RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 MYOM2P54296 1465 aa18.42■□□□□ 0.54
GJB1-202ENST00000374022 SLIT1O75093 1534 aa18.42■□□□□ 0.54
GJB1-202ENST00000374022 TMEM2Q9UHN6 1383 aa18.41■□□□□ 0.54
GJB1-202ENST00000374022 ZFYVE9O95405 1425 aa18.41■□□□□ 0.54
GJB1-202ENST00000374022 RIMS2Q9UQ26 1411 aa18.41■□□□□ 0.54
GJB1-202ENST00000374022 ARHGAP23Q9P227 1491 aa18.41■□□□□ 0.54
GJB1-202ENST00000374022 THEMISQ8N1K5 641 aaPredicted RBP18.41■□□□□ 0.54
GJB1-202ENST00000374022 KDM2AQ9Y2K7 1162 aa18.4■□□□□ 0.54
GJB1-202ENST00000374022 LMTK3Q96Q04 1460 aa18.38■□□□□ 0.53
GJB1-202ENST00000374022 POLR1AO95602 1720 aaPredicted RBP18.38■□□□□ 0.53
GJB1-202ENST00000374022 PPP1R15AO75807 674 aaPredicted RBP18.38■□□□□ 0.53
GJB1-202ENST00000374022 STAC3Q96MF2 364 aa18.37■□□□□ 0.53
GJB1-202ENST00000374022 NRXN1Q9ULB1 1477 aa18.37■□□□□ 0.53
GJB1-202ENST00000374022 PRAG1Q86YV5 1406 aa18.37■□□□□ 0.53
GJB1-202ENST00000374022 NUTM2DQ5VT03 806 aaPredicted RBP18.36■□□□□ 0.53
GJB1-202ENST00000374022 TRPM1Q7Z4N2 1603 aa18.36■□□□□ 0.53
GJB1-202ENST00000374022 ADGRF5Q8IZF2 1346 aa18.35■□□□□ 0.53
GJB1-202ENST00000374022 VGFO15240 615 aaPredicted RBP18.35■□□□□ 0.53
GJB1-202ENST00000374022 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.35■□□□□ 0.53
GJB1-202ENST00000374022 KIAA1210Q9ULL0 1709 aa18.34■□□□□ 0.53
GJB1-202ENST00000374022 HDGFP51858 240 aaKnown RBP18.34■□□□□ 0.53
GJB1-202ENST00000374022 SCAF11Q99590 1463 aaKnown RBP18.34■□□□□ 0.53
GJB1-202ENST00000374022 IQGAP1P46940 1657 aa18.34■□□□□ 0.53
GJB1-202ENST00000374022 PIK3C2GO75747 1445 aa18.34■□□□□ 0.53
GJB1-202ENST00000374022 LAMC1P11047 1609 aa18.33■□□□□ 0.52
GJB1-202ENST00000374022 NBPF8Q3BBV2 869 aa18.33■□□□□ 0.52
GJB1-202ENST00000374022 NRXN3Q9Y4C0 1643 aa18.32■□□□□ 0.52
GJB1-202ENST00000374022 EID1Q9Y6B2 187 aa18.32■□□□□ 0.52
GJB1-202ENST00000374022 LTKP29376 864 aa18.31■□□□□ 0.52
GJB1-202ENST00000374022 TXNDC2Q86VQ3 553 aa18.31■□□□□ 0.52
GJB1-202ENST00000374022 MYT1Q01538 1121 aa18.31■□□□□ 0.52
GJB1-202ENST00000374022 SETBP1Q9Y6X0 1596 aa18.31■□□□□ 0.52
GJB1-202ENST00000374022 SETD1AO15047 1707 aaKnown RBP18.3■□□□□ 0.52
GJB1-202ENST00000374022 RALGAPBQ86X10 1494 aa18.3■□□□□ 0.52
GJB1-202ENST00000374022 PLEKHG1Q9ULL1 1385 aa18.29■□□□□ 0.52
GJB1-202ENST00000374022 ANKLE2Q86XL3 938 aa18.29■□□□□ 0.52
GJB1-202ENST00000374022 HSPA2P54652 639 aa18.28■□□□□ 0.52
GJB1-202ENST00000374022 ALKQ9UM73 1620 aa18.27■□□□□ 0.52
GJB1-202ENST00000374022 STRCQ7RTU9 1775 aa18.27■□□□□ 0.52
GJB1-202ENST00000374022 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.51
GJB1-202ENST00000374022 MED14O60244 1454 aa18.25■□□□□ 0.51
GJB1-202ENST00000374022 DIP2AQ14689 1571 aa18.25■□□□□ 0.51
GJB1-202ENST00000374022 CFAP70Q5T0N1 1121 aa18.24■□□□□ 0.51
GJB1-202ENST00000374022 ROCK2O75116 1388 aaKnown RBP18.23■□□□□ 0.51
GJB1-202ENST00000374022 C14orf93Q9H972 538 aaKnown RBP18.23■□□□□ 0.51
GJB1-202ENST00000374022 ASXL1Q8IXJ9 1541 aa18.23■□□□□ 0.51
GJB1-202ENST00000374022 ADAMTS13Q76LX8 1427 aa18.23■□□□□ 0.51
GJB1-202ENST00000374022 NCKAP5LQ9HCH0 1330 aa18.23■□□□□ 0.51
GJB1-202ENST00000374022 BCANQ96GW7 911 aa18.23■□□□□ 0.51
GJB1-202ENST00000374022 NPHP4O75161 1426 aaPredicted RBP18.22■□□□□ 0.51
GJB1-202ENST00000374022 ADGRB1O14514 1584 aa18.22■□□□□ 0.51
GJB1-202ENST00000374022 GPRASP1Q5JY77 1395 aa18.21■□□□□ 0.51
GJB1-202ENST00000374022 NBPF1Q3BBV0 1214 aa18.21■□□□□ 0.51
GJB1-202ENST00000374022 AEBP2Q6ZN18 517 aaPredicted RBP18.2■□□□□ 0.5
GJB1-202ENST00000374022 SLC26A8Q96RN1 970 aa18.17■□□□□ 0.5
GJB1-202ENST00000374022 CARD11Q9BXL7 1154 aa18.17■□□□□ 0.5
GJB1-202ENST00000374022 KNDC1Q76NI1 1749 aa18.16■□□□□ 0.5
GJB1-202ENST00000374022 CHD2O14647 1828 aaKnown RBP18.16■□□□□ 0.5
GJB1-202ENST00000374022 TMEM132EQ6IEE7 984 aa18.16■□□□□ 0.5
GJB1-202ENST00000374022 METP08581 1390 aa18.15■□□□□ 0.5
GJB1-202ENST00000374022 TBX22Q9Y458 520 aa18.15■□□□□ 0.5
GJB1-202ENST00000374022 ARHGEF28Q8N1W1 1705 aaKnown RBP18.15■□□□□ 0.5
GJB1-202ENST00000374022 YTHDC2Q9H6S0 1430 aaKnown RBP18.13■□□□□ 0.49
GJB1-202ENST00000374022 USP47Q96K76 1375 aa18.12■□□□□ 0.49
GJB1-202ENST00000374022 XRN1Q8IZH2 1706 aaKnown RBP18.12■□□□□ 0.49
GJB1-202ENST00000374022 LRPPRCP42704 1394 aaKnown RBP18.11■□□□□ 0.49
GJB1-202ENST00000374022 PIK3R4Q99570 1358 aa18.11■□□□□ 0.49
GJB1-202ENST00000374022 PTPRUQ92729 1446 aa18.1■□□□□ 0.49
GJB1-202ENST00000374022 CPS1P31327 1500 aa18.1■□□□□ 0.49
GJB1-202ENST00000374022 DLC1Q96QB1 1528 aa18.09■□□□□ 0.49
GJB1-202ENST00000374022 NWD1Q149M9 1564 aa18.09■□□□□ 0.49
GJB1-202ENST00000374022 STK26Q9P289 416 aa18.09■□□□□ 0.49
GJB1-202ENST00000374022 EIF4G2P78344 907 aaKnown RBP eCLIP18.08■□□□□ 0.49
GJB1-202ENST00000374022 EIF3AQ14152 1382 aaKnown RBP18.08■□□□□ 0.49
GJB1-202ENST00000374022 TECPR2O15040 1411 aa18.08■□□□□ 0.48
GJB1-202ENST00000374022 QRICH2Q9H0J4 1663 aa18.08■□□□□ 0.48
GJB1-202ENST00000374022 TRAK1Q9UPV9 953 aa18.08■□□□□ 0.48
GJB1-202ENST00000374022 ABCC11Q96J66 1382 aa18.08■□□□□ 0.48
GJB1-202ENST00000374022 STRCP1A6NGW2 1772 aa18.07■□□□□ 0.48
GJB1-202ENST00000374022 HSPA5P11021 654 aaKnown RBP18.06■□□□□ 0.48
GJB1-202ENST00000374022 DMRT2Q9Y5R5 561 aa18.06■□□□□ 0.48
GJB1-202ENST00000374022 AMOTL2Q9Y2J4 779 aa18.04■□□□□ 0.48
GJB1-202ENST00000374022 PTCH1Q13635 1447 aa18.04■□□□□ 0.48
GJB1-202ENST00000374022 ST20-MTHFSA0A0A6YYL1 179 aa18.02■□□□□ 0.48
GJB1-202ENST00000374022 FAM135BQ49AJ0 1406 aa18.02■□□□□ 0.48
GJB1-202ENST00000374022 HIRIP3Q9BW71 556 aaPredicted RBP18.02■□□□□ 0.47
GJB1-202ENST00000374022 ROBO2Q9HCK4 1378 aa18.01■□□□□ 0.47
GJB1-202ENST00000374022 NKTRP30414 1462 aaKnown RBP18.01■□□□□ 0.47
GJB1-202ENST00000374022 CENPJQ9HC77 1338 aaPredicted RBP18.01■□□□□ 0.47
GJB1-202ENST00000374022 KCNA6P17658 529 aa18.01■□□□□ 0.47
GJB1-202ENST00000374022 PRAM1Q96QH2 718 aa18■□□□□ 0.47
GJB1-202ENST00000374022 SIRT1Q96EB6 747 aa17.99■□□□□ 0.47
GJB1-202ENST00000374022 POGKQ9P215 609 aa17.99■□□□□ 0.47
GJB1-202ENST00000374022 PLEKHH1Q9ULM0 1364 aa17.99■□□□□ 0.47
GJB1-202ENST00000374022 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.98■□□□□ 0.47
GJB1-202ENST00000374022 WAPLQ7Z5K2 1190 aa17.98■□□□□ 0.47
GJB1-202ENST00000374022 SBNO2Q9Y2G9 1366 aa17.97■□□□□ 0.47
GJB1-202ENST00000374022 SAFB2Q14151 953 aaKnown RBP eCLIP17.97■□□□□ 0.47
GJB1-202ENST00000374022 NALCNQ8IZF0 1738 aa17.97■□□□□ 0.47
GJB1-202ENST00000374022 TESK2Q96S53 571 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms