RNA–Protein interactions for RNA: ENST00000373826.3

RAB42-201, Transcript of RAB42, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB42, Length 1,950 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42-201ENST00000373826 NBPF1Q3BBV0 1214 aa17.2■□□□□ 0.34
RAB42-201ENST00000373826 EIF2AK4Q9P2K8 1649 aaKnown RBP17.2■□□□□ 0.34
RAB42-201ENST00000373826 SLFN5Q08AF3 891 aa17.19■□□□□ 0.34
RAB42-201ENST00000373826 TRMT2AQ8IZ69 625 aaKnown RBP17.19■□□□□ 0.34
RAB42-201ENST00000373826 USP19O94966 1318 aa17.19■□□□□ 0.34
RAB42-201ENST00000373826 PLXNC1O60486 1568 aa17.19■□□□□ 0.34
RAB42-201ENST00000373826 IQGAP3Q86VI3 1631 aa17.19■□□□□ 0.34
RAB42-201ENST00000373826 TTC37Q6PGP7 1564 aa17.18■□□□□ 0.34
RAB42-201ENST00000373826 VIRMAQ69YN4 1812 aaKnown RBP17.18■□□□□ 0.34
RAB42-201ENST00000373826 A2MP01023 1474 aa17.18■□□□□ 0.34
RAB42-201ENST00000373826 MAPK8IP3Q9UPT6 1336 aa17.17■□□□□ 0.34
RAB42-201ENST00000373826 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.17■□□□□ 0.34
RAB42-201ENST00000373826 POGKQ9P215 609 aa17.17■□□□□ 0.34
RAB42-201ENST00000373826 PPP2R1AP30153 589 aa17.16■□□□□ 0.34
RAB42-201ENST00000373826 ARHGAP5Q13017 1502 aa17.16■□□□□ 0.34
RAB42-201ENST00000373826 MYO5CQ9NQX4 1742 aa17.15■□□□□ 0.34
RAB42-201ENST00000373826 SHROOM2Q13796 1616 aa17.15■□□□□ 0.34
RAB42-201ENST00000373826 NKTRP30414 1462 aaKnown RBP17.14■□□□□ 0.33
RAB42-201ENST00000373826 NINLQ9Y2I6 1382 aa17.14■□□□□ 0.33
RAB42-201ENST00000373826 PIK3C2GO75747 1445 aa17.14■□□□□ 0.33
RAB42-201ENST00000373826 ATP10AO60312 1499 aa17.13■□□□□ 0.33
RAB42-201ENST00000373826 MAGI2Q86UL8 1455 aa17.13■□□□□ 0.33
RAB42-201ENST00000373826 RRAGDQ9NQL2 400 aaPredicted RBP17.13■□□□□ 0.33
RAB42-201ENST00000373826 CGNL1Q0VF96 1302 aa17.13■□□□□ 0.33
RAB42-201ENST00000373826 CHD1O14646 1710 aa17.13■□□□□ 0.33
RAB42-201ENST00000373826 ZMYM3Q14202 1370 aa17.12■□□□□ 0.33
RAB42-201ENST00000373826 KNSTRNQ9Y448 316 aa17.12■□□□□ 0.33
RAB42-201ENST00000373826 WDR7Q9Y4E6 1490 aa17.12■□□□□ 0.33
RAB42-201ENST00000373826 ABCC2Q92887 1545 aa17.12■□□□□ 0.33
RAB42-201ENST00000373826 DUOX2Q9NRD8 1548 aa17.12■□□□□ 0.33
RAB42-201ENST00000373826 PDE3AQ14432 1141 aa17.11■□□□□ 0.33
RAB42-201ENST00000373826 ANTXR1Q9H6X2 564 aa17.11■□□□□ 0.33
RAB42-201ENST00000373826 NLRP1Q9C000 1473 aa17.1■□□□□ 0.33
RAB42-201ENST00000373826 RGL3Q3MIN7 710 aa17.1■□□□□ 0.33
RAB42-201ENST00000373826 NGEFQ8N5V2 710 aa17.1■□□□□ 0.33
RAB42-201ENST00000373826 E9PSI1 815 aa17.09■□□□□ 0.33
RAB42-201ENST00000373826 IGHDP01880 384 aa17.09■□□□□ 0.33
RAB42-201ENST00000373826 AMER1Q5JTC6 1135 aaPredicted RBP17.09■□□□□ 0.33
RAB42-201ENST00000373826 NPC1L1Q9UHC9 1359 aa17.09■□□□□ 0.33
RAB42-201ENST00000373826 RNF17Q9BXT8 1623 aaKnown RBP17.09■□□□□ 0.33
RAB42-201ENST00000373826 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.324e-8■□□□□ 8.4
RAB42-201ENST00000373826 GLIPR1L2Q4G1C9 344 aa17.07■□□□□ 0.32
RAB42-201ENST00000373826 SYNMO15061 1565 aa17.07■□□□□ 0.32
RAB42-201ENST00000373826 ASXL1Q8IXJ9 1541 aa17.07■□□□□ 0.32
RAB42-201ENST00000373826 AAMPQ13685 434 aa17.06■□□□□ 0.32
RAB42-201ENST00000373826 CDCA8Q53HL2 280 aa17.06■□□□□ 0.32
RAB42-201ENST00000373826 FSD2A1L4K1 749 aa17.06■□□□□ 0.32
RAB42-201ENST00000373826 BCAR3O75815 825 aa17.06■□□□□ 0.32
RAB42-201ENST00000373826 SEC24BO95487 1268 aa17.06■□□□□ 0.32
RAB42-201ENST00000373826 CLUAP1Q96AJ1 413 aa17.06■□□□□ 0.32
RAB42-201ENST00000373826 UPF2Q9HAU5 1272 aaKnown RBP17.06■□□□□ 0.32
RAB42-201ENST00000373826 SLKQ9H2G2 1235 aaPredicted RBP17.05■□□□□ 0.32
RAB42-201ENST00000373826 GOLGA6L3A6NEY3 463 aa17.04■□□□□ 0.32
RAB42-201ENST00000373826 TBC1D32Q96NH3 1257 aa17.04■□□□□ 0.32
RAB42-201ENST00000373826 ERCC6L2Q5T890 1561 aa17.03■□□□□ 0.32
RAB42-201ENST00000373826 CLCN1P35523 988 aa17.03■□□□□ 0.32
RAB42-201ENST00000373826 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
RAB42-201ENST00000373826 PLCH2O75038 1416 aa17.03■□□□□ 0.32
RAB42-201ENST00000373826 XRCC6P12956 609 aaKnown RBP eCLIP17.02■□□□□ 0.31
RAB42-201ENST00000373826 APAF1O14727 1248 aa17.01■□□□□ 0.31
RAB42-201ENST00000373826 PMFBP1Q8TBY8 1022 aa17.01■□□□□ 0.31
RAB42-201ENST00000373826 PNNQ9H307 717 aaKnown RBP17■□□□□ 0.31
RAB42-201ENST00000373826 CENPJQ9HC77 1338 aaPredicted RBP17■□□□□ 0.31
RAB42-201ENST00000373826 ABCC1P33527 1531 aa17■□□□□ 0.31
RAB42-201ENST00000373826 CCDC146Q8IYE0 955 aa17■□□□□ 0.31
RAB42-201ENST00000373826 TBC1D2Q9BYX2 928 aa17■□□□□ 0.31
RAB42-201ENST00000373826 IQGAP1P46940 1657 aa17■□□□□ 0.31
RAB42-201ENST00000373826 MADDQ8WXG6 1647 aa16.99■□□□□ 0.31
RAB42-201ENST00000373826 MCM4P33991 863 aa16.99■□□□□ 0.31
RAB42-201ENST00000373826 ZCCHC11Q5TAX3 1644 aaKnown RBP16.98■□□□□ 0.31
RAB42-201ENST00000373826 SCAPERQ9BY12 1400 aa16.97■□□□□ 0.31
RAB42-201ENST00000373826 CANXP27824 592 aaKnown RBP16.97■□□□□ 0.31
RAB42-201ENST00000373826 EFCAB2Q5VUJ9 269 aa16.97■□□□□ 0.31
RAB42-201ENST00000373826 NAP1L5Q96NT1 182 aaPredicted RBP16.97■□□□□ 0.31
RAB42-201ENST00000373826 RRP9O43818 475 aaKnown RBP16.96■□□□□ 0.31
RAB42-201ENST00000373826 COG6Q9Y2V7 657 aa16.96■□□□□ 0.31
RAB42-201ENST00000373826 UHRF1BP1LA0JNW5 1464 aa16.96■□□□□ 0.31
RAB42-201ENST00000373826 SPHKAPQ2M3C7 1700 aa16.95■□□□□ 0.3
RAB42-201ENST00000373826 TRPM2O94759 1503 aa16.95■□□□□ 0.3
RAB42-201ENST00000373826 SCAF11Q99590 1463 aaKnown RBP16.95■□□□□ 0.3
RAB42-201ENST00000373826 TRAPPC8Q9Y2L5 1435 aa16.95■□□□□ 0.3
RAB42-201ENST00000373826 MRE11P49959 708 aa16.95■□□□□ 0.3
RAB42-201ENST00000373826 PANK1Q8TE04 598 aa16.95■□□□□ 0.3
RAB42-201ENST00000373826 ISY1Q9ULR0 285 aaKnown RBP16.95■□□□□ 0.3
RAB42-201ENST00000373826 CEP152O94986 1710 aa16.95■□□□□ 0.3
RAB42-201ENST00000373826 CHMP5Q9NZZ3 219 aa16.95■□□□□ 0.3
RAB42-201ENST00000373826 HSP90AA1P07900 732 aaKnown RBP16.94■□□□□ 0.3
RAB42-201ENST00000373826 PKNOX2Q96KN3 472 aa16.94■□□□□ 0.3
RAB42-201ENST00000373826 STAC3Q96MF2 364 aa16.94■□□□□ 0.3
RAB42-201ENST00000373826 RTEL1-TNFRSF6BF6WH68 1400 aa16.93■□□□□ 0.3
RAB42-201ENST00000373826 PTPRTO14522 1441 aa16.93■□□□□ 0.3
RAB42-201ENST00000373826 DMRT2Q9Y5R5 561 aa16.92■□□□□ 0.3
RAB42-201ENST00000373826 MYOM1P52179 1685 aa16.92■□□□□ 0.3
RAB42-201ENST00000373826 DEPDC5O75140 1603 aa16.92■□□□□ 0.3
RAB42-201ENST00000373826 TRAK2O60296 914 aa16.91■□□□□ 0.3
RAB42-201ENST00000373826 RWDD1Q9H446 243 aaPredicted RBP16.91■□□□□ 0.3
RAB42-201ENST00000373826 PDZRN3Q9UPQ7 1066 aa16.91■□□□□ 0.3
RAB42-201ENST00000373826 ARAP3Q8WWN8 1544 aa16.91■□□□□ 0.3
RAB42-201ENST00000373826 HSP90AA2PQ14568 343 aaPredicted RBP16.91■□□□□ 0.3
RAB42-201ENST00000373826 WWC1Q8IX03 1113 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms