-201ENST00000376862 E9PSI1 815 aa28.1■■■□□ 2.09
SYNDIG1-201ENST00000376862 CANXP27824 592 aaKnown RBP28.09■■■□□ 2.09
SYNDIG1-201ENST00000376862 CHD1O14646 1710 aa28.09■■■□□ 2.09
SYNDIG1-201ENST00000376862 HNRNPMP52272 730 aaKnown RBP eCLIP28.09■■■□□ 2.09
SYNDIG1-201ENST00000376862 EIF2AK4Q9P2K8 1649 aaKnown RBP28.08■■■□□ 2.09
SYNDIG1-201ENST00000376862 TRAK2O60296 914 aa28.07■■■□□ 2.08
SYNDIG1-201ENST00000376862 PIK3C2GO75747 1445 aa28.07■■■□□ 2.08
SYNDIG1-201ENST00000376862 ABCC2Q92887 1545 aa28.06■■■□□ 2.08
SYNDIG1-201ENST00000376862 CENPJQ9HC77 1338 aaPredicted RBP28.05■■■□□ 2.08
SYNDIG1-201ENST00000376862 MRE11P49959 708 aa28.05■■■□□ 2.08
SYNDIG1-201ENST00000376862 CCDC141Q6ZP82 1450 aa28.03■■■□□ 2.08
SYNDIG1-201ENST00000376862 NINLQ9Y2I6 1382 aa28.02■■■□□ 2.08
SYNDIG1-201ENST00000376862 ASXL1Q8IXJ9 1541 aa28.02■■■□□ 2.08
SYNDIG1-201ENST00000376862 PDZRN3Q9UPQ7 1066 aa28.01■■■□□ 2.08
SYNDIG1-201ENST00000376862 ERBB4Q15303 1308 aa28.01■■■□□ 2.07
SYNDIG1-201ENST00000376862 PCDHB15Q9Y5E8 787 aa28■■■□□ 2.07
SYNDIG1-201ENST00000376862 GRPEL1Q9HAV7 217 aa28■■■□□ 2.07
SYNDIG1-201ENST00000376862 CHMP5Q9NZZ3 219 aa28■■■□□ 2.07
SYNDIG1-201ENST00000376862 RNF17Q9BXT8 1623 aaKnown RBP27.99■■■□□ 2.07
SYNDIG1-201ENST00000376862 ESPNB1AK53 854 aa27.99■■■□□ 2.07
SYNDIG1-201ENST00000376862 PMFBP1Q8TBY8 1022 aa27.99■■■□□ 2.07
SYNDIG1-201ENST00000376862 MYH16Q9H6N6 1097 aa27.98■■■□□ 2.07
SYNDIG1-201ENST00000376862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.97■■■□□ 2.07
SYNDIG1-201ENST00000376862 PLXNC1O60486 1568 aa27.97■■■□□ 2.07
SYNDIG1-201ENST00000376862 SYNMO15061 1565 aa27.97■■■□□ 2.07
SYNDIG1-201ENST00000376862 ARHGEF5Q12774 1597 aa27.96■■■□□ 2.07
SYNDIG1-201ENST00000376862 TNNQ9UQP3 1299 aa27.95■■■□□ 2.07
SYNDIG1-201ENST00000376862 ZMYM3Q14202 1370 aa27.94■■■□□ 2.06
SYNDIG1-201ENST00000376862 RTEL1-TNFRSF6BF6WH68 1400 aa27.93■■■□□ 2.06
SYNDIG1-201ENST00000376862 RLBP1P12271 317 aa27.92■■■□□ 2.06
SYNDIG1-201ENST00000376862 C22orf23Q9BZE7 217 aa27.9■■■□□ 2.06
SYNDIG1-201ENST00000376862 MYOM1P52179 1685 aa27.9■■■□□ 2.06
SYNDIG1-201ENST00000376862 WWC1Q8IX03 1113 aa27.89■■■□□ 2.06
SYNDIG1-201ENST00000376862 IQGAP1P46940 1657 aa27.89■■■□□ 2.06
SYNDIG1-201ENST00000376862 UNC13BO14795 1591 aa27.89■■■□□ 2.06
SYNDIG1-201ENST00000376862 ERCC6L2Q5T890 1561 aa27.89■■■□□ 2.06
SYNDIG1-201ENST00000376862 MFAP1P55081 439 aaKnown RBP27.88■■■□□ 2.05
SYNDIG1-201ENST00000376862 DDX11L8A8MPP1 907 aa27.87■■■□□ 2.05
SYNDIG1-201ENST00000376862 RARSP54136 660 aaKnown RBP27.87■■■□□ 2.05
SYNDIG1-201ENST00000376862 NPC1L1Q9UHC9 1359 aa27.86■■■□□ 2.05
SYNDIG1-201ENST00000376862 ZNF692Q9BU19 519 aaPredicted RBP27.86■■■□□ 2.05
SYNDIG1-201ENST00000376862 SHROOM2Q13796 1616 aa27.86■■■□□ 2.05
SYNDIG1-201ENST00000376862 TRIM44Q96DX7 344 aaPredicted RBP27.85■■■□□ 2.05
SYNDIG1-201ENST00000376862 CDCA8Q53HL2 280 aa27.85■■■□□ 2.05
SYNDIG1-201ENST00000376862 RWDD1Q9H446 243 aaPredicted RBP27.85■■■□□ 2.05
SYNDIG1-201ENST00000376862 BCL2L13Q9BXK5 485 aa27.84■■■□□ 2.05
SYNDIG1-201ENST00000376862 CDC42BPBQ9Y5S2 1711 aa27.84■■■□□ 2.05
SYNDIG1-201ENST00000376862 GAS2L3Q86XJ1 694 aa27.83■■■□□ 2.05
SYNDIG1-201ENST00000376862 NGEFQ8N5V2 710 aa27.83■■■□□ 2.05
SYNDIG1-201ENST00000376862 SAMD9LQ8IVG5 1584 aa27.83■■■□□ 2.05
SYNDIG1-201ENST00000376862 AAMPQ13685 434 aa27.83■■■□□ 2.05
SYNDIG1-201ENST00000376862 ISY1Q9ULR0 285 aaKnown RBP27.83■■■□□ 2.05
SYNDIG1-201ENST00000376862 NEUROD2Q15784 382 aa27.81■■■□□ 2.04
SYNDIG1-201ENST00000376862 HSCBQ8IWL3 235 aa27.81■■■□□ 2.04
SYNDIG1-201ENST00000376862 IQGAP3Q86VI3 1631 aa27.8■■■□□ 2.04
SYNDIG1-201ENST00000376862 TPM2P07951 284 aa27.8■■■□□ 2.04
SYNDIG1-201ENST00000376862 PREX2Q70Z35 1606 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms