RNA–Protein interactions for RNA: ENST00000373040.4

RPA4-201, Transcript of replication protein A4, humanhuman

APPRIS P1 BASIC

Gene RPA4, Length 1,560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA4-201ENST00000373040 STAC3Q96MF2 364 aa15.57■□□□□ 0.08
RPA4-201ENST00000373040 TMEM2Q9UHN6 1383 aa15.55■□□□□ 0.08
RPA4-201ENST00000373040 HDGFP51858 240 aaKnown RBP15.55■□□□□ 0.08
RPA4-201ENST00000373040 NUTM2DQ5VT03 806 aaPredicted RBP15.55■□□□□ 0.08
RPA4-201ENST00000373040 PPLO60437 1756 aa15.55■□□□□ 0.08
RPA4-201ENST00000373040 IFT172Q9UG01 1749 aa15.55■□□□□ 0.08
RPA4-201ENST00000373040 RIMS2Q9UQ26 1411 aa15.54■□□□□ 0.08
RPA4-201ENST00000373040 VGFO15240 615 aaPredicted RBP15.54■□□□□ 0.08
RPA4-201ENST00000373040 NEXMIFQ5QGS0 1516 aa15.54■□□□□ 0.08
RPA4-201ENST00000373040 TXNDC2Q86VQ3 553 aa15.53■□□□□ 0.08
RPA4-201ENST00000373040 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.53■□□□□ 0.08
RPA4-201ENST00000373040 ADGRF5Q8IZF2 1346 aa15.53■□□□□ 0.08
RPA4-201ENST00000373040 ZFYVE9O95405 1425 aa15.52■□□□□ 0.08
RPA4-201ENST00000373040 ARHGAP23Q9P227 1491 aa15.52■□□□□ 0.08
RPA4-201ENST00000373040 SLIT1O75093 1534 aa15.52■□□□□ 0.07
RPA4-201ENST00000373040 NBPF8Q3BBV2 869 aa15.52■□□□□ 0.07
RPA4-201ENST00000373040 LTKP29376 864 aa15.51■□□□□ 0.07
RPA4-201ENST00000373040 EID1Q9Y6B2 187 aa15.51■□□□□ 0.07
RPA4-201ENST00000373040 MYOM2P54296 1465 aa15.5■□□□□ 0.07
RPA4-201ENST00000373040 ANKLE2Q86XL3 938 aa15.49■□□□□ 0.07
RPA4-201ENST00000373040 LMTK3Q96Q04 1460 aa15.49■□□□□ 0.07
RPA4-201ENST00000373040 PRAG1Q86YV5 1406 aa15.48■□□□□ 0.07
RPA4-201ENST00000373040 HSPA2P54652 639 aa15.48■□□□□ 0.07
RPA4-201ENST00000373040 NRXN1Q9ULB1 1477 aa15.47■□□□□ 0.07
RPA4-201ENST00000373040 SENP3Q9H4L4 574 aaPredicted RBP15.47■□□□□ 0.07
RPA4-201ENST00000373040 SCAF11Q99590 1463 aaKnown RBP15.45■□□□□ 0.06
RPA4-201ENST00000373040 NCKAP5LQ9HCH0 1330 aa15.45■□□□□ 0.06
RPA4-201ENST00000373040 CFAP70Q5T0N1 1121 aa15.45■□□□□ 0.06
RPA4-201ENST00000373040 BCANQ96GW7 911 aa15.45■□□□□ 0.06
RPA4-201ENST00000373040 C14orf93Q9H972 538 aaKnown RBP15.45■□□□□ 0.06
RPA4-201ENST00000373040 PIK3C2GO75747 1445 aa15.44■□□□□ 0.06
RPA4-201ENST00000373040 PLEKHG1Q9ULL1 1385 aa15.43■□□□□ 0.06
RPA4-201ENST00000373040 NBPF1Q3BBV0 1214 aa15.42■□□□□ 0.06
RPA4-201ENST00000373040 TRPM1Q7Z4N2 1603 aa15.42■□□□□ 0.06
RPA4-201ENST00000373040 POLR1AO95602 1720 aaPredicted RBP15.41■□□□□ 0.06
RPA4-201ENST00000373040 KIAA1210Q9ULL0 1709 aa15.4■□□□□ 0.06
RPA4-201ENST00000373040 SETBP1Q9Y6X0 1596 aa15.4■□□□□ 0.06
RPA4-201ENST00000373040 ALKQ9UM73 1620 aa15.4■□□□□ 0.06
RPA4-201ENST00000373040 NRXN3Q9Y4C0 1643 aa15.4■□□□□ 0.06
RPA4-201ENST00000373040 MED14O60244 1454 aa15.39■□□□□ 0.05
RPA4-201ENST00000373040 TMEM132EQ6IEE7 984 aa15.39■□□□□ 0.05
RPA4-201ENST00000373040 SLC26A8Q96RN1 970 aa15.39■□□□□ 0.05
RPA4-201ENST00000373040 TBX22Q9Y458 520 aa15.39■□□□□ 0.05
RPA4-201ENST00000373040 RALGAPBQ86X10 1494 aa15.39■□□□□ 0.05
RPA4-201ENST00000373040 IQGAP1P46940 1657 aa15.39■□□□□ 0.05
RPA4-201ENST00000373040 NPHP4O75161 1426 aaPredicted RBP15.38■□□□□ 0.05
RPA4-201ENST00000373040 ADAMTS13Q76LX8 1427 aa15.38■□□□□ 0.05
RPA4-201ENST00000373040 ROCK2O75116 1388 aaKnown RBP15.38■□□□□ 0.05
RPA4-201ENST00000373040 STRCQ7RTU9 1775 aa15.37■□□□□ 0.05
RPA4-201ENST00000373040 LAMC1P11047 1609 aa15.37■□□□□ 0.05
RPA4-201ENST00000373040 CARD11Q9BXL7 1154 aa15.36■□□□□ 0.05
RPA4-201ENST00000373040 SETD1AO15047 1707 aaKnown RBP15.35■□□□□ 0.05
RPA4-201ENST00000373040 GPRASP1Q5JY77 1395 aa15.35■□□□□ 0.05
RPA4-201ENST00000373040 METP08581 1390 aa15.34■□□□□ 0.05
RPA4-201ENST00000373040 ADGRB1O14514 1584 aa15.33■□□□□ 0.05
RPA4-201ENST00000373040 DIP2AQ14689 1571 aa15.33■□□□□ 0.04
RPA4-201ENST00000373040 ASXL1Q8IXJ9 1541 aa15.32■□□□□ 0.04
RPA4-201ENST00000373040 STK26Q9P289 416 aa15.32■□□□□ 0.04
RPA4-201ENST00000373040 DMRT2Q9Y5R5 561 aa15.31■□□□□ 0.04
RPA4-201ENST00000373040 YTHDC2Q9H6S0 1430 aaKnown RBP15.3■□□□□ 0.04
RPA4-201ENST00000373040 TRAK1Q9UPV9 953 aa15.3■□□□□ 0.04
RPA4-201ENST00000373040 EIF4G2P78344 907 aaKnown RBP eCLIP15.29■□□□□ 0.04
RPA4-201ENST00000373040 AMOTL2Q9Y2J4 779 aa15.29■□□□□ 0.04
RPA4-201ENST00000373040 LRPPRCP42704 1394 aaKnown RBP15.29■□□□□ 0.04
RPA4-201ENST00000373040 PIK3R4Q99570 1358 aa15.29■□□□□ 0.04
RPA4-201ENST00000373040 ABCC11Q96J66 1382 aa15.28■□□□□ 0.04
RPA4-201ENST00000373040 PTPRUQ92729 1446 aa15.28■□□□□ 0.04
RPA4-201ENST00000373040 CHD2O14647 1828 aaKnown RBP15.28■□□□□ 0.04
RPA4-201ENST00000373040 HSPA5P11021 654 aaKnown RBP15.28■□□□□ 0.04
RPA4-201ENST00000373040 USP47Q96K76 1375 aa15.28■□□□□ 0.04
RPA4-201ENST00000373040 ST20-MTHFSA0A0A6YYL1 179 aa15.26■□□□□ 0.03
RPA4-201ENST00000373040 HIRIP3Q9BW71 556 aaPredicted RBP15.26■□□□□ 0.03
RPA4-201ENST00000373040 KCNA6P17658 529 aa15.25■□□□□ 0.03
RPA4-201ENST00000373040 SIRT1Q96EB6 747 aa15.25■□□□□ 0.03
RPA4-201ENST00000373040 PRAM1Q96QH2 718 aa15.24■□□□□ 0.03
RPA4-201ENST00000373040 TECPR2O15040 1411 aa15.23■□□□□ 0.03
RPA4-201ENST00000373040 EIF3AQ14152 1382 aaKnown RBP15.23■□□□□ 0.03
RPA4-201ENST00000373040 DLC1Q96QB1 1528 aa15.23■□□□□ 0.03
RPA4-201ENST00000373040 KNDC1Q76NI1 1749 aa15.23■□□□□ 0.03
RPA4-201ENST00000373040 ARHGEF28Q8N1W1 1705 aaKnown RBP15.23■□□□□ 0.03
RPA4-201ENST00000373040 WAPLQ7Z5K2 1190 aa15.23■□□□□ 0.03
RPA4-201ENST00000373040 POGKQ9P215 609 aa15.23■□□□□ 0.03
RPA4-201ENST00000373040 XRN1Q8IZH2 1706 aaKnown RBP15.22■□□□□ 0.03
RPA4-201ENST00000373040 CENPJQ9HC77 1338 aaPredicted RBP15.22■□□□□ 0.03
RPA4-201ENST00000373040 ROBO2Q9HCK4 1378 aa15.22■□□□□ 0.03
RPA4-201ENST00000373040 CPS1P31327 1500 aa15.21■□□□□ 0.03
RPA4-201ENST00000373040 FAM135BQ49AJ0 1406 aa15.2■□□□□ 0.02
RPA4-201ENST00000373040 SAFB2Q14151 953 aaKnown RBP eCLIP15.2■□□□□ 0.02
RPA4-201ENST00000373040 TESK2Q96S53 571 aa15.2■□□□□ 0.02
RPA4-201ENST00000373040 PLEKHH1Q9ULM0 1364 aa15.2■□□□□ 0.02
RPA4-201ENST00000373040 NWD1Q149M9 1564 aa15.2■□□□□ 0.02
RPA4-201ENST00000373040 STRCP1A6NGW2 1772 aa15.19■□□□□ 0.02
RPA4-201ENST00000373040 ZNF335Q9H4Z2 1342 aaPredicted RBP15.19■□□□□ 0.02
RPA4-201ENST00000373040 PROSER2Q86WR7 435 aaPredicted RBP15.19■□□□□ 0.02
RPA4-201ENST00000373040 PTCH1Q13635 1447 aa15.18■□□□□ 0.02
RPA4-201ENST00000373040 QRICH2Q9H0J4 1663 aa15.17■□□□□ 0.02
RPA4-201ENST00000373040 ZNF316A6NFI3 1004 aaPredicted RBP15.16■□□□□ 0.02
RPA4-201ENST00000373040 SLC24A1O60721 1099 aa15.16■□□□□ 0.02
RPA4-201ENST00000373040 MINK1Q8N4C8 1332 aaPredicted RBP15.16■□□□□ 0.02
RPA4-201ENST00000373040 NKTRP30414 1462 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms