RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 RRBP1Q9P2E9 1410 aaKnown RBP21.62■■□□□ 1.05
NELFE-201ENST00000375425 GCC2Q8IWJ2 1684 aa21.61■■□□□ 1.05
NELFE-201ENST00000375425 ZFYVE9O95405 1425 aa21.61■■□□□ 1.05
NELFE-201ENST00000375425 RIMS2Q9UQ26 1411 aa21.61■■□□□ 1.05
NELFE-201ENST00000375425 IQGAP3Q86VI3 1631 aa21.59■■□□□ 1.05
NELFE-201ENST00000375425 PROSER2Q86WR7 435 aaPredicted RBP21.59■■□□□ 1.05
NELFE-201ENST00000375425 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.59■■□□□ 1.05
NELFE-201ENST00000375425 RBM33Q96EV2 1170 aaKnown RBP21.59■■□□□ 1.05
NELFE-201ENST00000375425 E9PCH4 1651 aa21.59■■□□□ 1.05
NELFE-201ENST00000375425 NUTM2DQ5VT03 806 aaPredicted RBP21.58■■□□□ 1.05
NELFE-201ENST00000375425 TMEM94Q12767 1356 aa21.58■■□□□ 1.05
NELFE-201ENST00000375425 PLEKHG1Q9ULL1 1385 aa21.58■■□□□ 1.05
NELFE-201ENST00000375425 TMEM131LA2VDJ0 1609 aa21.57■■□□□ 1.04
NELFE-201ENST00000375425 TBX22Q9Y458 520 aa21.55■■□□□ 1.04
NELFE-201ENST00000375425 MYO5BQ9ULV0 1848 aa21.53■■□□□ 1.04
NELFE-201ENST00000375425 NAIPQ13075 1403 aa21.52■■□□□ 1.04
NELFE-201ENST00000375425 XIRP1Q702N8 1843 aaKnown RBP21.5■■□□□ 1.03
NELFE-201ENST00000375425 SOCS7O14512 581 aa21.49■■□□□ 1.03
NELFE-201ENST00000375425 TRIM52Q96A61 297 aa21.47■■□□□ 1.03
NELFE-201ENST00000375425 NKTRP30414 1462 aaKnown RBP21.47■■□□□ 1.03
NELFE-201ENST00000375425 ZNF326Q5BKZ1 582 aaKnown RBP21.46■■□□□ 1.03
NELFE-201ENST00000375425 FAM135BQ49AJ0 1406 aa21.46■■□□□ 1.03
NELFE-201ENST00000375425 ADAMTS13Q76LX8 1427 aa21.46■■□□□ 1.03
NELFE-201ENST00000375425 NWD1Q149M9 1564 aa21.45■■□□□ 1.03
NELFE-201ENST00000375425 MSH6P52701 1360 aa21.45■■□□□ 1.02
NELFE-201ENST00000375425 HFM1A2PYH4 1435 aa21.44■■□□□ 1.02
NELFE-201ENST00000375425 SLAIN2Q9P270 581 aa21.43■■□□□ 1.02
NELFE-201ENST00000375425 MED1Q15648 1581 aaPredicted RBP21.43■■□□□ 1.02
NELFE-201ENST00000375425 AMOTL2Q9Y2J4 779 aa21.41■■□□□ 1.02
NELFE-201ENST00000375425 CHD2O14647 1828 aaKnown RBP21.41■■□□□ 1.02
NELFE-201ENST00000375425 PIK3R4Q99570 1358 aa21.41■■□□□ 1.02
NELFE-201ENST00000375425 C14orf37Q86TY3 774 aa21.4■■□□□ 1.02
NELFE-201ENST00000375425 SLC4A1APQ9BWU0 796 aaKnown RBP21.4■■□□□ 1.02
NELFE-201ENST00000375425 SPHKAPQ2M3C7 1700 aa21.39■■□□□ 1.02
NELFE-201ENST00000375425 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.02
NELFE-201ENST00000375425 NCOA3Q9Y6Q9 1424 aa21.37■■□□□ 1.01
NELFE-201ENST00000375425 DIP2AQ14689 1571 aa21.37■■□□□ 1.01
NELFE-201ENST00000375425 C19orf44Q9H6X5 657 aa21.37■■□□□ 1.01
NELFE-201ENST00000375425 PTPRUQ92729 1446 aa21.36■■□□□ 1.01
NELFE-201ENST00000375425 TRPM2O94759 1503 aa21.35■■□□□ 1.01
NELFE-201ENST00000375425 CADPS2Q86UW7 1296 aa21.33■■□□□ 1.01
NELFE-201ENST00000375425 CLTCL1P53675 1640 aa21.33■■□□□ 1
NELFE-201ENST00000375425 ROBO1Q9Y6N7 1651 aa21.32■■□□□ 1
NELFE-201ENST00000375425 ATF3P18847 181 aa21.32■■□□□ 1
NELFE-201ENST00000375425 METP08581 1390 aa21.31■■□□□ 1
NELFE-201ENST00000375425 FOXD1Q16676 465 aa21.31■■□□□ 1
NELFE-201ENST00000375425 VGFO15240 615 aaPredicted RBP21.29■■□□□ 1
NELFE-201ENST00000375425 SETBP1Q9Y6X0 1596 aa21.29■■□□□ 1
NELFE-201ENST00000375425 NRXN3Q9Y4C0 1643 aa21.29■■□□□ 1
NELFE-201ENST00000375425 NEXMIFQ5QGS0 1516 aa21.28■■□□□ 1
NELFE-201ENST00000375425 RGS17Q9UGC6 210 aaPredicted RBP21.27■■□□□ 1
NELFE-201ENST00000375425 RPGRIP1LQ68CZ1 1315 aa21.27■□□□□ 0.99
NELFE-201ENST00000375425 MPHOSPH9Q99550 1183 aa21.26■□□□□ 0.99
NELFE-201ENST00000375425 KIF1BO60333 1816 aa21.24■□□□□ 0.99
NELFE-201ENST00000375425 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.24■□□□□ 0.99
NELFE-201ENST00000375425 JCADQ9P266 1359 aa21.21■□□□□ 0.99
NELFE-201ENST00000375425 BRINP3Q76B58 766 aa21.21■□□□□ 0.99
NELFE-201ENST00000375425 RGL3Q3MIN7 710 aa21.2■□□□□ 0.98
NELFE-201ENST00000375425 XRN1Q8IZH2 1706 aaKnown RBP21.2■□□□□ 0.98
NELFE-201ENST00000375425 DCCP43146 1447 aa21.18■□□□□ 0.98
NELFE-201ENST00000375425 PHLPP1O60346 1717 aa21.18■□□□□ 0.98
NELFE-201ENST00000375425 CCDC144AA2RUR9 1427 aa21.17■□□□□ 0.98
NELFE-201ENST00000375425 ACIN1Q9UKV3 1341 aaKnown RBP21.15■□□□□ 0.98
NELFE-201ENST00000375425 SETD5Q9C0A6 1442 aa21.15■□□□□ 0.98
NELFE-201ENST00000375425 POTEAQ6S8J7 498 aa21.14■□□□□ 0.98
NELFE-201ENST00000375425 ADGRF5Q8IZF2 1346 aa21.14■□□□□ 0.97
NELFE-201ENST00000375425 MST1RQ04912 1400 aa21.13■□□□□ 0.97
NELFE-201ENST00000375425 ADGRL3Q9HAR2 1447 aa21.13■□□□□ 0.97
NELFE-201ENST00000375425 ROBO2Q9HCK4 1378 aa21.13■□□□□ 0.97
NELFE-201ENST00000375425 COL16A1Q07092 1604 aaPredicted RBP21.13■□□□□ 0.97
NELFE-201ENST00000375425 SPATA31A6Q5VVP1 1343 aa21.12■□□□□ 0.97
NELFE-201ENST00000375425 SPATA31E1Q6ZUB1 1445 aa21.11■□□□□ 0.97
NELFE-201ENST00000375425 AHDC1Q5TGY3 1603 aaPredicted RBP21.11■□□□□ 0.97
NELFE-201ENST00000375425 PTCH1Q13635 1447 aa21.1■□□□□ 0.97
NELFE-201ENST00000375425 ANKRD30BQ9BXX2 1392 aa21.09■□□□□ 0.97
NELFE-201ENST00000375425 DDX17Q92841 729 aaKnown RBP21.09■□□□□ 0.97
NELFE-201ENST00000375425 PPLO60437 1756 aa21.09■□□□□ 0.97
NELFE-201ENST00000375425 ASXL1Q8IXJ9 1541 aa21.08■□□□□ 0.97
NELFE-201ENST00000375425 RAB3GAP2Q9H2M9 1393 aa21.07■□□□□ 0.96
NELFE-201ENST00000375425 MEX3CQ5U5Q3 659 aaKnown RBP21.07■□□□□ 0.96
NELFE-201ENST00000375425 LRRC59Q96AG4 307 aaKnown RBP21.07■□□□□ 0.96
NELFE-201ENST00000375425 SETD1AO15047 1707 aaKnown RBP21.07■□□□□ 0.96
NELFE-201ENST00000375425 PRAG1Q86YV5 1406 aa21.05■□□□□ 0.96
NELFE-201ENST00000375425 STK26Q9P289 416 aa21.05■□□□□ 0.96
NELFE-201ENST00000375425 C1orf167Q5SNV9 1468 aa21.04■□□□□ 0.96
NELFE-201ENST00000375425 NUTM2BA6NNL0 878 aaPredicted RBP21.04■□□□□ 0.96
NELFE-201ENST00000375425 NUTM2EB1AL46 878 aaPredicted RBP21.04■□□□□ 0.96
NELFE-201ENST00000375425 TMEM132EQ6IEE7 984 aa21.04■□□□□ 0.96
NELFE-201ENST00000375425 NUTM2AQ8IVF1 878 aaPredicted RBP21.04■□□□□ 0.96
NELFE-201ENST00000375425 ORAI2Q96SN7 254 aa21.04■□□□□ 0.96
NELFE-201ENST00000375425 LRP6O75581 1613 aa21.04■□□□□ 0.96
NELFE-201ENST00000375425 NALCNQ8IZF0 1738 aa21.04■□□□□ 0.96
NELFE-201ENST00000375425 WAPLQ7Z5K2 1190 aa21.03■□□□□ 0.96
NELFE-201ENST00000375425 LRPPRCP42704 1394 aaKnown RBP21■□□□□ 0.95
NELFE-201ENST00000375425 PIK3C2GO75747 1445 aa20.99■□□□□ 0.95
NELFE-201ENST00000375425 ZNF772Q68DY9 489 aaPredicted RBP20.99■□□□□ 0.95
NELFE-201ENST00000375425 ABCC11Q96J66 1382 aa20.99■□□□□ 0.95
NELFE-201ENST00000375425 SHPRHQ149N8 1683 aa20.98■□□□□ 0.95
NELFE-201ENST00000375425 C14orf93Q9H972 538 aaKnown RBP20.98■□□□□ 0.95
NELFE-201ENST00000375425 NHSL1Q5SYE7 1610 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms