RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 PHF14O94880 888 aa17.65■□□□□ 0.42
TRAF1-201ENST00000373887 KIF15Q9NS87 1388 aa17.65■□□□□ 0.42
TRAF1-201ENST00000373887 IPO9Q96P70 1041 aaKnown RBP17.64■□□□□ 0.42
TRAF1-201ENST00000373887 ARHGAP5Q13017 1502 aa17.64■□□□□ 0.41
TRAF1-201ENST00000373887 H3BQV1 296 aa17.64■□□□□ 0.41
TRAF1-201ENST00000373887 IFFO2Q5TF58 517 aa17.64■□□□□ 0.41
TRAF1-201ENST00000373887 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.64■□□□□ 0.41
TRAF1-201ENST00000373887 NLRP2Q9NX02 1062 aa17.64■□□□□ 0.41
TRAF1-201ENST00000373887 ZNF592Q92610 1267 aa17.63■□□□□ 0.41
TRAF1-201ENST00000373887 USP47Q96K76 1375 aa17.63■□□□□ 0.41
TRAF1-201ENST00000373887 NUTM2BA6NNL0 878 aaPredicted RBP17.62■□□□□ 0.41
TRAF1-201ENST00000373887 NUTM2EB1AL46 878 aaPredicted RBP17.62■□□□□ 0.41
TRAF1-201ENST00000373887 NUTM2AQ8IVF1 878 aaPredicted RBP17.62■□□□□ 0.41
TRAF1-201ENST00000373887 ESCO1Q5FWF5 840 aa17.62■□□□□ 0.41
TRAF1-201ENST00000373887 MYBBP1AQ9BQG0 1328 aaKnown RBP17.62■□□□□ 0.41
TRAF1-201ENST00000373887 HDAC5Q9UQL6 1122 aa17.61■□□□□ 0.41
TRAF1-201ENST00000373887 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.61■□□□□ 0.41
TRAF1-201ENST00000373887 TSR1Q2NL82 804 aaKnown RBP17.61■□□□□ 0.41
TRAF1-201ENST00000373887 ST18O60284 1047 aa17.61■□□□□ 0.41
TRAF1-201ENST00000373887 DIAPH1O60610 1272 aaKnown RBP17.61■□□□□ 0.41
TRAF1-201ENST00000373887 ZNF771Q7L3S4 317 aaPredicted RBP17.61■□□□□ 0.41
TRAF1-201ENST00000373887 PRG4Q92954 1404 aaPredicted RBP17.6■□□□□ 0.41
TRAF1-201ENST00000373887 GGNBP2Q9H3C7 697 aa17.6■□□□□ 0.41
TRAF1-201ENST00000373887 C9orf78Q9NZ63 289 aaPredicted RBP17.6■□□□□ 0.41
TRAF1-201ENST00000373887 PIP4K2BP78356 416 aa17.6■□□□□ 0.41
TRAF1-201ENST00000373887 STRN4Q9NRL3 753 aa17.59■□□□□ 0.41
TRAF1-201ENST00000373887 SLC4A3P48751 1232 aa17.59■□□□□ 0.41
TRAF1-201ENST00000373887 TXNDC2Q86VQ3 553 aa17.59■□□□□ 0.41
TRAF1-201ENST00000373887 VSIG10Q8N0Z9 540 aa17.59■□□□□ 0.41
TRAF1-201ENST00000373887 GOLGA6L19H0YKK7 550 aa17.58■□□□□ 0.41
TRAF1-201ENST00000373887 AIMP1Q12904 312 aaKnown RBP17.58■□□□□ 0.41
TRAF1-201ENST00000373887 RIPK4P57078 832 aa17.58■□□□□ 0.4
TRAF1-201ENST00000373887 PROSER2Q86WR7 435 aaPredicted RBP17.58■□□□□ 0.4
TRAF1-201ENST00000373887 FAM177BA6PVY3 158 aa17.58■□□□□ 0.4
TRAF1-201ENST00000373887 APAF1O14727 1248 aa17.58■□□□□ 0.4
TRAF1-201ENST00000373887 ANKRD45Q5TZF3 282 aa17.58■□□□□ 0.4
TRAF1-201ENST00000373887 NEXNQ0ZGT2 675 aa17.58■□□□□ 0.4
TRAF1-201ENST00000373887 RAPGEF4Q8WZA2 1011 aa17.57■□□□□ 0.4
TRAF1-201ENST00000373887 FAM184AQ8NB25 1140 aa17.57■□□□□ 0.4
TRAF1-201ENST00000373887 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
TRAF1-201ENST00000373887 PCMTD1Q96MG8 357 aaPredicted RBP17.57■□□□□ 0.4
TRAF1-201ENST00000373887 VPS37DQ86XT2 251 aa17.56■□□□□ 0.4
TRAF1-201ENST00000373887 NLRP6P59044 892 aa17.56■□□□□ 0.4
TRAF1-201ENST00000373887 PPP1R1BQ9UD71 204 aaPredicted RBP17.56■□□□□ 0.4
TRAF1-201ENST00000373887 MCTP1Q6DN14 999 aa17.56■□□□□ 0.4
TRAF1-201ENST00000373887 BECN2A8MW95 431 aa17.55■□□□□ 0.4
TRAF1-201ENST00000373887 TPM2P07951 284 aa17.55■□□□□ 0.4
TRAF1-201ENST00000373887 TRIM34Q9BYJ4 488 aa17.55■□□□□ 0.4
TRAF1-201ENST00000373887 TSHZ2Q9NRE2 1034 aa17.55■□□□□ 0.4
TRAF1-201ENST00000373887 CALRP27797 417 aaKnown RBP17.55■□□□□ 0.4
TRAF1-201ENST00000373887 ZNF428Q96B54 188 aa17.55■□□□□ 0.4
TRAF1-201ENST00000373887 DHX57Q6P158 1386 aaKnown RBP17.55■□□□□ 0.4
TRAF1-201ENST00000373887 MYOM3Q5VTT5 1437 aa17.55■□□□□ 0.4
TRAF1-201ENST00000373887 DDX11L8A8MPP1 907 aa17.55■□□□□ 0.4
TRAF1-201ENST00000373887 DDX49Q9Y6V7 483 aaKnown RBP17.54■□□□□ 0.4
TRAF1-201ENST00000373887 ABTB2Q8N961 1025 aa17.54■□□□□ 0.4
TRAF1-201ENST00000373887 CCDC70Q6NSX1 233 aa17.54■□□□□ 0.4
TRAF1-201ENST00000373887 KIF3AQ9Y496 699 aa17.53■□□□□ 0.4
TRAF1-201ENST00000373887 TPM1P09493 284 aa17.53■□□□□ 0.4
TRAF1-201ENST00000373887 TSPYL4Q9UJ04 414 aa17.52■□□□□ 0.4
TRAF1-201ENST00000373887 AKAP17AQ02040 695 aaKnown RBP17.52■□□□□ 0.4
TRAF1-201ENST00000373887 BCL11BQ9C0K0 894 aaPredicted RBP17.52■□□□□ 0.4
TRAF1-201ENST00000373887 COG6Q9Y2V7 657 aa17.52■□□□□ 0.4
TRAF1-201ENST00000373887 RAPGEF3O95398 923 aa17.52■□□□□ 0.4
TRAF1-201ENST00000373887 GPS2Q13227 327 aa17.52■□□□□ 0.4
TRAF1-201ENST00000373887 FKBP5Q13451 457 aaPredicted RBP17.52■□□□□ 0.39
TRAF1-201ENST00000373887 GRIN2BQ13224 1484 aa17.51■□□□□ 0.39
TRAF1-201ENST00000373887 KRI1Q8N9T8 703 aaKnown RBP17.51■□□□□ 0.39
TRAF1-201ENST00000373887 APPP05067 770 aa17.51■□□□□ 0.39
TRAF1-201ENST00000373887 NOL10Q9BSC4 688 aaKnown RBP17.51■□□□□ 0.39
TRAF1-201ENST00000373887 TCEAL9Q9UHQ7 104 aa17.51■□□□□ 0.39
TRAF1-201ENST00000373887 PHLDB1Q86UU1 1377 aa17.51■□□□□ 0.39
TRAF1-201ENST00000373887 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
TRAF1-201ENST00000373887 ZKSCAN2Q63HK3 967 aa17.49■□□□□ 0.39
TRAF1-201ENST00000373887 RBM42Q9BTD8 480 aaKnown RBP17.49■□□□□ 0.39
TRAF1-201ENST00000373887 CFAP70Q5T0N1 1121 aa17.49■□□□□ 0.39
TRAF1-201ENST00000373887 CTDP1Q9Y5B0 961 aaPredicted RBP17.49■□□□□ 0.39
TRAF1-201ENST00000373887 RSPH6AQ9H0K4 717 aa17.48■□□□□ 0.39
TRAF1-201ENST00000373887 FYB1O15117 783 aa17.48■□□□□ 0.39
TRAF1-201ENST00000373887 XPCQ01831 940 aaPredicted RBP17.48■□□□□ 0.39
TRAF1-201ENST00000373887 MRC2Q9UBG0 1479 aa17.47■□□□□ 0.39
TRAF1-201ENST00000373887 FGD6Q6ZV73 1430 aa17.47■□□□□ 0.39
TRAF1-201ENST00000373887 RBM33Q96EV2 1170 aaKnown RBP17.47■□□□□ 0.39
TRAF1-201ENST00000373887 RIC3Q7Z5B4 369 aa17.47■□□□□ 0.39
TRAF1-201ENST00000373887 E9PSI1 815 aa17.46■□□□□ 0.39
TRAF1-201ENST00000373887 DHX16O60231 1041 aaKnown RBP17.46■□□□□ 0.39
TRAF1-201ENST00000373887 RRP12Q5JTH9 1297 aaKnown RBP17.46■□□□□ 0.39
TRAF1-201ENST00000373887 PRAM1Q96QH2 718 aa17.46■□□□□ 0.39
TRAF1-201ENST00000373887 CNKSR2Q8WXI2 1034 aa17.46■□□□□ 0.39
TRAF1-201ENST00000373887 ANKRD50Q9ULJ7 1429 aa17.46■□□□□ 0.39
TRAF1-201ENST00000373887 CRBNQ96SW2 442 aa17.46■□□□□ 0.39
TRAF1-201ENST00000373887 DDX58O95786 925 aaKnown RBP17.45■□□□□ 0.38
TRAF1-201ENST00000373887 SYNJ2O15056 1496 aa17.45■□□□□ 0.38
TRAF1-201ENST00000373887 GPRASP1Q5JY77 1395 aa17.45■□□□□ 0.38
TRAF1-201ENST00000373887 HOMER1Q86YM7 354 aa17.45■□□□□ 0.38
TRAF1-201ENST00000373887 SLC26A8Q96RN1 970 aa17.45■□□□□ 0.38
TRAF1-201ENST00000373887 IFIT2P09913 472 aaKnown RBP17.45■□□□□ 0.38
TRAF1-201ENST00000373887 FOSBP53539 338 aa17.44■□□□□ 0.38
TRAF1-201ENST00000373887 FAM13BQ9NYF5 915 aa17.44■□□□□ 0.38
TRAF1-201ENST00000373887 SYNE3Q6ZMZ3 975 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms