RNA–Protein interactions for RNA: ENST00000374001.6

A1CF-205, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene A1CF, Length 9,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-205ENST00000374001 KIAA0556O60303 1618 aa6.56□□□□□ -1.36
A1CF-205ENST00000374001 TRHP20396 242 aaPredicted RBP6.56□□□□□ -1.36
A1CF-205ENST00000374001 ZKSCAN2Q63HK3 967 aa6.56□□□□□ -1.36
A1CF-205ENST00000374001 ZNF428Q96B54 188 aa6.56□□□□□ -1.36
A1CF-205ENST00000374001 SHANK2Q9UPX8 1470 aa6.56□□□□□ -1.36
A1CF-205ENST00000374001 DUOX2Q9NRD8 1548 aa6.56□□□□□ -1.36
A1CF-205ENST00000374001 ABCA5Q8WWZ7 1642 aa6.56□□□□□ -1.36
A1CF-205ENST00000374001 RUNDC1Q96C34 613 aa6.56□□□□□ -1.36
A1CF-205ENST00000374001 AMPHP49418 695 aa6.56□□□□□ -1.36
A1CF-205ENST00000374001 CDK13Q14004 1512 aaKnown RBP6.55□□□□□ -1.36
A1CF-205ENST00000374001 KIF7Q2M1P5 1343 aa6.55□□□□□ -1.36
A1CF-205ENST00000374001 RRP1P56182 461 aaKnown RBP6.55□□□□□ -1.36
A1CF-205ENST00000374001 PPP6R1Q9UPN7 881 aa6.55□□□□□ -1.36
A1CF-205ENST00000374001 MLECQ14165 292 aa6.55□□□□□ -1.36
A1CF-205ENST00000374001 DNMT1P26358 1616 aaKnown RBP6.55□□□□□ -1.36
A1CF-205ENST00000374001 ARHGEF12Q9NZN5 1544 aa6.55□□□□□ -1.36
A1CF-205ENST00000374001 RPRD2Q5VT52 1461 aaKnown RBP6.55□□□□□ -1.36
A1CF-205ENST00000374001 DDX11L8A8MPP1 907 aa6.55□□□□□ -1.36
A1CF-205ENST00000374001 HMGB2P26583 209 aaKnown RBP6.55□□□□□ -1.36
A1CF-205ENST00000374001 REC8O95072 547 aa6.55□□□□□ -1.36
A1CF-205ENST00000374001 SKOR2Q2VWA4 1001 aaPredicted RBP6.54□□□□□ -1.36
A1CF-205ENST00000374001 FAM161AQ3B820 660 aa6.54□□□□□ -1.36
A1CF-205ENST00000374001 NPHP1O15259 732 aa6.54□□□□□ -1.36
A1CF-205ENST00000374001 API5Q9BZZ5 524 aaKnown RBP6.54□□□□□ -1.36
A1CF-205ENST00000374001 ATAD2Q6PL18 1390 aa6.54□□□□□ -1.36
A1CF-205ENST00000374001 FANCIQ9NVI1 1328 aa6.54□□□□□ -1.36
A1CF-205ENST00000374001 SAMD9Q5K651 1589 aa6.54□□□□□ -1.36
A1CF-205ENST00000374001 WDR62O43379 1518 aa6.54□□□□□ -1.36
A1CF-205ENST00000374001 GNAI1P63096 354 aa6.53□□□□□ -1.36
A1CF-205ENST00000374001 NCOA1Q15788 1441 aa6.53□□□□□ -1.36
A1CF-205ENST00000374001 IL27Q8NEV9 243 aa6.53□□□□□ -1.36
A1CF-205ENST00000374001 NUP160Q12769 1436 aa6.53□□□□□ -1.36
A1CF-205ENST00000374001 MSNP26038 577 aaKnown RBP6.53□□□□□ -1.36
A1CF-205ENST00000374001 SAFB2Q14151 953 aaKnown RBP eCLIP6.53□□□□□ -1.36
A1CF-205ENST00000374001 ERBINQ96RT1 1412 aa6.53□□□□□ -1.36
A1CF-205ENST00000374001 DIAPH1O60610 1272 aaKnown RBP6.53□□□□□ -1.36
A1CF-205ENST00000374001 PAK3O75914 559 aaPredicted RBP6.52□□□□□ -1.36
A1CF-205ENST00000374001 HSP90AB4PQ58FF6 505 aa6.52□□□□□ -1.36
A1CF-205ENST00000374001 AEBP2Q6ZN18 517 aaPredicted RBP6.52□□□□□ -1.36
A1CF-205ENST00000374001 TRAK1Q9UPV9 953 aa6.52□□□□□ -1.36
A1CF-205ENST00000374001 A0A0G2JS52 829 aa6.52□□□□□ -1.37
A1CF-205ENST00000374001 EIF4G3O43432 1585 aaKnown RBP6.52□□□□□ -1.37
A1CF-205ENST00000374001 RUFY2Q8WXA3 655 aa6.52□□□□□ -1.37
A1CF-205ENST00000374001 TMX4Q9H1E5 349 aaPredicted RBP6.52□□□□□ -1.37
A1CF-205ENST00000374001 PLB1Q6P1J6 1458 aa6.52□□□□□ -1.37
A1CF-205ENST00000374001 SMG6Q86US8 1419 aaKnown RBP6.52□□□□□ -1.37
A1CF-205ENST00000374001 NEXNQ0ZGT2 675 aa6.52□□□□□ -1.37
A1CF-205ENST00000374001 DNTTIP2Q5QJE6 756 aaKnown RBP6.52□□□□□ -1.37
A1CF-205ENST00000374001 ARHGEF11O15085 1522 aa6.52□□□□□ -1.37
A1CF-205ENST00000374001 NSD2O96028 1365 aa6.52□□□□□ -1.37
A1CF-205ENST00000374001 HSP90B1P14625 803 aaKnown RBP6.52□□□□□ -1.37
A1CF-205ENST00000374001 TPM4P67936 248 aa6.52□□□□□ -1.37
A1CF-205ENST00000374001 ZNF692Q9BU19 519 aaPredicted RBP6.52□□□□□ -1.37
A1CF-205ENST00000374001 DDX58O95786 925 aaKnown RBP6.51□□□□□ -1.37
A1CF-205ENST00000374001 C1orf141Q5JVX7 400 aa6.51□□□□□ -1.37
A1CF-205ENST00000374001 TCOF1Q13428 1488 aaKnown RBP6.51□□□□□ -1.37
A1CF-205ENST00000374001 KIAA2012Q0VF49 1180 aa6.51□□□□□ -1.37
A1CF-205ENST00000374001 PDIA4P13667 645 aaKnown RBP6.51□□□□□ -1.37
A1CF-205ENST00000374001 ADGRL1O94910 1474 aa6.51□□□□□ -1.37
A1CF-205ENST00000374001 PDE3AQ14432 1141 aa6.51□□□□□ -1.37
A1CF-205ENST00000374001 GNL2Q13823 731 aaKnown RBP6.51□□□□□ -1.37
A1CF-205ENST00000374001 ARXQ96QS3 562 aa6.51□□□□□ -1.37
A1CF-205ENST00000374001 CSB-PGBD3P0DP91 1061 aa6.5□□□□□ -1.37
A1CF-205ENST00000374001 ZNF644Q9H582 1327 aaPredicted RBP6.5□□□□□ -1.37
A1CF-205ENST00000374001 TEX14Q8IWB6 1497 aa6.5□□□□□ -1.37
A1CF-205ENST00000374001 ABCC5O15440 1437 aa6.5□□□□□ -1.37
A1CF-205ENST00000374001 TEFQ10587 303 aa6.49□□□□□ -1.37
A1CF-205ENST00000374001 DZIP1LQ8IYY4 767 aaKnown RBP6.49□□□□□ -1.37
A1CF-205ENST00000374001 FAM69CQ0P6D2 419 aa6.49□□□□□ -1.37
A1CF-205ENST00000374001 GPATCH8Q9UKJ3 1502 aaKnown RBP6.49□□□□□ -1.37
A1CF-205ENST00000374001 WDR63Q8IWG1 891 aa6.49□□□□□ -1.37
A1CF-205ENST00000374001 GPRASP1Q5JY77 1395 aa6.49□□□□□ -1.37
A1CF-205ENST00000374001 GORABQ5T7V8 394 aa6.49□□□□□ -1.37
A1CF-205ENST00000374001 RALGAPBQ86X10 1494 aa6.48□□□□□ -1.37
A1CF-205ENST00000374001 THEMISQ8N1K5 641 aaPredicted RBP6.48□□□□□ -1.37
A1CF-205ENST00000374001 ABCC11Q96J66 1382 aa6.48□□□□□ -1.37
A1CF-205ENST00000374001 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.48□□□□□ -1.37
A1CF-205ENST00000374001 GAS2L2Q8NHY3 880 aa6.48□□□□□ -1.37
A1CF-205ENST00000374001 ZNF518AQ6AHZ1 1483 aa6.48□□□□□ -1.37
A1CF-205ENST00000374001 RNF20Q5VTR2 975 aa6.48□□□□□ -1.37
A1CF-205ENST00000374001 FANCAO15360 1455 aa6.48□□□□□ -1.37
A1CF-205ENST00000374001 MCM2P49736 904 aa6.48□□□□□ -1.37
A1CF-205ENST00000374001 TRIM6-TRIM34B2RNG4 842 aa6.47□□□□□ -1.37
A1CF-205ENST00000374001 SCAF11Q99590 1463 aaKnown RBP6.47□□□□□ -1.37
A1CF-205ENST00000374001 CD109Q6YHK3 1445 aa6.47□□□□□ -1.37
A1CF-205ENST00000374001 ZKSCAN1P17029 563 aaPredicted RBP6.47□□□□□ -1.37
A1CF-205ENST00000374001 TAF7LQ5H9L4 462 aa6.47□□□□□ -1.37
A1CF-205ENST00000374001 ERC2O15083 957 aa6.47□□□□□ -1.37
A1CF-205ENST00000374001 ARHGEF5Q12774 1597 aa6.47□□□□□ -1.37
A1CF-205ENST00000374001 TTC5Q8N0Z6 440 aa6.47□□□□□ -1.37
A1CF-205ENST00000374001 KDM5AP29375 1690 aaKnown RBP6.47□□□□□ -1.37
A1CF-205ENST00000374001 CYB5RLQ6IPT4 315 aa6.47□□□□□ -1.37
A1CF-205ENST00000374001 CPLX2Q6PUV4 134 aaKnown RBP6.47□□□□□ -1.37
A1CF-205ENST00000374001 RTEL1-TNFRSF6BF6WH68 1400 aa6.46□□□□□ -1.37
A1CF-205ENST00000374001 POLR1AO95602 1720 aaPredicted RBP6.46□□□□□ -1.38
A1CF-205ENST00000374001 GOLGA6L3A6NEY3 463 aa6.46□□□□□ -1.38
A1CF-205ENST00000374001 RIPK4P57078 832 aa6.46□□□□□ -1.38
A1CF-205ENST00000374001 SHROOM2Q13796 1616 aa6.46□□□□□ -1.38
A1CF-205ENST00000374001 HIP1O00291 1037 aa6.46□□□□□ -1.38
A1CF-205ENST00000374001 PDE4AP27815 886 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms