RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 PANK3Q9H999 370 aa25.46■■□□□ 1.67
PPP1R3F-202ENST00000376188 SYNMO15061 1565 aa25.45■■□□□ 1.67
PPP1R3F-202ENST00000376188 NUDCQ9Y266 331 aa25.44■■□□□ 1.66
PPP1R3F-202ENST00000376188 ADGRB3O60242 1522 aa25.43■■□□□ 1.66
PPP1R3F-202ENST00000376188 IRX6P78412 446 aaPredicted RBP25.43■■□□□ 1.66
PPP1R3F-202ENST00000376188 NRXN1Q9ULB1 1477 aa25.41■■□□□ 1.66
PPP1R3F-202ENST00000376188 NPATQ14207 1427 aa25.4■■□□□ 1.66
PPP1R3F-202ENST00000376188 KDM5AP29375 1690 aaKnown RBP25.4■■□□□ 1.66
PPP1R3F-202ENST00000376188 SLC24A1O60721 1099 aa25.39■■□□□ 1.66
PPP1R3F-202ENST00000376188 ZMYM4Q5VZL5 1548 aa25.39■■□□□ 1.66
PPP1R3F-202ENST00000376188 CFAP65Q6ZU64 1925 aaKnown RBP25.39■■□□□ 1.66
PPP1R3F-202ENST00000376188 ABCC3O15438 1527 aa25.39■■□□□ 1.65
PPP1R3F-202ENST00000376188 PPP4R2Q9NY27 417 aa25.38■■□□□ 1.65
PPP1R3F-202ENST00000376188 INSRP06213 1382 aa25.38■■□□□ 1.65
PPP1R3F-202ENST00000376188 RICTORQ6R327 1708 aa25.38■■□□□ 1.65
PPP1R3F-202ENST00000376188 MYOM1P52179 1685 aa25.37■■□□□ 1.65
PPP1R3F-202ENST00000376188 CAMSAP1Q5T5Y3 1602 aa25.37■■□□□ 1.65
PPP1R3F-202ENST00000376188 CC2D1BQ5T0F9 858 aaKnown RBP25.37■■□□□ 1.65
PPP1R3F-202ENST00000376188 PPLO60437 1756 aa25.37■■□□□ 1.65
PPP1R3F-202ENST00000376188 DIP2CQ9Y2E4 1556 aa25.36■■□□□ 1.65
PPP1R3F-202ENST00000376188 ADGRF5Q8IZF2 1346 aa25.35■■□□□ 1.65
PPP1R3F-202ENST00000376188 SETBP1Q9Y6X0 1596 aa25.35■■□□□ 1.65
PPP1R3F-202ENST00000376188 MYO3AQ8NEV4 1616 aa25.35■■□□□ 1.65
PPP1R3F-202ENST00000376188 GGT6Q6P531 493 aa25.34■■□□□ 1.65
PPP1R3F-202ENST00000376188 CFAP70Q5T0N1 1121 aa25.33■■□□□ 1.64
PPP1R3F-202ENST00000376188 ZC3H13Q5T200 1668 aaKnown RBP25.32■■□□□ 1.64
PPP1R3F-202ENST00000376188 GLI2P10070 1586 aa25.32■■□□□ 1.64
PPP1R3F-202ENST00000376188 KNSTRNQ9Y448 316 aa25.32■■□□□ 1.64
PPP1R3F-202ENST00000376188 RNF123Q5XPI4 1314 aa25.31■■□□□ 1.64
PPP1R3F-202ENST00000376188 NOS1P29475 1434 aa25.3■■□□□ 1.64
PPP1R3F-202ENST00000376188 RAPGEF3O95398 923 aa25.29■■□□□ 1.64
PPP1R3F-202ENST00000376188 ASXL1Q8IXJ9 1541 aa25.29■■□□□ 1.64
PPP1R3F-202ENST00000376188 SBNO2Q9Y2G9 1366 aa25.28■■□□□ 1.64
PPP1R3F-202ENST00000376188 BLMP54132 1417 aaPredicted RBP25.28■■□□□ 1.64
PPP1R3F-202ENST00000376188 SIGLEC1Q9BZZ2 1709 aa25.27■■□□□ 1.64
PPP1R3F-202ENST00000376188 PIK3C2BO00750 1634 aa25.27■■□□□ 1.64
PPP1R3F-202ENST00000376188 NPC1L1Q9UHC9 1359 aa25.27■■□□□ 1.64
PPP1R3F-202ENST00000376188 RPGRIP1LQ68CZ1 1315 aa25.27■■□□□ 1.64
PPP1R3F-202ENST00000376188 ERVK-7P63135 1459 aa25.26■■□□□ 1.64
PPP1R3F-202ENST00000376188 PIK3C2GO75747 1445 aa25.26■■□□□ 1.63
PPP1R3F-202ENST00000376188 PDE3BQ13370 1112 aa25.25■■□□□ 1.63
PPP1R3F-202ENST00000376188 AMER1Q5JTC6 1135 aaPredicted RBP25.25■■□□□ 1.63
PPP1R3F-202ENST00000376188 CHGAP10645 457 aaKnown RBP25.24■■□□□ 1.63
PPP1R3F-202ENST00000376188 ARHGAP31Q2M1Z3 1444 aa25.24■■□□□ 1.63
PPP1R3F-202ENST00000376188 SENP3-EIF4A1A0A087X0R7 540 aa25.2■■□□□ 1.62
PPP1R3F-202ENST00000376188 ADGRB1O14514 1584 aa25.19■■□□□ 1.62
PPP1R3F-202ENST00000376188 C14orf93Q9H972 538 aaKnown RBP25.19■■□□□ 1.62
PPP1R3F-202ENST00000376188 PPP2R1AP30153 589 aa25.18■■□□□ 1.62
PPP1R3F-202ENST00000376188 QRICH2Q9H0J4 1663 aa25.18■■□□□ 1.62
PPP1R3F-202ENST00000376188 RIMBP3CA6NJZ7 1639 aa25.17■■□□□ 1.62
PPP1R3F-202ENST00000376188 RIMBP3BA6NNM3 1639 aa25.17■■□□□ 1.62
PPP1R3F-202ENST00000376188 RIMBP3Q9UFD9 1639 aa25.17■■□□□ 1.62
PPP1R3F-202ENST00000376188 CENPJQ9HC77 1338 aaPredicted RBP25.17■■□□□ 1.62
PPP1R3F-202ENST00000376188 YEATS2Q9ULM3 1422 aa25.16■■□□□ 1.62
PPP1R3F-202ENST00000376188 CYB5RLQ6IPT4 315 aa25.16■■□□□ 1.62
PPP1R3F-202ENST00000376188 NEXMIFQ5QGS0 1516 aa25.15■■□□□ 1.62
PPP1R3F-202ENST00000376188 B4GALNT3Q6L9W6 998 aa25.14■■□□□ 1.62
PPP1R3F-202ENST00000376188 RBM19Q9Y4C8 960 aaKnown RBP25.14■■□□□ 1.62
PPP1R3F-202ENST00000376188 DIP2BQ9P265 1576 aa25.14■■□□□ 1.61
PPP1R3F-202ENST00000376188 PREX1Q8TCU6 1659 aa25.11■■□□□ 1.61
PPP1R3F-202ENST00000376188 SALL2Q9Y467 1007 aaPredicted RBP25.1■■□□□ 1.61
PPP1R3F-202ENST00000376188 VGFO15240 615 aaPredicted RBP25.1■■□□□ 1.61
PPP1R3F-202ENST00000376188 WDR43Q15061 677 aaKnown RBP eCLIP25.1■■□□□ 1.61
PPP1R3F-202ENST00000376188 SLC52A1Q9NWF4 448 aa25.08■■□□□ 1.61
PPP1R3F-202ENST00000376188 RCAN3Q9UKA8 241 aa25.08■■□□□ 1.61
PPP1R3F-202ENST00000376188 ADAMTS8Q9UP79 889 aa25.07■■□□□ 1.6
PPP1R3F-202ENST00000376188 TRAK1Q9UPV9 953 aa25.07■■□□□ 1.6
PPP1R3F-202ENST00000376188 ARHGEF28Q8N1W1 1705 aaKnown RBP25.07■■□□□ 1.6
PPP1R3F-202ENST00000376188 ZFYVE9O95405 1425 aa25.07■■□□□ 1.6
PPP1R3F-202ENST00000376188 MYO5BQ9ULV0 1848 aa25.06■■□□□ 1.6
PPP1R3F-202ENST00000376188 RRP1P56182 461 aaKnown RBP25.06■■□□□ 1.6
PPP1R3F-202ENST00000376188 REREQ9P2R6 1566 aa25.05■■□□□ 1.6
PPP1R3F-202ENST00000376188 TSPOAP1O95153 1857 aa25.04■■□□□ 1.6
PPP1R3F-202ENST00000376188 FAM69CQ0P6D2 419 aa25.04■■□□□ 1.6
PPP1R3F-202ENST00000376188 TMEM131LA2VDJ0 1609 aa25.03■■□□□ 1.6
PPP1R3F-202ENST00000376188 IDI1Q13907 227 aa25.03■■□□□ 1.6
PPP1R3F-202ENST00000376188 CARD14Q9BXL6 1004 aa25.03■■□□□ 1.6
PPP1R3F-202ENST00000376188 TMEM132EQ6IEE7 984 aa25.02■■□□□ 1.6
PPP1R3F-202ENST00000376188 CCDC136Q96JN2 1154 aa25.02■■□□□ 1.6
PPP1R3F-202ENST00000376188 CDCA7LQ96GN5 454 aa25.01■■□□□ 1.59
PPP1R3F-202ENST00000376188 USP32Q8NFA0 1604 aa25.01■■□□□ 1.59
PPP1R3F-202ENST00000376188 PUS7Q96PZ0 661 aaKnown RBP25■■□□□ 1.59
PPP1R3F-202ENST00000376188 AGLP35573 1532 aa24.99■■□□□ 1.59
PPP1R3F-202ENST00000376188 NSD3Q9BZ95 1437 aa24.96■■□□□ 1.59
PPP1R3F-202ENST00000376188 PPP6R1Q9UPN7 881 aa24.94■■□□□ 1.58
PPP1R3F-202ENST00000376188 EVC2Q86UK5 1308 aa24.94■■□□□ 1.58
PPP1R3F-202ENST00000376188 NUTM2DQ5VT03 806 aaPredicted RBP24.94■■□□□ 1.58
PPP1R3F-202ENST00000376188 TULP4Q9NRJ4 1543 aa24.94■■□□□ 1.58
PPP1R3F-202ENST00000376188 PLEKHH1Q9ULM0 1364 aa24.93■■□□□ 1.58
PPP1R3F-202ENST00000376188 POLR3AO14802 1390 aaPredicted RBP24.92■■□□□ 1.58
PPP1R3F-202ENST00000376188 ZNF521Q96K83 1311 aa24.92■■□□□ 1.58
PPP1R3F-202ENST00000376188 SLC12A5Q9H2X9 1139 aa24.91■■□□□ 1.58
PPP1R3F-202ENST00000376188 CLTCQ00610 1675 aaKnown RBP24.89■■□□□ 1.57
PPP1R3F-202ENST00000376188 MYT1Q01538 1121 aa24.88■■□□□ 1.57
PPP1R3F-202ENST00000376188 GOLGA2Q08379 1002 aa24.87■■□□□ 1.57
PPP1R3F-202ENST00000376188 NGEFQ8N5V2 710 aa24.87■■□□□ 1.57
PPP1R3F-202ENST00000376188 FANCIQ9NVI1 1328 aa24.87■■□□□ 1.57
PPP1R3F-202ENST00000376188 ANKRD36BQ8N2N9 1353 aa24.87■■□□□ 1.57
PPP1R3F-202ENST00000376188 MORC1Q86VD1 984 aa24.86■■□□□ 1.57
PPP1R3F-202ENST00000376188 CGNL1Q0VF96 1302 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms