RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 RIMBP3CA6NJZ7 1639 aa11.1□□□□□ -0.63
UBR4-202ENST00000375224 RIMBP3BA6NNM3 1639 aa11.1□□□□□ -0.63
UBR4-202ENST00000375224 RIMBP3Q9UFD9 1639 aa11.1□□□□□ -0.63
UBR4-202ENST00000375224 GGT6Q6P531 493 aa11.1□□□□□ -0.63
UBR4-202ENST00000375224 FKBP8Q14318 412 aa11.1□□□□□ -0.63
UBR4-202ENST00000375224 DIP2CQ9Y2E4 1556 aa11.1□□□□□ -0.63
UBR4-202ENST00000375224 ABCC3O15438 1527 aa11.09□□□□□ -0.63
UBR4-202ENST00000375224 IFT172Q9UG01 1749 aa11.09□□□□□ -0.63
UBR4-202ENST00000375224 PODXL2Q9NZ53 605 aa11.09□□□□□ -0.63
UBR4-202ENST00000375224 DISP3Q9P2K9 1392 aa11.09□□□□□ -0.63
UBR4-202ENST00000375224 PLEKHG5O94827 1062 aa11.09□□□□□ -0.63
UBR4-202ENST00000375224 RAPGEF3O95398 923 aa11.09□□□□□ -0.63
UBR4-202ENST00000375224 PKNOX2Q96KN3 472 aa11.09□□□□□ -0.63
UBR4-202ENST00000375224 SALL2Q9Y467 1007 aaPredicted RBP11.09□□□□□ -0.63
UBR4-202ENST00000375224 NPATQ14207 1427 aa11.09□□□□□ -0.63
UBR4-202ENST00000375224 RPGRIP1LQ68CZ1 1315 aa11.08□□□□□ -0.64
UBR4-202ENST00000375224 ZC3H13Q5T200 1668 aaKnown RBP11.08□□□□□ -0.64
UBR4-202ENST00000375224 ADGRB3O60242 1522 aa11.08□□□□□ -0.64
UBR4-202ENST00000375224 UGGT1Q9NYU2 1555 aa11.07□□□□□ -0.64
UBR4-202ENST00000375224 CAMSAP1Q5T5Y3 1602 aa11.07□□□□□ -0.64
UBR4-202ENST00000375224 PARD3Q8TEW0 1356 aa11.07□□□□□ -0.64
UBR4-202ENST00000375224 PER1O15534 1290 aaPredicted RBP11.07□□□□□ -0.64
UBR4-202ENST00000375224 NRXN1Q9ULB1 1477 aa11.07□□□□□ -0.64
UBR4-202ENST00000375224 ERICH6BQ5W0A0 696 aa11.07□□□□□ -0.64
UBR4-202ENST00000375224 NLRP13Q86W25 1043 aa11.07□□□□□ -0.64
UBR4-202ENST00000375224 PNISRQ8TF01 805 aaKnown RBP11.07□□□□□ -0.64
UBR4-202ENST00000375224 ARHGAP31Q2M1Z3 1444 aa11.06□□□□□ -0.64
UBR4-202ENST00000375224 CNGB1Q14028 1251 aaPredicted RBP11.06□□□□□ -0.64
UBR4-202ENST00000375224 MROH2AA6NES4 1674 aa11.06□□□□□ -0.64
UBR4-202ENST00000375224 ZMYM4Q5VZL5 1548 aa11.05□□□□□ -0.64
UBR4-202ENST00000375224 PANK3Q9H999 370 aa11.05□□□□□ -0.64
UBR4-202ENST00000375224 DIP2BQ9P265 1576 aa11.05□□□□□ -0.64
UBR4-202ENST00000375224 FAM69CQ0P6D2 419 aa11.05□□□□□ -0.64
UBR4-202ENST00000375224 NOS1P29475 1434 aa11.05□□□□□ -0.64
UBR4-202ENST00000375224 SETBP1Q9Y6X0 1596 aa11.05□□□□□ -0.64
UBR4-202ENST00000375224 SYNMO15061 1565 aa11.04□□□□□ -0.64
UBR4-202ENST00000375224 CHGAP10645 457 aaKnown RBP11.04□□□□□ -0.64
UBR4-202ENST00000375224 ADGRF5Q8IZF2 1346 aa11.04□□□□□ -0.64
UBR4-202ENST00000375224 PPLO60437 1756 aa11.03□□□□□ -0.64
UBR4-202ENST00000375224 LRPPRCP42704 1394 aaKnown RBP11.03□□□□□ -0.64
UBR4-202ENST00000375224 CFAP65Q6ZU64 1925 aaKnown RBP11.03□□□□□ -0.64
UBR4-202ENST00000375224 CFAP70Q5T0N1 1121 aa11.03□□□□□ -0.64
UBR4-202ENST00000375224 KNSTRNQ9Y448 316 aa11.02□□□□□ -0.65
UBR4-202ENST00000375224 KDM5AP29375 1690 aaKnown RBP11.02□□□□□ -0.65
UBR4-202ENST00000375224 INSRP06213 1382 aa11.02□□□□□ -0.65
UBR4-202ENST00000375224 PIK3C2BO00750 1634 aa11.02□□□□□ -0.65
UBR4-202ENST00000375224 SLC52A1Q9NWF4 448 aa11.01□□□□□ -0.65
UBR4-202ENST00000375224 YEATS2Q9ULM3 1422 aa11.01□□□□□ -0.65
UBR4-202ENST00000375224 SBNO2Q9Y2G9 1366 aa11.01□□□□□ -0.65
UBR4-202ENST00000375224 MYO3AQ8NEV4 1616 aa11.01□□□□□ -0.65
UBR4-202ENST00000375224 PPP6R1Q9UPN7 881 aa11.01□□□□□ -0.65
UBR4-202ENST00000375224 REREQ9P2R6 1566 aa11□□□□□ -0.65
UBR4-202ENST00000375224 PIK3C2GO75747 1445 aa11□□□□□ -0.65
UBR4-202ENST00000375224 SMG6Q86US8 1419 aaKnown RBP11□□□□□ -0.65
UBR4-202ENST00000375224 VGFO15240 615 aaPredicted RBP11□□□□□ -0.65
UBR4-202ENST00000375224 DEKP35659 375 aaKnown RBP11□□□□□ -0.65
UBR4-202ENST00000375224 C14orf93Q9H972 538 aaKnown RBP11□□□□□ -0.65
UBR4-202ENST00000375224 NPC1L1Q9UHC9 1359 aa10.99□□□□□ -0.65
UBR4-202ENST00000375224 SIGLEC1Q9BZZ2 1709 aa10.99□□□□□ -0.65
UBR4-202ENST00000375224 CC2D1BQ5T0F9 858 aaKnown RBP10.99□□□□□ -0.65
UBR4-202ENST00000375224 BCANQ96GW7 911 aa10.99□□□□□ -0.65
UBR4-202ENST00000375224 NUDCQ9Y266 331 aa10.98□□□□□ -0.65
UBR4-202ENST00000375224 AGLP35573 1532 aa10.98□□□□□ -0.65
UBR4-202ENST00000375224 CENPJQ9HC77 1338 aaPredicted RBP10.98□□□□□ -0.65
UBR4-202ENST00000375224 ASXL1Q8IXJ9 1541 aa10.98□□□□□ -0.65
UBR4-202ENST00000375224 TSPOAP1O95153 1857 aa10.98□□□□□ -0.65
UBR4-202ENST00000375224 ZFYVE9O95405 1425 aa10.97□□□□□ -0.65
UBR4-202ENST00000375224 MYOM1P52179 1685 aa10.97□□□□□ -0.65
UBR4-202ENST00000375224 ERVK-7P63135 1459 aa10.97□□□□□ -0.65
UBR4-202ENST00000375224 PREX1Q8TCU6 1659 aa10.96□□□□□ -0.65
UBR4-202ENST00000375224 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.96□□□□□ -0.65
UBR4-202ENST00000375224 NEXMIFQ5QGS0 1516 aa10.96□□□□□ -0.65
UBR4-202ENST00000375224 PDE3BQ13370 1112 aa10.96□□□□□ -0.66
UBR4-202ENST00000375224 ADGRB1O14514 1584 aa10.95□□□□□ -0.66
UBR4-202ENST00000375224 IDI1Q13907 227 aa10.95□□□□□ -0.66
UBR4-202ENST00000375224 AMER1Q5JTC6 1135 aaPredicted RBP10.95□□□□□ -0.66
UBR4-202ENST00000375224 PUS7Q96PZ0 661 aaKnown RBP10.94□□□□□ -0.66
UBR4-202ENST00000375224 QRICH2Q9H0J4 1663 aa10.93□□□□□ -0.66
UBR4-202ENST00000375224 PPP4R2Q9NY27 417 aa10.93□□□□□ -0.66
UBR4-202ENST00000375224 TRAK1Q9UPV9 953 aa10.93□□□□□ -0.66
UBR4-202ENST00000375224 RBM19Q9Y4C8 960 aaKnown RBP10.93□□□□□ -0.66
UBR4-202ENST00000375224 PPP2R1AP30153 589 aa10.92□□□□□ -0.66
UBR4-202ENST00000375224 BLMP54132 1417 aaPredicted RBP10.92□□□□□ -0.66
UBR4-202ENST00000375224 TMEM131LA2VDJ0 1609 aa10.92□□□□□ -0.66
UBR4-202ENST00000375224 KIF13AQ9H1H9 1805 aa10.9□□□□□ -0.66
UBR4-202ENST00000375224 WDR43Q15061 677 aaKnown RBP eCLIP10.9□□□□□ -0.66
UBR4-202ENST00000375224 RNF123Q5XPI4 1314 aa10.9□□□□□ -0.66
UBR4-202ENST00000375224 EVC2Q86UK5 1308 aa10.9□□□□□ -0.66
UBR4-202ENST00000375224 TMEM132EQ6IEE7 984 aa10.9□□□□□ -0.66
UBR4-202ENST00000375224 ARHGEF40Q8TER5 1519 aa10.9□□□□□ -0.67
UBR4-202ENST00000375224 IRX6P78412 446 aaPredicted RBP10.89□□□□□ -0.67
UBR4-202ENST00000375224 MYO5BQ9ULV0 1848 aa10.89□□□□□ -0.67
UBR4-202ENST00000375224 ARHGEF28Q8N1W1 1705 aaKnown RBP10.89□□□□□ -0.67
UBR4-202ENST00000375224 STAG3Q9UJ98 1225 aa10.89□□□□□ -0.67
UBR4-202ENST00000375224 CLTCQ00610 1675 aaKnown RBP10.88□□□□□ -0.67
UBR4-202ENST00000375224 GLIPR1L2Q4G1C9 344 aa10.88□□□□□ -0.67
UBR4-202ENST00000375224 SPATA31D1Q6ZQQ2 1576 aa10.87□□□□□ -0.67
UBR4-202ENST00000375224 ESF1Q9H501 851 aaKnown RBP10.87□□□□□ -0.67
UBR4-202ENST00000375224 NUTM2DQ5VT03 806 aaPredicted RBP10.86□□□□□ -0.67
UBR4-202ENST00000375224 FBXO31Q5XUX0 539 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms