RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 SLC4A3P48751 1232 aa10.05□□□□□ -0.8
HERC4-202ENST00000373700 PLCH2O75038 1416 aa10.04□□□□□ -0.8
HERC4-202ENST00000373700 TCERG1O14776 1098 aaKnown RBP10.04□□□□□ -0.8
HERC4-202ENST00000373700 DEKP35659 375 aaKnown RBP10.04□□□□□ -0.8
HERC4-202ENST00000373700 ERCC6L2Q5T890 1561 aa10.04□□□□□ -0.8
HERC4-202ENST00000373700 WAPLQ7Z5K2 1190 aa10.03□□□□□ -0.8
HERC4-202ENST00000373700 DDRGK1Q96HY6 314 aa10.03□□□□□ -0.8
HERC4-202ENST00000373700 PDE3BQ13370 1112 aa10.02□□□□□ -0.8
HERC4-202ENST00000373700 EIF5BO60841 1220 aaKnown RBP10.02□□□□□ -0.81
HERC4-202ENST00000373700 MTHFSP49914 203 aa10.02□□□□□ -0.81
HERC4-202ENST00000373700 KDM6BO15054 1643 aa10.02□□□□□ -0.81
HERC4-202ENST00000373700 TCOF1Q13428 1488 aaKnown RBP10.02□□□□□ -0.81
HERC4-202ENST00000373700 CGNL1Q0VF96 1302 aa10.01□□□□□ -0.81
HERC4-202ENST00000373700 HMOX1P09601 288 aa10.01□□□□□ -0.81
HERC4-202ENST00000373700 PMFBP1Q8TBY8 1022 aa10.01□□□□□ -0.81
HERC4-202ENST00000373700 PDE4AP27815 886 aa10.01□□□□□ -0.81
HERC4-202ENST00000373700 PPP2R1AP30153 589 aa10.01□□□□□ -0.81
HERC4-202ENST00000373700 SKAP1Q86WV1 359 aa10.01□□□□□ -0.81
HERC4-202ENST00000373700 IPO9Q96P70 1041 aaKnown RBP10.01□□□□□ -0.81
HERC4-202ENST00000373700 COG6Q9Y2V7 657 aa10.01□□□□□ -0.81
HERC4-202ENST00000373700 MYH16Q9H6N6 1097 aa10□□□□□ -0.81
HERC4-202ENST00000373700 CABP1Q9NZU7 370 aa10□□□□□ -0.81
HERC4-202ENST00000373700 APBB1O00213 710 aa10□□□□□ -0.81
HERC4-202ENST00000373700 CFAP65Q6ZU64 1925 aaKnown RBP9.99□□□□□ -0.81
HERC4-202ENST00000373700 FBLN1P23142 703 aa9.99□□□□□ -0.81
HERC4-202ENST00000373700 PZPP20742 1482 aa9.99□□□□□ -0.81
HERC4-202ENST00000373700 WDR7Q9Y4E6 1490 aa9.99□□□□□ -0.81
HERC4-202ENST00000373700 BECN1Q14457 450 aa9.99□□□□□ -0.81
HERC4-202ENST00000373700 SLKQ9H2G2 1235 aaPredicted RBP9.99□□□□□ -0.81
HERC4-202ENST00000373700 DHX29Q7Z478 1369 aaKnown RBP9.98□□□□□ -0.81
HERC4-202ENST00000373700 DISP3Q9P2K9 1392 aa9.98□□□□□ -0.81
HERC4-202ENST00000373700 ITPRIPQ8IWB1 547 aa9.98□□□□□ -0.81
HERC4-202ENST00000373700 ABCC2Q92887 1545 aa9.97□□□□□ -0.81
HERC4-202ENST00000373700 AMPHP49418 695 aa9.97□□□□□ -0.81
HERC4-202ENST00000373700 SMC4Q9NTJ3 1288 aa9.97□□□□□ -0.81
HERC4-202ENST00000373700 SLC52A1Q9NWF4 448 aa9.97□□□□□ -0.81
HERC4-202ENST00000373700 CDK19Q9BWU1 502 aa9.97□□□□□ -0.81
HERC4-202ENST00000373700 NOS1P29475 1434 aa9.96□□□□□ -0.81
HERC4-202ENST00000373700 COG3Q96JB2 828 aa9.96□□□□□ -0.82
HERC4-202ENST00000373700 BRD4O60885 1362 aaPredicted RBP9.96□□□□□ -0.82
HERC4-202ENST00000373700 TPRNQ4KMQ1 711 aa9.96□□□□□ -0.82
HERC4-202ENST00000373700 DENND4BO75064 1496 aaPredicted RBP9.95□□□□□ -0.82
HERC4-202ENST00000373700 FAM135AQ9P2D6 1515 aa9.95□□□□□ -0.82
HERC4-202ENST00000373700 KDM5BQ9UGL1 1544 aa9.95□□□□□ -0.82
HERC4-202ENST00000373700 ITSN2Q9NZM3 1697 aa9.95□□□□□ -0.82
HERC4-202ENST00000373700 PANK1Q8TE04 598 aa9.94□□□□□ -0.82
HERC4-202ENST00000373700 DNMT1P26358 1616 aaKnown RBP9.94□□□□□ -0.82
HERC4-202ENST00000373700 CHD1O14646 1710 aa9.94□□□□□ -0.82
HERC4-202ENST00000373700 FANCIQ9NVI1 1328 aa9.94□□□□□ -0.82
HERC4-202ENST00000373700 TCP11L2Q8N4U5 519 aa9.93□□□□□ -0.82
HERC4-202ENST00000373700 RTF1Q92541 710 aaKnown RBP9.93□□□□□ -0.82
HERC4-202ENST00000373700 NECTIN2Q92692 538 aa9.93□□□□□ -0.82
HERC4-202ENST00000373700 DIAPH1O60610 1272 aaKnown RBP9.93□□□□□ -0.82
HERC4-202ENST00000373700 BCAR3O75815 825 aa9.93□□□□□ -0.82
HERC4-202ENST00000373700 XPCQ01831 940 aaPredicted RBP9.93□□□□□ -0.82
HERC4-202ENST00000373700 CSB-PGBD3P0DP91 1061 aa9.92□□□□□ -0.82
HERC4-202ENST00000373700 RIPK4P57078 832 aa9.92□□□□□ -0.82
HERC4-202ENST00000373700 STAC3Q96MF2 364 aa9.92□□□□□ -0.82
HERC4-202ENST00000373700 RRS1Q15050 365 aaKnown RBP9.92□□□□□ -0.82
HERC4-202ENST00000373700 E9PSI1 815 aa9.92□□□□□ -0.82
HERC4-202ENST00000373700 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.92□□□□□ -0.825e-7■□□□□ 10.2
HERC4-202ENST00000373700 MSH5O43196 834 aa9.91□□□□□ -0.82
HERC4-202ENST00000373700 ABCC10Q5T3U5 1492 aa9.91□□□□□ -0.82
HERC4-202ENST00000373700 A2MP01023 1474 aa9.91□□□□□ -0.82
HERC4-202ENST00000373700 MBD5Q9P267 1494 aa9.91□□□□□ -0.82
HERC4-202ENST00000373700 ABCA8O94911 1581 aa9.91□□□□□ -0.82
HERC4-202ENST00000373700 MFAP1P55081 439 aaKnown RBP9.91□□□□□ -0.82
HERC4-202ENST00000373700 C20orf194Q5TEA3 1177 aa9.91□□□□□ -0.82
HERC4-202ENST00000373700 TESK2Q96S53 571 aa9.91□□□□□ -0.82
HERC4-202ENST00000373700 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.9□□□□□ -0.82
HERC4-202ENST00000373700 TSR2Q969E8 191 aaKnown RBP9.9□□□□□ -0.82
HERC4-202ENST00000373700 RWDD1Q9H446 243 aaPredicted RBP9.9□□□□□ -0.82
HERC4-202ENST00000373700 NLRP6P59044 892 aa9.9□□□□□ -0.82
HERC4-202ENST00000373700 SLC4A10Q6U841 1118 aa9.9□□□□□ -0.82
HERC4-202ENST00000373700 PNNQ9H307 717 aaKnown RBP9.9□□□□□ -0.82
HERC4-202ENST00000373700 NCLP19338 710 aaKnown RBP9.9□□□□□ -0.82
HERC4-202ENST00000373700 CENPQQ7L2Z9 268 aaPredicted RBP9.89□□□□□ -0.83
HERC4-202ENST00000373700 GZF1Q9H116 711 aaPredicted RBP9.89□□□□□ -0.83
HERC4-202ENST00000373700 NSD3Q9BZ95 1437 aa9.89□□□□□ -0.83
HERC4-202ENST00000373700 NCKAP5LQ9HCH0 1330 aa9.89□□□□□ -0.83
HERC4-202ENST00000373700 DUOX2Q9NRD8 1548 aa9.89□□□□□ -0.83
HERC4-202ENST00000373700 MS4A1P11836 297 aa9.89□□□□□ -0.83
HERC4-202ENST00000373700 PSME1Q06323 249 aa9.89□□□□□ -0.83
HERC4-202ENST00000373700 ZNF330Q9Y3S2 320 aaPredicted RBP9.89□□□□□ -0.83
HERC4-202ENST00000373700 PRAG1Q86YV5 1406 aa9.89□□□□□ -0.83
HERC4-202ENST00000373700 ZNF428Q96B54 188 aa9.88□□□□□ -0.83
HERC4-202ENST00000373700 TTC37Q6PGP7 1564 aa9.88□□□□□ -0.83
HERC4-202ENST00000373700 PRKAR2BP31323 418 aa9.88□□□□□ -0.83
HERC4-202ENST00000373700 RUNDC1Q96C34 613 aa9.88□□□□□ -0.83
HERC4-202ENST00000373700 THUMPD2Q9BTF0 503 aaKnown RBP9.88□□□□□ -0.83
HERC4-202ENST00000373700 IPO8O15397 1037 aaKnown RBP9.88□□□□□ -0.83
HERC4-202ENST00000373700 C14orf93Q9H972 538 aaKnown RBP9.88□□□□□ -0.83
HERC4-202ENST00000373700 SMG6Q86US8 1419 aaKnown RBP9.87□□□□□ -0.83
HERC4-202ENST00000373700 ZNF518AQ6AHZ1 1483 aa9.87□□□□□ -0.83
HERC4-202ENST00000373700 ESCO1Q5FWF5 840 aa9.87□□□□□ -0.83
HERC4-202ENST00000373700 FAM161AQ3B820 660 aa9.87□□□□□ -0.83
HERC4-202ENST00000373700 NME9Q86XW9 330 aa9.87□□□□□ -0.83
HERC4-202ENST00000373700 FOXD4L1Q9NU39 408 aa9.87□□□□□ -0.83
HERC4-202ENST00000373700 HSP90AB1P08238 724 aaKnown RBP9.87□□□□□ -0.83
HERC4-202ENST00000373700 TEX14Q8IWB6 1497 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms