RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 ADCY10Q96PN6 1610 aa28.26■■■□□ 2.12
SYNDIG1-201ENST00000376862 TRMT2AQ8IZ69 625 aaKnown RBP28.26■■■□□ 2.11
SYNDIG1-201ENST00000376862 TMF1P82094 1093 aa28.26■■■□□ 2.11
SYNDIG1-201ENST00000376862 CLASP1Q7Z460 1538 aa28.26■■■□□ 2.11
SYNDIG1-201ENST00000376862 CLCN1P35523 988 aa28.25■■■□□ 2.11
SYNDIG1-201ENST00000376862 CCDC146Q8IYE0 955 aa28.25■■■□□ 2.11
SYNDIG1-201ENST00000376862 MAPK8IP3Q9UPT6 1336 aa28.25■■■□□ 2.11
SYNDIG1-201ENST00000376862 FSD2A1L4K1 749 aa28.24■■■□□ 2.11
SYNDIG1-201ENST00000376862 LAMC1P11047 1609 aa28.24■■■□□ 2.11
SYNDIG1-201ENST00000376862 NKTRP30414 1462 aaKnown RBP28.24■■■□□ 2.11
SYNDIG1-201ENST00000376862 SHANK2Q9UPX8 1470 aa28.23■■■□□ 2.11
SYNDIG1-201ENST00000376862 GZF1Q9H116 711 aaPredicted RBP28.23■■■□□ 2.11
SYNDIG1-201ENST00000376862 CCDC144AA2RUR9 1427 aa28.22■■■□□ 2.11
SYNDIG1-201ENST00000376862 ZMYND15Q9H091 742 aa28.22■■■□□ 2.11
SYNDIG1-201ENST00000376862 PLEKHD1A6NEE1 506 aa28.22■■■□□ 2.11
SYNDIG1-201ENST00000376862 TBC1D2Q9BYX2 928 aa28.21■■■□□ 2.11
SYNDIG1-201ENST00000376862 A2MP01023 1474 aa28.21■■■□□ 2.11
SYNDIG1-201ENST00000376862 MAGI2Q86UL8 1455 aa28.21■■■□□ 2.11
SYNDIG1-201ENST00000376862 HSP90AA2PQ14568 343 aaPredicted RBP28.21■■■□□ 2.11
SYNDIG1-201ENST00000376862 ABCA8O94911 1581 aa28.2■■■□□ 2.11
SYNDIG1-201ENST00000376862 HSP90AA1P07900 732 aaKnown RBP28.2■■■□□ 2.1
SYNDIG1-201ENST00000376862 FAM135AQ9P2D6 1515 aa28.19■■■□□ 2.1
SYNDIG1-201ENST00000376862 KNSTRNQ9Y448 316 aa28.18■■■□□ 2.1
SYNDIG1-201ENST00000376862 ATP10BO94823 1461 aa28.18■■■□□ 2.1
SYNDIG1-201ENST00000376862 SPRYD3Q8NCJ5 442 aa28.18■■■□□ 2.1
SYNDIG1-201ENST00000376862 CLUAP1Q96AJ1 413 aa28.17■■■□□ 2.1
SYNDIG1-201ENST00000376862 TSPY4P0CV99 314 aa28.17■■■□□ 2.1
SYNDIG1-201ENST00000376862 TSPY10P0CW01 314 aa28.17■■■□□ 2.1
SYNDIG1-201ENST00000376862 CGNL1Q0VF96 1302 aa28.16■■■□□ 2.1
SYNDIG1-201ENST00000376862 TBC1D32Q96NH3 1257 aa28.16■■■□□ 2.1
SYNDIG1-201ENST00000376862 MCM4P33991 863 aa28.16■■■□□ 2.1
SYNDIG1-201ENST00000376862 APAF1O14727 1248 aa28.15■■■□□ 2.1
SYNDIG1-201ENST00000376862 COG6Q9Y2V7 657 aa28.15■■■□□ 2.1
SYNDIG1-201ENST00000376862 WDR7Q9Y4E6 1490 aa28.15■■■□□ 2.1
SYNDIG1-201ENST00000376862 RRP9O43818 475 aaKnown RBP28.15■■■□□ 2.1
SYNDIG1-201ENST00000376862 PANK1Q8TE04 598 aa28.15■■■□□ 2.1
SYNDIG1-201ENST00000376862 MYO5CQ9NQX4 1742 aa28.14■■■□□ 2.1
SYNDIG1-201ENST00000376862 AMER1Q5JTC6 1135 aaPredicted RBP28.14■■■□□ 2.09
SYNDIG1-201ENST00000376862 UPF2Q9HAU5 1272 aaKnown RBP28.13■■■□□ 2.09
SYNDIG1-201ENST00000376862 DMRT2Q9Y5R5 561 aa28.13■■■□□ 2.09
SYNDIG1-201ENST00000376862 ABCC10Q5T3U5 1492 aa28.12■■■□□ 2.09
SYNDIG1-201ENST00000376862 PDE3AQ14432 1141 aa28.11■■■□□ 2.09
SYNDIG1-201ENST00000376862 PLA2R1Q13018 1463 aa28.1■■■□□ 2.09
SYNDIG1-201ENST00000376862 E9PSI1 815 aa28.1■■■□□ 2.09
SYNDIG1-201ENST00000376862 CANXP27824 592 aaKnown RBP28.09■■■□□ 2.09
SYNDIG1-201ENST00000376862 CHD1O14646 1710 aa28.09■■■□□ 2.09
SYNDIG1-201ENST00000376862 HNRNPMP52272 730 aaKnown RBP eCLIP28.09■■■□□ 2.09
SYNDIG1-201ENST00000376862 EIF2AK4Q9P2K8 1649 aaKnown RBP28.08■■■□□ 2.09
SYNDIG1-201ENST00000376862 TRAK2O60296 914 aa28.07■■■□□ 2.08
SYNDIG1-201ENST00000376862 PIK3C2GO75747 1445 aa28.07■■■□□ 2.08
SYNDIG1-201ENST00000376862 ABCC2Q92887 1545 aa28.06■■■□□ 2.08
SYNDIG1-201ENST00000376862 CENPJQ9HC77 1338 aaPredicted RBP28.05■■■□□ 2.08
SYNDIG1-201ENST00000376862 MRE11P49959 708 aa28.05■■■□□ 2.08
SYNDIG1-201ENST00000376862 CCDC141Q6ZP82 1450 aa28.03■■■□□ 2.08
SYNDIG1-201ENST00000376862 NINLQ9Y2I6 1382 aa28.02■■■□□ 2.08
SYNDIG1-201ENST00000376862 ASXL1Q8IXJ9 1541 aa28.02■■■□□ 2.08
SYNDIG1-201ENST00000376862 PDZRN3Q9UPQ7 1066 aa28.01■■■□□ 2.08
SYNDIG1-201ENST00000376862 ERBB4Q15303 1308 aa28.01■■■□□ 2.07
SYNDIG1-201ENST00000376862 PCDHB15Q9Y5E8 787 aa28■■■□□ 2.07
SYNDIG1-201ENST00000376862 GRPEL1Q9HAV7 217 aa28■■■□□ 2.07
SYNDIG1-201ENST00000376862 CHMP5Q9NZZ3 219 aa28■■■□□ 2.07
SYNDIG1-201ENST00000376862 RNF17Q9BXT8 1623 aaKnown RBP27.99■■■□□ 2.07
SYNDIG1-201ENST00000376862 ESPNB1AK53 854 aa27.99■■■□□ 2.07
SYNDIG1-201ENST00000376862 PMFBP1Q8TBY8 1022 aa27.99■■■□□ 2.07
SYNDIG1-201ENST00000376862 MYH16Q9H6N6 1097 aa27.98■■■□□ 2.07
SYNDIG1-201ENST00000376862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.97■■■□□ 2.07
SYNDIG1-201ENST00000376862 PLXNC1O60486 1568 aa27.97■■■□□ 2.07
SYNDIG1-201ENST00000376862 SYNMO15061 1565 aa27.97■■■□□ 2.07
SYNDIG1-201ENST00000376862 ARHGEF5Q12774 1597 aa27.96■■■□□ 2.07
SYNDIG1-201ENST00000376862 TNNQ9UQP3 1299 aa27.95■■■□□ 2.07
SYNDIG1-201ENST00000376862 ZMYM3Q14202 1370 aa27.94■■■□□ 2.06
SYNDIG1-201ENST00000376862 RTEL1-TNFRSF6BF6WH68 1400 aa27.93■■■□□ 2.06
SYNDIG1-201ENST00000376862 RLBP1P12271 317 aa27.92■■■□□ 2.06
SYNDIG1-201ENST00000376862 C22orf23Q9BZE7 217 aa27.9■■■□□ 2.06
SYNDIG1-201ENST00000376862 MYOM1P52179 1685 aa27.9■■■□□ 2.06
SYNDIG1-201ENST00000376862 WWC1Q8IX03 1113 aa27.89■■■□□ 2.06
SYNDIG1-201ENST00000376862 IQGAP1P46940 1657 aa27.89■■■□□ 2.06
SYNDIG1-201ENST00000376862 UNC13BO14795 1591 aa27.89■■■□□ 2.06
SYNDIG1-201ENST00000376862 ERCC6L2Q5T890 1561 aa27.89■■■□□ 2.06
SYNDIG1-201ENST00000376862 MFAP1P55081 439 aaKnown RBP27.88■■■□□ 2.05
SYNDIG1-201ENST00000376862 DDX11L8A8MPP1 907 aa27.87■■■□□ 2.05
SYNDIG1-201ENST00000376862 RARSP54136 660 aaKnown RBP27.87■■■□□ 2.05
SYNDIG1-201ENST00000376862 NPC1L1Q9UHC9 1359 aa27.86■■■□□ 2.05
SYNDIG1-201ENST00000376862 ZNF692Q9BU19 519 aaPredicted RBP27.86■■■□□ 2.05
SYNDIG1-201ENST00000376862 SHROOM2Q13796 1616 aa27.86■■■□□ 2.05
SYNDIG1-201ENST00000376862 TRIM44Q96DX7 344 aaPredicted RBP27.85■■■□□ 2.05
SYNDIG1-201ENST00000376862 CDCA8Q53HL2 280 aa27.85■■■□□ 2.05
SYNDIG1-201ENST00000376862 RWDD1Q9H446 243 aaPredicted RBP27.85■■■□□ 2.05
SYNDIG1-201ENST00000376862 BCL2L13Q9BXK5 485 aa27.84■■■□□ 2.05
SYNDIG1-201ENST00000376862 CDC42BPBQ9Y5S2 1711 aa27.84■■■□□ 2.05
SYNDIG1-201ENST00000376862 GAS2L3Q86XJ1 694 aa27.83■■■□□ 2.05
SYNDIG1-201ENST00000376862 NGEFQ8N5V2 710 aa27.83■■■□□ 2.05
SYNDIG1-201ENST00000376862 SAMD9LQ8IVG5 1584 aa27.83■■■□□ 2.05
SYNDIG1-201ENST00000376862 AAMPQ13685 434 aa27.83■■■□□ 2.05
SYNDIG1-201ENST00000376862 ISY1Q9ULR0 285 aaKnown RBP27.83■■■□□ 2.05
SYNDIG1-201ENST00000376862 NEUROD2Q15784 382 aa27.81■■■□□ 2.04
SYNDIG1-201ENST00000376862 HSCBQ8IWL3 235 aa27.81■■■□□ 2.04
SYNDIG1-201ENST00000376862 IQGAP3Q86VI3 1631 aa27.8■■■□□ 2.04
SYNDIG1-201ENST00000376862 TPM2P07951 284 aa27.8■■■□□ 2.04
SYNDIG1-201ENST00000376862 PREX2Q70Z35 1606 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 478.6 ms