RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 IFT172Q9UG01 1749 aa21.94■■□□□ 1.1
HSPG2-201ENST00000374673 NCKAP5LQ9HCH0 1330 aa21.93■■□□□ 1.1
HSPG2-201ENST00000374673 LTKP29376 864 aa21.92■■□□□ 1.1
HSPG2-201ENST00000374673 TXNDC2Q86VQ3 553 aa21.92■■□□□ 1.1
HSPG2-201ENST00000374673 EID1Q9Y6B2 187 aa21.92■■□□□ 1.1
HSPG2-201ENST00000374673 IQGAP1P46940 1657 aa21.91■■□□□ 1.1
HSPG2-201ENST00000374673 HDGFP51858 240 aaKnown RBP21.91■■□□□ 1.1
HSPG2-201ENST00000374673 ZNF326Q5BKZ1 582 aaKnown RBP21.91■■□□□ 1.1
HSPG2-201ENST00000374673 RPGRIP1LQ68CZ1 1315 aa21.9■■□□□ 1.1
HSPG2-201ENST00000374673 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.9■■□□□ 1.1
HSPG2-201ENST00000374673 NPHP4O75161 1426 aaPredicted RBP21.89■■□□□ 1.1
HSPG2-201ENST00000374673 DMRT2Q9Y5R5 561 aa21.87■■□□□ 1.09
HSPG2-201ENST00000374673 RGL3Q3MIN7 710 aa21.86■■□□□ 1.09
HSPG2-201ENST00000374673 PLEKHG1Q9ULL1 1385 aa21.86■■□□□ 1.09
HSPG2-201ENST00000374673 CLSPNQ9HAW4 1339 aa21.84■■□□□ 1.09
HSPG2-201ENST00000374673 PPP1R15AO75807 674 aaPredicted RBP21.84■■□□□ 1.09
HSPG2-201ENST00000374673 SIN3AQ96ST3 1273 aa21.84■■□□□ 1.09
HSPG2-201ENST00000374673 NUTM2DQ5VT03 806 aaPredicted RBP21.83■■□□□ 1.09
HSPG2-201ENST00000374673 SETBP1Q9Y6X0 1596 aa21.82■■□□□ 1.08
HSPG2-201ENST00000374673 NRXN3Q9Y4C0 1643 aa21.82■■□□□ 1.08
HSPG2-201ENST00000374673 MYOM2P54296 1465 aa21.82■■□□□ 1.08
HSPG2-201ENST00000374673 VGFO15240 615 aaPredicted RBP21.81■■□□□ 1.08
HSPG2-201ENST00000374673 DIP2AQ14689 1571 aa21.8■■□□□ 1.08
HSPG2-201ENST00000374673 NEUROD1Q13562 356 aa21.78■■□□□ 1.08
HSPG2-201ENST00000374673 ADAMTS13Q76LX8 1427 aa21.78■■□□□ 1.08
HSPG2-201ENST00000374673 NRXN1Q9ULB1 1477 aa21.77■■□□□ 1.08
HSPG2-201ENST00000374673 CCER1Q8TC90 406 aaPredicted RBP21.77■■□□□ 1.08
HSPG2-201ENST00000374673 STAC3Q96MF2 364 aa21.77■■□□□ 1.08
HSPG2-201ENST00000374673 SETD1AO15047 1707 aaKnown RBP21.76■■□□□ 1.07
HSPG2-201ENST00000374673 ADGRF5Q8IZF2 1346 aa21.75■■□□□ 1.07
HSPG2-201ENST00000374673 PIK3C2GO75747 1445 aa21.74■■□□□ 1.07
HSPG2-201ENST00000374673 DCAF11Q8TEB1 546 aa21.73■■□□□ 1.07
HSPG2-201ENST00000374673 BCANQ96GW7 911 aa21.73■■□□□ 1.07
HSPG2-201ENST00000374673 ALKQ9UM73 1620 aa21.73■■□□□ 1.07
HSPG2-201ENST00000374673 TBX22Q9Y458 520 aa21.72■■□□□ 1.07
HSPG2-201ENST00000374673 LAMC1P11047 1609 aa21.72■■□□□ 1.07
HSPG2-201ENST00000374673 SLC26A8Q96RN1 970 aa21.71■■□□□ 1.07
HSPG2-201ENST00000374673 CHD2O14647 1828 aaKnown RBP21.71■■□□□ 1.07
HSPG2-201ENST00000374673 L3MBTL2Q969R5 705 aa21.7■■□□□ 1.06
HSPG2-201ENST00000374673 SENP3Q9H4L4 574 aaPredicted RBP21.7■■□□□ 1.06
HSPG2-201ENST00000374673 TONSLQ96HA7 1378 aa21.7■■□□□ 1.06
HSPG2-201ENST00000374673 PIK3R4Q99570 1358 aa21.69■■□□□ 1.06
HSPG2-201ENST00000374673 NWD1Q149M9 1564 aa21.69■■□□□ 1.06
HSPG2-201ENST00000374673 STRCP1A6NGW2 1772 aa21.69■■□□□ 1.06
HSPG2-201ENST00000374673 KDM2AQ9Y2K7 1162 aa21.68■■□□□ 1.06
HSPG2-201ENST00000374673 LTBP4Q8N2S1 1624 aa21.66■■□□□ 1.06
HSPG2-201ENST00000374673 ZNF335Q9H4Z2 1342 aaPredicted RBP21.66■■□□□ 1.06
HSPG2-201ENST00000374673 KIAA1210Q9ULL0 1709 aa21.66■■□□□ 1.06
HSPG2-201ENST00000374673 PRAG1Q86YV5 1406 aa21.65■■□□□ 1.06
HSPG2-201ENST00000374673 XRN1Q8IZH2 1706 aaKnown RBP21.63■■□□□ 1.05
HSPG2-201ENST00000374673 METP08581 1390 aa21.63■■□□□ 1.05
HSPG2-201ENST00000374673 C14orf93Q9H972 538 aaKnown RBP21.63■■□□□ 1.05
HSPG2-201ENST00000374673 CPS1P31327 1500 aa21.63■■□□□ 1.05
HSPG2-201ENST00000374673 ASXL1Q8IXJ9 1541 aa21.63■■□□□ 1.05
HSPG2-201ENST00000374673 KCNA6P17658 529 aa21.62■■□□□ 1.05
HSPG2-201ENST00000374673 TIMELESSQ9UNS1 1208 aa21.62■■□□□ 1.05
HSPG2-201ENST00000374673 PTPRUQ92729 1446 aa21.62■■□□□ 1.05
HSPG2-201ENST00000374673 NKTRP30414 1462 aaKnown RBP21.6■■□□□ 1.05
HSPG2-201ENST00000374673 CFAP70Q5T0N1 1121 aa21.6■■□□□ 1.05
HSPG2-201ENST00000374673 TRPM1Q7Z4N2 1603 aa21.59■■□□□ 1.05
HSPG2-201ENST00000374673 ADGRB1O14514 1584 aa21.59■■□□□ 1.05
HSPG2-201ENST00000374673 KNDC1Q76NI1 1749 aa21.58■■□□□ 1.05
HSPG2-201ENST00000374673 AMOTL2Q9Y2J4 779 aa21.56■■□□□ 1.04
HSPG2-201ENST00000374673 XIRP1Q702N8 1843 aaKnown RBP21.55■■□□□ 1.04
HSPG2-201ENST00000374673 LRRC7Q96NW7 1537 aa21.55■■□□□ 1.04
HSPG2-201ENST00000374673 LRPPRCP42704 1394 aaKnown RBP21.54■■□□□ 1.04
HSPG2-201ENST00000374673 YTHDC2Q9H6S0 1430 aaKnown RBP21.54■■□□□ 1.04
HSPG2-201ENST00000374673 TMEM132EQ6IEE7 984 aa21.53■■□□□ 1.04
HSPG2-201ENST00000374673 TECPR2O15040 1411 aa21.53■■□□□ 1.04
HSPG2-201ENST00000374673 PTCH1Q13635 1447 aa21.53■■□□□ 1.04
HSPG2-201ENST00000374673 NBPF8Q3BBV2 869 aa21.52■■□□□ 1.04
HSPG2-201ENST00000374673 IQSEC2Q5JU85 1478 aa21.52■■□□□ 1.03
HSPG2-201ENST00000374673 ABCC11Q96J66 1382 aa21.51■■□□□ 1.03
HSPG2-201ENST00000374673 RALGAPBQ86X10 1494 aa21.5■■□□□ 1.03
HSPG2-201ENST00000374673 DLC1Q96QB1 1528 aa21.5■■□□□ 1.03
HSPG2-201ENST00000374673 NCOA3Q9Y6Q9 1424 aa21.47■■□□□ 1.03
HSPG2-201ENST00000374673 ARHGEF28Q8N1W1 1705 aaKnown RBP21.47■■□□□ 1.03
HSPG2-201ENST00000374673 NBPF1Q3BBV0 1214 aa21.47■■□□□ 1.03
HSPG2-201ENST00000374673 PROSER2Q86WR7 435 aaPredicted RBP21.47■■□□□ 1.03
HSPG2-201ENST00000374673 CERKQ8TCT0 537 aa21.47■■□□□ 1.03
HSPG2-201ENST00000374673 TMEM94Q12767 1356 aa21.47■■□□□ 1.03
HSPG2-201ENST00000374673 ROBO2Q9HCK4 1378 aa21.47■■□□□ 1.03
HSPG2-201ENST00000374673 GPRASP1Q5JY77 1395 aa21.46■■□□□ 1.03
HSPG2-201ENST00000374673 STK26Q9P289 416 aa21.45■■□□□ 1.02
HSPG2-201ENST00000374673 ROCK2O75116 1388 aaKnown RBP21.45■■□□□ 1.02
HSPG2-201ENST00000374673 FAM135BQ49AJ0 1406 aa21.45■■□□□ 1.02
HSPG2-201ENST00000374673 SIRT1Q96EB6 747 aa21.44■■□□□ 1.02
HSPG2-201ENST00000374673 NALCNQ8IZF0 1738 aa21.43■■□□□ 1.02
HSPG2-201ENST00000374673 RBM33Q96EV2 1170 aaKnown RBP21.4■■□□□ 1.02
HSPG2-201ENST00000374673 TRAK1Q9UPV9 953 aa21.4■■□□□ 1.02
HSPG2-201ENST00000374673 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.39■■□□□ 1.01
HSPG2-201ENST00000374673 ADGRL3Q9HAR2 1447 aa21.38■■□□□ 1.01
HSPG2-201ENST00000374673 PLEKHH1Q9ULM0 1364 aa21.38■■□□□ 1.01
HSPG2-201ENST00000374673 MSH6P52701 1360 aa21.36■■□□□ 1.01
HSPG2-201ENST00000374673 WAPLQ7Z5K2 1190 aa21.36■■□□□ 1.01
HSPG2-201ENST00000374673 PRAM1Q96QH2 718 aa21.36■■□□□ 1.01
HSPG2-201ENST00000374673 CARD11Q9BXL7 1154 aa21.36■■□□□ 1.01
HSPG2-201ENST00000374673 DCCP43146 1447 aa21.36■■□□□ 1.01
HSPG2-201ENST00000374673 C14orf37Q86TY3 774 aa21.34■■□□□ 1.01
HSPG2-201ENST00000374673 C19orf44Q9H6X5 657 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms