RNA–Protein interactions for RNA: ENST00000375440.8

CUL4A-202, Transcript of cullin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL4A, Length 2,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-202ENST00000375440 PNISRQ8TF01 805 aaKnown RBP35.78■■■■□ 3.32
CUL4A-202ENST00000375440 ADGRF5Q8IZF2 1346 aa35.77■■■■□ 3.32
CUL4A-202ENST00000375440 WASHC2CQ9Y4E1 1318 aa35.77■■■■□ 3.32
CUL4A-202ENST00000375440 PARD3Q8TEW0 1356 aa35.77■■■■□ 3.32
CUL4A-202ENST00000375440 TMC1Q8TDI8 760 aa35.76■■■■□ 3.31
CUL4A-202ENST00000375440 BRD4O60885 1362 aaPredicted RBP35.76■■■■□ 3.31
CUL4A-202ENST00000375440 CAMSAP1Q5T5Y3 1602 aa35.75■■■■□ 3.31
CUL4A-202ENST00000375440 NRXN1Q9ULB1 1477 aa35.75■■■■□ 3.31
CUL4A-202ENST00000375440 BCANQ96GW7 911 aa35.73■■■■□ 3.31
CUL4A-202ENST00000375440 PANK3Q9H999 370 aa35.72■■■■□ 3.31
CUL4A-202ENST00000375440 YEATS2Q9ULM3 1422 aa35.72■■■■□ 3.31
CUL4A-202ENST00000375440 CFAP70Q5T0N1 1121 aa35.71■■■■□ 3.31
CUL4A-202ENST00000375440 DIP2BQ9P265 1576 aa35.7■■■■□ 3.31
CUL4A-202ENST00000375440 SIGLEC1Q9BZZ2 1709 aa35.69■■■■□ 3.3
CUL4A-202ENST00000375440 EIF3AQ14152 1382 aaKnown RBP35.68■■■■□ 3.3
CUL4A-202ENST00000375440 LRPPRCP42704 1394 aaKnown RBP35.67■■■■□ 3.3
CUL4A-202ENST00000375440 NOS1P29475 1434 aa35.66■■■■□ 3.3
CUL4A-202ENST00000375440 PPLO60437 1756 aa35.65■■■■□ 3.3
CUL4A-202ENST00000375440 FAM69CQ0P6D2 419 aa35.65■■■■□ 3.3
CUL4A-202ENST00000375440 CHGAP10645 457 aaKnown RBP35.63■■■■□ 3.29
CUL4A-202ENST00000375440 NLRP13Q86W25 1043 aa35.63■■■■□ 3.29
CUL4A-202ENST00000375440 ZC3H13Q5T200 1668 aaKnown RBP35.61■■■■□ 3.29
CUL4A-202ENST00000375440 ZMYM4Q5VZL5 1548 aa35.61■■■■□ 3.29
CUL4A-202ENST00000375440 PIK3C2BO00750 1634 aa35.61■■■■□ 3.29
CUL4A-202ENST00000375440 CDCA8Q53HL2 280 aa35.6■■■■□ 3.29
CUL4A-202ENST00000375440 SYNMO15061 1565 aa35.6■■■■□ 3.29
CUL4A-202ENST00000375440 ARHGAP31Q2M1Z3 1444 aa35.59■■■■□ 3.29
CUL4A-202ENST00000375440 CC2D1BQ5T0F9 858 aaKnown RBP35.58■■■■□ 3.29
CUL4A-202ENST00000375440 SETBP1Q9Y6X0 1596 aa35.56■■■■□ 3.28
CUL4A-202ENST00000375440 PIK3C2GO75747 1445 aa35.56■■■■□ 3.28
CUL4A-202ENST00000375440 MYOM1P52179 1685 aa35.56■■■■□ 3.28
CUL4A-202ENST00000375440 TSPOAP1O95153 1857 aa35.55■■■■□ 3.28
CUL4A-202ENST00000375440 RPGRIP1LQ68CZ1 1315 aa35.54■■■■□ 3.28
CUL4A-202ENST00000375440 MYO3AQ8NEV4 1616 aa35.52■■■■□ 3.28
CUL4A-202ENST00000375440 KDM5AP29375 1690 aaKnown RBP35.52■■■■□ 3.28
CUL4A-202ENST00000375440 SMG6Q86US8 1419 aaKnown RBP35.5■■■■□ 3.27
CUL4A-202ENST00000375440 ERVK-7P63135 1459 aa35.5■■■■□ 3.27
CUL4A-202ENST00000375440 C14orf93Q9H972 538 aaKnown RBP35.49■■■■□ 3.27
CUL4A-202ENST00000375440 SLC24A1O60721 1099 aa35.47■■■■□ 3.27
CUL4A-202ENST00000375440 ADGRB1O14514 1584 aa35.46■■■■□ 3.27
CUL4A-202ENST00000375440 IRX6P78412 446 aaPredicted RBP35.45■■■■□ 3.27
CUL4A-202ENST00000375440 KNSTRNQ9Y448 316 aa35.45■■■■□ 3.27
CUL4A-202ENST00000375440 SBNO2Q9Y2G9 1366 aa35.44■■■■□ 3.26
CUL4A-202ENST00000375440 AMER1Q5JTC6 1135 aaPredicted RBP35.43■■■■□ 3.26
CUL4A-202ENST00000375440 NEXMIFQ5QGS0 1516 aa35.43■■■■□ 3.26
CUL4A-202ENST00000375440 SENP3-EIF4A1A0A087X0R7 540 aa35.42■■■■□ 3.26
CUL4A-202ENST00000375440 IDI1Q13907 227 aa35.4■■■■□ 3.26
CUL4A-202ENST00000375440 PREX1Q8TCU6 1659 aa35.4■■■■□ 3.26
CUL4A-202ENST00000375440 NUDCQ9Y266 331 aa35.4■■■■□ 3.26
CUL4A-202ENST00000375440 ASXL1Q8IXJ9 1541 aa35.39■■■■□ 3.26
CUL4A-202ENST00000375440 REREQ9P2R6 1566 aa35.38■■■■□ 3.25
CUL4A-202ENST00000375440 CENPJQ9HC77 1338 aaPredicted RBP35.37■■■■□ 3.25
CUL4A-202ENST00000375440 SLC52A1Q9NWF4 448 aa35.37■■■■□ 3.25
CUL4A-202ENST00000375440 ERICH6BQ5W0A0 696 aa35.36■■■■□ 3.25
CUL4A-202ENST00000375440 TRAK1Q9UPV9 953 aa35.35■■■■□ 3.25
CUL4A-202ENST00000375440 VGFO15240 615 aaPredicted RBP35.34■■■■□ 3.25
CUL4A-202ENST00000375440 TMEM132EQ6IEE7 984 aa35.34■■■■□ 3.25
CUL4A-202ENST00000375440 NPC1L1Q9UHC9 1359 aa35.34■■■■□ 3.25
CUL4A-202ENST00000375440 MYO5BQ9ULV0 1848 aa35.33■■■■□ 3.25
CUL4A-202ENST00000375440 QRICH2Q9H0J4 1663 aa35.32■■■■□ 3.25
CUL4A-202ENST00000375440 INSRP06213 1382 aa35.32■■■■□ 3.24
CUL4A-202ENST00000375440 AGLP35573 1532 aa35.32■■■■□ 3.24
CUL4A-202ENST00000375440 NUTM2DQ5VT03 806 aaPredicted RBP35.31■■■■□ 3.24
CUL4A-202ENST00000375440 TMEM131LA2VDJ0 1609 aa35.3■■■■□ 3.24
CUL4A-202ENST00000375440 PPP2R1AP30153 589 aa35.3■■■■□ 3.24
CUL4A-202ENST00000375440 KIF13AQ9H1H9 1805 aa35.29■■■■□ 3.24
CUL4A-202ENST00000375440 ZFYVE9O95405 1425 aa35.29■■■■□ 3.24
CUL4A-202ENST00000375440 TSHZ2Q9NRE2 1034 aa35.28■■■■□ 3.24
CUL4A-202ENST00000375440 BLMP54132 1417 aaPredicted RBP35.28■■■■□ 3.24
CUL4A-202ENST00000375440 FBXO31Q5XUX0 539 aaPredicted RBP35.24■■■■□ 3.23
CUL4A-202ENST00000375440 CARD14Q9BXL6 1004 aa35.23■■■■□ 3.23
CUL4A-202ENST00000375440 RNF123Q5XPI4 1314 aa35.23■■■■□ 3.23
CUL4A-202ENST00000375440 ARHGEF28Q8N1W1 1705 aaKnown RBP35.22■■■■□ 3.23
CUL4A-202ENST00000375440 PPP6R1Q9UPN7 881 aa35.21■■■■□ 3.23
CUL4A-202ENST00000375440 PPP4R2Q9NY27 417 aa35.18■■■■□ 3.22
CUL4A-202ENST00000375440 CLTCQ00610 1675 aaKnown RBP35.17■■■■□ 3.22
CUL4A-202ENST00000375440 SALL2Q9Y467 1007 aaPredicted RBP35.15■■■■□ 3.22
CUL4A-202ENST00000375440 ARHGEF40Q8TER5 1519 aa35.14■■■■□ 3.22
CUL4A-202ENST00000375440 ADAMTS8Q9UP79 889 aa35.14■■■■□ 3.22
CUL4A-202ENST00000375440 PDE3BQ13370 1112 aa35.13■■■■□ 3.21
CUL4A-202ENST00000375440 TULP4Q9NRJ4 1543 aa35.09■■■■□ 3.21
CUL4A-202ENST00000375440 SLC12A5Q9H2X9 1139 aa35.08■■■■□ 3.21
CUL4A-202ENST00000375440 SPATA31D1Q6ZQQ2 1576 aa35.07■■■■□ 3.2
CUL4A-202ENST00000375440 PUS7Q96PZ0 661 aaKnown RBP35.05■■■■□ 3.2
CUL4A-202ENST00000375440 WDR43Q15061 677 aaKnown RBP eCLIP35.05■■■■□ 3.2
CUL4A-202ENST00000375440 NSD3Q9BZ95 1437 aa35.04■■■■□ 3.2
CUL4A-202ENST00000375440 EVC2Q86UK5 1308 aa35.03■■■■□ 3.2
CUL4A-202ENST00000375440 MLECQ14165 292 aa35.03■■■■□ 3.2
CUL4A-202ENST00000375440 SENP3Q9H4L4 574 aaPredicted RBP35.02■■■■□ 3.2
CUL4A-202ENST00000375440 CDCA7LQ96GN5 454 aa35.01■■■■□ 3.2
CUL4A-202ENST00000375440 STK26Q9P289 416 aa34.99■■■■□ 3.19
CUL4A-202ENST00000375440 STAG3Q9UJ98 1225 aa34.99■■■■□ 3.19
CUL4A-202ENST00000375440 PTPRMP28827 1452 aa34.98■■■■□ 3.19
CUL4A-202ENST00000375440 ALKQ9UM73 1620 aa34.98■■■■□ 3.19
CUL4A-202ENST00000375440 A2ML1A8K2U0 1454 aa34.98■■■■□ 3.19
CUL4A-202ENST00000375440 USP32Q8NFA0 1604 aa34.98■■■■□ 3.19
CUL4A-202ENST00000375440 B4GALNT3Q6L9W6 998 aa34.96■■■■□ 3.19
CUL4A-202ENST00000375440 YTHDC2Q9H6S0 1430 aaKnown RBP34.96■■■■□ 3.19
CUL4A-202ENST00000375440 SAFB2Q14151 953 aaKnown RBP eCLIP34.95■■■■□ 3.19
CUL4A-202ENST00000375440 RCAN3Q9UKA8 241 aa34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms