RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 EIF5BO60841 1220 aaKnown RBP21.39■■□□□ 1.01
TRIM39-201ENST00000376656 UNC13BO14795 1591 aa21.38■■□□□ 1.01
TRIM39-201ENST00000376656 TRMT2AQ8IZ69 625 aaKnown RBP21.38■■□□□ 1.01
TRIM39-201ENST00000376656 EIF3AQ14152 1382 aaKnown RBP21.38■■□□□ 1.01
TRIM39-201ENST00000376656 CLASP1Q7Z460 1538 aa21.37■■□□□ 1.01
TRIM39-201ENST00000376656 IGHDP01880 384 aa21.37■■□□□ 1.01
TRIM39-201ENST00000376656 NUP160Q12769 1436 aa21.37■■□□□ 1.01
TRIM39-201ENST00000376656 CDC42BPBQ9Y5S2 1711 aa21.36■■□□□ 1.01
TRIM39-201ENST00000376656 RNF17Q9BXT8 1623 aaKnown RBP21.35■■□□□ 1.01
TRIM39-201ENST00000376656 VIRMAQ69YN4 1812 aaKnown RBP21.35■■□□□ 1.01
TRIM39-201ENST00000376656 SEC24BO95487 1268 aa21.34■■□□□ 1.01
TRIM39-201ENST00000376656 FAM43AQ8N2R8 423 aa21.34■■□□□ 1.01
TRIM39-201ENST00000376656 NKTRP30414 1462 aaKnown RBP21.34■■□□□ 1.01
TRIM39-201ENST00000376656 APAF1O14727 1248 aa21.34■■□□□ 1.01
TRIM39-201ENST00000376656 POGKQ9P215 609 aa21.34■■□□□ 1.01
TRIM39-201ENST00000376656 PREX2Q70Z35 1606 aa21.31■■□□□ 1
TRIM39-201ENST00000376656 IQGAP3Q86VI3 1631 aa21.31■■□□□ 1
TRIM39-201ENST00000376656 SYCP2Q9BX26 1530 aa21.31■■□□□ 1
TRIM39-201ENST00000376656 RSPH4AQ5TD94 716 aa21.31■■□□□ 1
TRIM39-201ENST00000376656 PIK3C2GO75747 1445 aa21.31■■□□□ 1
TRIM39-201ENST00000376656 DMRT2Q9Y5R5 561 aa21.3■■□□□ 1
TRIM39-201ENST00000376656 ASXL1Q8IXJ9 1541 aa21.3■■□□□ 1
TRIM39-201ENST00000376656 UBE2Q2Q8WVN8 375 aa21.29■■□□□ 1
TRIM39-201ENST00000376656 SLKQ9H2G2 1235 aaPredicted RBP21.28■■□□□ 1
TRIM39-201ENST00000376656 SYNMO15061 1565 aa21.28■■□□□ 1
TRIM39-201ENST00000376656 IQGAP1P46940 1657 aa21.27■■□□□ 1
TRIM39-201ENST00000376656 ATP10AO60312 1499 aa21.26■□□□□ 0.99
TRIM39-201ENST00000376656 E9PSI1 815 aa21.26■□□□□ 0.99
TRIM39-201ENST00000376656 ABCC2Q92887 1545 aa21.26■□□□□ 0.99
TRIM39-201ENST00000376656 MAST1Q9Y2H9 1570 aa21.25■□□□□ 0.99
TRIM39-201ENST00000376656 PANK1Q8TE04 598 aa21.25■□□□□ 0.99
TRIM39-201ENST00000376656 RSPH6AQ9H0K4 717 aa21.25■□□□□ 0.99
TRIM39-201ENST00000376656 COG6Q9Y2V7 657 aa21.25■□□□□ 0.99
TRIM39-201ENST00000376656 CGNL1Q0VF96 1302 aa21.24■□□□□ 0.99
TRIM39-201ENST00000376656 NLRP1Q9C000 1473 aa21.24■□□□□ 0.99
TRIM39-201ENST00000376656 BECN1Q14457 450 aa21.24■□□□□ 0.99
TRIM39-201ENST00000376656 CLUAP1Q96AJ1 413 aa21.24■□□□□ 0.99
TRIM39-201ENST00000376656 MAPK8IP3Q9UPT6 1336 aa21.24■□□□□ 0.99
TRIM39-201ENST00000376656 MADDQ8WXG6 1647 aa21.24■□□□□ 0.99
TRIM39-201ENST00000376656 MYOM1P52179 1685 aa21.23■□□□□ 0.99
TRIM39-201ENST00000376656 CDCA8Q53HL2 280 aa21.22■□□□□ 0.99
TRIM39-201ENST00000376656 PDE3AQ14432 1141 aa21.22■□□□□ 0.99
TRIM39-201ENST00000376656 ARHGAP5Q13017 1502 aa21.21■□□□□ 0.99
TRIM39-201ENST00000376656 CENPJQ9HC77 1338 aaPredicted RBP21.2■□□□□ 0.98
TRIM39-201ENST00000376656 CANXP27824 592 aaKnown RBP21.2■□□□□ 0.98
TRIM39-201ENST00000376656 NPC1L1Q9UHC9 1359 aa21.2■□□□□ 0.98
TRIM39-201ENST00000376656 ANTXR1Q9H6X2 564 aa21.2■□□□□ 0.98
TRIM39-201ENST00000376656 PLXNC1O60486 1568 aa21.2■□□□□ 0.98
TRIM39-201ENST00000376656 SCAF11Q99590 1463 aaKnown RBP21.19■□□□□ 0.98
TRIM39-201ENST00000376656 RRAGDQ9NQL2 400 aaPredicted RBP21.19■□□□□ 0.98
TRIM39-201ENST00000376656 TTC37Q6PGP7 1564 aa21.18■□□□□ 0.98
TRIM39-201ENST00000376656 DUOX2Q9NRD8 1548 aa21.16■□□□□ 0.98
TRIM39-201ENST00000376656 NINLQ9Y2I6 1382 aa21.15■□□□□ 0.98
TRIM39-201ENST00000376656 L1TD1Q5T7N2 865 aaKnown RBP21.14■□□□□ 0.98
TRIM39-201ENST00000376656 WWC1Q8IX03 1113 aa21.14■□□□□ 0.98
TRIM39-201ENST00000376656 TBC1D2Q9BYX2 928 aa21.14■□□□□ 0.97
TRIM39-201ENST00000376656 ARXQ96QS3 562 aa21.13■□□□□ 0.97
TRIM39-201ENST00000376656 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
TRIM39-201ENST00000376656 TBC1D32Q96NH3 1257 aa21.13■□□□□ 0.97
TRIM39-201ENST00000376656 TNNQ9UQP3 1299 aa21.12■□□□□ 0.97
TRIM39-201ENST00000376656 PCDHB15Q9Y5E8 787 aa21.12■□□□□ 0.97
TRIM39-201ENST00000376656 SPHKAPQ2M3C7 1700 aa21.12■□□□□ 0.97
TRIM39-201ENST00000376656 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.12■□□□□ 0.97
TRIM39-201ENST00000376656 SCAPERQ9BY12 1400 aa21.12■□□□□ 0.97
TRIM39-201ENST00000376656 CARD14Q9BXL6 1004 aa21.11■□□□□ 0.97
TRIM39-201ENST00000376656 KDM5AP29375 1690 aaKnown RBP21.11■□□□□ 0.97
TRIM39-201ENST00000376656 UPF2Q9HAU5 1272 aaKnown RBP21.11■□□□□ 0.97
TRIM39-201ENST00000376656 NGEFQ8N5V2 710 aa21.1■□□□□ 0.97
TRIM39-201ENST00000376656 RLBP1P12271 317 aa21.1■□□□□ 0.97
TRIM39-201ENST00000376656 PMFBP1Q8TBY8 1022 aa21.1■□□□□ 0.97
TRIM39-201ENST00000376656 PDZRN3Q9UPQ7 1066 aa21.1■□□□□ 0.97
TRIM39-201ENST00000376656 NEUROD2Q15784 382 aa21.09■□□□□ 0.97
TRIM39-201ENST00000376656 SPRYD3Q8NCJ5 442 aa21.09■□□□□ 0.97
TRIM39-201ENST00000376656 CEP152O94986 1710 aa21.09■□□□□ 0.97
TRIM39-201ENST00000376656 RARSP54136 660 aaKnown RBP21.08■□□□□ 0.97
TRIM39-201ENST00000376656 RRP7AQ9Y3A4 280 aaKnown RBP21.08■□□□□ 0.96
TRIM39-201ENST00000376656 XRCC6P12956 609 aaKnown RBP eCLIP21.07■□□□□ 0.96
TRIM39-201ENST00000376656 BCL2L13Q9BXK5 485 aa21.06■□□□□ 0.96
TRIM39-201ENST00000376656 ERVK-7P63135 1459 aa21.05■□□□□ 0.96
TRIM39-201ENST00000376656 TRPM2O94759 1503 aa21.05■□□□□ 0.96
TRIM39-201ENST00000376656 GZF1Q9H116 711 aaPredicted RBP21.04■□□□□ 0.96
TRIM39-201ENST00000376656 CLTCL1P53675 1640 aa21.04■□□□□ 0.96
TRIM39-201ENST00000376656 GOLGA6L3A6NEY3 463 aa21.03■□□□□ 0.96
TRIM39-201ENST00000376656 MCM4P33991 863 aa21.03■□□□□ 0.96
TRIM39-201ENST00000376656 POLR3AO14802 1390 aaPredicted RBP21.03■□□□□ 0.96
TRIM39-201ENST00000376656 PANK2Q9BZ23 570 aa21.03■□□□□ 0.96
TRIM39-201ENST00000376656 FSD2A1L4K1 749 aa21.03■□□□□ 0.96
TRIM39-201ENST00000376656 ZMYM3Q14202 1370 aa21.01■□□□□ 0.95
TRIM39-201ENST00000376656 CFAP70Q5T0N1 1121 aa21.01■□□□□ 0.95
TRIM39-201ENST00000376656 STAC3Q96MF2 364 aa21■□□□□ 0.95
TRIM39-201ENST00000376656 AAMPQ13685 434 aa21■□□□□ 0.95
TRIM39-201ENST00000376656 TCP11L2Q8N4U5 519 aa21■□□□□ 0.95
TRIM39-201ENST00000376656 RWDD1Q9H446 243 aaPredicted RBP21■□□□□ 0.95
TRIM39-201ENST00000376656 TNNT2P45379 298 aaPredicted RBP20.99■□□□□ 0.95
TRIM39-201ENST00000376656 SHPRHQ149N8 1683 aa20.99■□□□□ 0.95
TRIM39-201ENST00000376656 PTPRTO14522 1441 aa20.99■□□□□ 0.95
TRIM39-201ENST00000376656 RUNDC1Q96C34 613 aa20.99■□□□□ 0.95
TRIM39-201ENST00000376656 TRAPPC8Q9Y2L5 1435 aa20.97■□□□□ 0.95
TRIM39-201ENST00000376656 KIAA1210Q9ULL0 1709 aa20.96■□□□□ 0.95
TRIM39-201ENST00000376656 IQSEC2Q5JU85 1478 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms