RNA–Protein interactions for RNA: ENST00000374737.8

VSIG4-201, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG4, Length 1,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-201ENST00000374737 TMEM2Q9UHN6 1383 aa13.03□□□□□ -0.32
VSIG4-201ENST00000374737 PPP1R15AO75807 674 aaPredicted RBP13.03□□□□□ -0.32
VSIG4-201ENST00000374737 EID1Q9Y6B2 187 aa13.02□□□□□ -0.32
VSIG4-201ENST00000374737 NCKAP5LQ9HCH0 1330 aa13.02□□□□□ -0.32
VSIG4-201ENST00000374737 RIMS2Q9UQ26 1411 aa13.02□□□□□ -0.33
VSIG4-201ENST00000374737 ANKLE2Q86XL3 938 aa13.02□□□□□ -0.33
VSIG4-201ENST00000374737 BCANQ96GW7 911 aa13.02□□□□□ -0.33
VSIG4-201ENST00000374737 RPGRIP1LQ68CZ1 1315 aa13.02□□□□□ -0.33
VSIG4-201ENST00000374737 HDGFP51858 240 aaKnown RBP13.01□□□□□ -0.33
VSIG4-201ENST00000374737 ADGRF5Q8IZF2 1346 aa13.01□□□□□ -0.33
VSIG4-201ENST00000374737 ZNF142P52746 1687 aaPredicted RBP13.01□□□□□ -0.33
VSIG4-201ENST00000374737 VGFO15240 615 aaPredicted RBP13□□□□□ -0.33
VSIG4-201ENST00000374737 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.99□□□□□ -0.33
VSIG4-201ENST00000374737 ZFYVE9O95405 1425 aa12.99□□□□□ -0.33
VSIG4-201ENST00000374737 NEXMIFQ5QGS0 1516 aa12.98□□□□□ -0.33
VSIG4-201ENST00000374737 KDM5AP29375 1690 aaKnown RBP12.98□□□□□ -0.33
VSIG4-201ENST00000374737 ARHGAP23Q9P227 1491 aa12.98□□□□□ -0.33
VSIG4-201ENST00000374737 TIMELESSQ9UNS1 1208 aa12.97□□□□□ -0.33
VSIG4-201ENST00000374737 SLIT1O75093 1534 aa12.97□□□□□ -0.33
VSIG4-201ENST00000374737 NEURL4Q96JN8 1562 aa12.97□□□□□ -0.33
VSIG4-201ENST00000374737 SLC26A8Q96RN1 970 aa12.97□□□□□ -0.33
VSIG4-201ENST00000374737 NBPF8Q3BBV2 869 aa12.96□□□□□ -0.33
VSIG4-201ENST00000374737 SCAF11Q99590 1463 aaKnown RBP12.95□□□□□ -0.34
VSIG4-201ENST00000374737 PPLO60437 1756 aa12.95□□□□□ -0.34
VSIG4-201ENST00000374737 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
VSIG4-201ENST00000374737 STAC3Q96MF2 364 aa12.93□□□□□ -0.34
VSIG4-201ENST00000374737 IFT172Q9UG01 1749 aa12.93□□□□□ -0.34
VSIG4-201ENST00000374737 PLEKHG1Q9ULL1 1385 aa12.92□□□□□ -0.34
VSIG4-201ENST00000374737 NBPF1Q3BBV0 1214 aa12.92□□□□□ -0.34
VSIG4-201ENST00000374737 TMEM132EQ6IEE7 984 aa12.92□□□□□ -0.34
VSIG4-201ENST00000374737 MYOM2P54296 1465 aa12.92□□□□□ -0.34
VSIG4-201ENST00000374737 NPHP4O75161 1426 aaPredicted RBP12.91□□□□□ -0.34
VSIG4-201ENST00000374737 PRAG1Q86YV5 1406 aa12.91□□□□□ -0.34
VSIG4-201ENST00000374737 C14orf93Q9H972 538 aaKnown RBP12.9□□□□□ -0.34
VSIG4-201ENST00000374737 PIK3C2GO75747 1445 aa12.9□□□□□ -0.34
VSIG4-201ENST00000374737 STRCQ7RTU9 1775 aa12.9□□□□□ -0.34
VSIG4-201ENST00000374737 NRXN1Q9ULB1 1477 aa12.89□□□□□ -0.35
VSIG4-201ENST00000374737 ZEB1P37275 1124 aaPredicted RBP12.89□□□□□ -0.35
VSIG4-201ENST00000374737 ADAMTS13Q76LX8 1427 aa12.88□□□□□ -0.35
VSIG4-201ENST00000374737 TBX22Q9Y458 520 aa12.88□□□□□ -0.35
VSIG4-201ENST00000374737 MED14O60244 1454 aa12.88□□□□□ -0.35
VSIG4-201ENST00000374737 METP08581 1390 aa12.88□□□□□ -0.35
VSIG4-201ENST00000374737 POLR1AO95602 1720 aaPredicted RBP12.88□□□□□ -0.35
VSIG4-201ENST00000374737 STK26Q9P289 416 aa12.88□□□□□ -0.35
VSIG4-201ENST00000374737 DMRT2Q9Y5R5 561 aa12.87□□□□□ -0.35
VSIG4-201ENST00000374737 ALKQ9UM73 1620 aa12.87□□□□□ -0.35
VSIG4-201ENST00000374737 NRXN3Q9Y4C0 1643 aa12.87□□□□□ -0.35
VSIG4-201ENST00000374737 IQGAP1P46940 1657 aa12.86□□□□□ -0.35
VSIG4-201ENST00000374737 ROCK2O75116 1388 aaKnown RBP12.86□□□□□ -0.35
VSIG4-201ENST00000374737 SETBP1Q9Y6X0 1596 aa12.86□□□□□ -0.35
VSIG4-201ENST00000374737 CARD11Q9BXL7 1154 aa12.85□□□□□ -0.35
VSIG4-201ENST00000374737 TRAK1Q9UPV9 953 aa12.84□□□□□ -0.35
VSIG4-201ENST00000374737 AMOTL2Q9Y2J4 779 aa12.84□□□□□ -0.35
VSIG4-201ENST00000374737 ZNF335Q9H4Z2 1342 aaPredicted RBP12.82□□□□□ -0.36
VSIG4-201ENST00000374737 KCNA6P17658 529 aa12.82□□□□□ -0.36
VSIG4-201ENST00000374737 RBM33Q96EV2 1170 aaKnown RBP12.82□□□□□ -0.36
VSIG4-201ENST00000374737 TRPM1Q7Z4N2 1603 aa12.82□□□□□ -0.36
VSIG4-201ENST00000374737 PTPRUQ92729 1446 aa12.81□□□□□ -0.36
VSIG4-201ENST00000374737 RALGAPBQ86X10 1494 aa12.81□□□□□ -0.36
VSIG4-201ENST00000374737 ASXL1Q8IXJ9 1541 aa12.8□□□□□ -0.36
VSIG4-201ENST00000374737 YTHDC2Q9H6S0 1430 aaKnown RBP12.8□□□□□ -0.36
VSIG4-201ENST00000374737 SAFB2Q14151 953 aaKnown RBP eCLIP12.8□□□□□ -0.36
VSIG4-201ENST00000374737 WAPLQ7Z5K2 1190 aa12.8□□□□□ -0.36
VSIG4-201ENST00000374737 ADGRB1O14514 1584 aa12.8□□□□□ -0.36
VSIG4-201ENST00000374737 SETD1AO15047 1707 aaKnown RBP12.8□□□□□ -0.36
VSIG4-201ENST00000374737 HIRIP3Q9BW71 556 aaPredicted RBP12.79□□□□□ -0.36
VSIG4-201ENST00000374737 DIP2AQ14689 1571 aa12.79□□□□□ -0.36
VSIG4-201ENST00000374737 LAMC1P11047 1609 aa12.78□□□□□ -0.36
VSIG4-201ENST00000374737 LRPPRCP42704 1394 aaKnown RBP12.78□□□□□ -0.36
VSIG4-201ENST00000374737 KIAA1210Q9ULL0 1709 aa12.78□□□□□ -0.36
VSIG4-201ENST00000374737 PRAM1Q96QH2 718 aa12.78□□□□□ -0.36
VSIG4-201ENST00000374737 GPRASP1Q5JY77 1395 aa12.78□□□□□ -0.36
VSIG4-201ENST00000374737 PIK3R4Q99570 1358 aa12.78□□□□□ -0.36
VSIG4-201ENST00000374737 PROSER2Q86WR7 435 aaPredicted RBP12.77□□□□□ -0.37
VSIG4-201ENST00000374737 POGKQ9P215 609 aa12.77□□□□□ -0.37
VSIG4-201ENST00000374737 ABCC11Q96J66 1382 aa12.77□□□□□ -0.37
VSIG4-201ENST00000374737 ROBO2Q9HCK4 1378 aa12.77□□□□□ -0.37
VSIG4-201ENST00000374737 ST20-MTHFSA0A0A6YYL1 179 aa12.76□□□□□ -0.37
VSIG4-201ENST00000374737 PLEKHH1Q9ULM0 1364 aa12.76□□□□□ -0.37
VSIG4-201ENST00000374737 USP47Q96K76 1375 aa12.75□□□□□ -0.37
VSIG4-201ENST00000374737 CHD2O14647 1828 aaKnown RBP12.74□□□□□ -0.37
VSIG4-201ENST00000374737 HSPA5P11021 654 aaKnown RBP12.74□□□□□ -0.37
VSIG4-201ENST00000374737 EIF4G2P78344 907 aaKnown RBP eCLIP12.74□□□□□ -0.37
VSIG4-201ENST00000374737 C14orf37Q86TY3 774 aa12.74□□□□□ -0.37
VSIG4-201ENST00000374737 STRCP1A6NGW2 1772 aa12.73□□□□□ -0.37
VSIG4-201ENST00000374737 MINK1Q8N4C8 1332 aaPredicted RBP12.73□□□□□ -0.37
VSIG4-201ENST00000374737 CENPJQ9HC77 1338 aaPredicted RBP12.73□□□□□ -0.37
VSIG4-201ENST00000374737 SIRT1Q96EB6 747 aa12.72□□□□□ -0.37
VSIG4-201ENST00000374737 TECPR2O15040 1411 aa12.71□□□□□ -0.37
VSIG4-201ENST00000374737 TMEM94Q12767 1356 aa12.71□□□□□ -0.37
VSIG4-201ENST00000374737 EIF3AQ14152 1382 aaKnown RBP12.71□□□□□ -0.37
VSIG4-201ENST00000374737 XRN1Q8IZH2 1706 aaKnown RBP12.71□□□□□ -0.38
VSIG4-201ENST00000374737 NWD1Q149M9 1564 aa12.7□□□□□ -0.38
VSIG4-201ENST00000374737 PTCH1Q13635 1447 aa12.7□□□□□ -0.38
VSIG4-201ENST00000374737 FAM135BQ49AJ0 1406 aa12.7□□□□□ -0.38
VSIG4-201ENST00000374737 ARHGEF28Q8N1W1 1705 aaKnown RBP12.69□□□□□ -0.38
VSIG4-201ENST00000374737 CPS1P31327 1500 aa12.69□□□□□ -0.38
VSIG4-201ENST00000374737 DLC1Q96QB1 1528 aa12.69□□□□□ -0.38
VSIG4-201ENST00000374737 NKTRP30414 1462 aaKnown RBP12.68□□□□□ -0.38
VSIG4-201ENST00000374737 LRRC7Q96NW7 1537 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms