RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 CNGB1Q14028 1251 aaPredicted RBP18.27■□□□□ 0.52
CSTF2-201ENST00000372972 MROH2AA6NES4 1674 aa18.26■□□□□ 0.51
CSTF2-201ENST00000372972 NEFLP07196 543 aa18.26■□□□□ 0.51
CSTF2-201ENST00000372972 RALBP1Q15311 655 aa18.26■□□□□ 0.51
CSTF2-201ENST00000372972 FKBP8Q14318 412 aa18.25■□□□□ 0.51
CSTF2-201ENST00000372972 DISP3Q9P2K9 1392 aa18.25■□□□□ 0.51
CSTF2-201ENST00000372972 PELP1Q8IZL8 1130 aaKnown RBP18.24■□□□□ 0.51
CSTF2-201ENST00000372972 SYNMO15061 1565 aa18.24■□□□□ 0.51
CSTF2-201ENST00000372972 ADGRB3O60242 1522 aa18.24■□□□□ 0.51
CSTF2-201ENST00000372972 CHGAP10645 457 aaKnown RBP18.23■□□□□ 0.51
CSTF2-201ENST00000372972 ZBED9Q6R2W3 1325 aa18.23■□□□□ 0.51
CSTF2-201ENST00000372972 TRHP20396 242 aaPredicted RBP18.22■□□□□ 0.51
CSTF2-201ENST00000372972 TMC1Q8TDI8 760 aa18.22■□□□□ 0.51
CSTF2-201ENST00000372972 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
CSTF2-201ENST00000372972 SCAF11Q99590 1463 aaKnown RBP18.21■□□□□ 0.51
CSTF2-201ENST00000372972 IFT172Q9UG01 1749 aa18.21■□□□□ 0.51
CSTF2-201ENST00000372972 PER1O15534 1290 aaPredicted RBP18.21■□□□□ 0.51
CSTF2-201ENST00000372972 PIK3C2BO00750 1634 aa18.21■□□□□ 0.51
CSTF2-201ENST00000372972 MYBBP1AQ9BQG0 1328 aaKnown RBP18.21■□□□□ 0.51
CSTF2-201ENST00000372972 MYOM2P54296 1465 aa18.2■□□□□ 0.5
CSTF2-201ENST00000372972 MLECQ14165 292 aa18.2■□□□□ 0.5
CSTF2-201ENST00000372972 IQGAP1P46940 1657 aa18.2■□□□□ 0.5
CSTF2-201ENST00000372972 PNISRQ8TF01 805 aaKnown RBP18.19■□□□□ 0.5
CSTF2-201ENST00000372972 PREX1Q8TCU6 1659 aa18.19■□□□□ 0.5
CSTF2-201ENST00000372972 KIAA1210Q9ULL0 1709 aa18.19■□□□□ 0.5
CSTF2-201ENST00000372972 BRD4O60885 1362 aaPredicted RBP18.19■□□□□ 0.5
CSTF2-201ENST00000372972 ADGRF5Q8IZF2 1346 aa18.18■□□□□ 0.5
CSTF2-201ENST00000372972 CLTCQ00610 1675 aaKnown RBP18.18■□□□□ 0.5
CSTF2-201ENST00000372972 DNAJC5Q9H3Z4 198 aa18.17■□□□□ 0.5
CSTF2-201ENST00000372972 CDCA8Q53HL2 280 aa18.17■□□□□ 0.5
CSTF2-201ENST00000372972 FBXO31Q5XUX0 539 aaPredicted RBP18.17■□□□□ 0.5
CSTF2-201ENST00000372972 PANK3Q9H999 370 aa18.17■□□□□ 0.5
CSTF2-201ENST00000372972 EIF3AQ14152 1382 aaKnown RBP18.16■□□□□ 0.5
CSTF2-201ENST00000372972 IDI1Q13907 227 aa18.16■□□□□ 0.5
CSTF2-201ENST00000372972 PARD3Q8TEW0 1356 aa18.16■□□□□ 0.5
CSTF2-201ENST00000372972 CFAP70Q5T0N1 1121 aa18.15■□□□□ 0.5
CSTF2-201ENST00000372972 SLC52A1Q9NWF4 448 aa18.15■□□□□ 0.5
CSTF2-201ENST00000372972 PPLO60437 1756 aa18.15■□□□□ 0.5
CSTF2-201ENST00000372972 NRXN1Q9ULB1 1477 aa18.15■□□□□ 0.5
CSTF2-201ENST00000372972 ERVK-7P63135 1459 aa18.14■□□□□ 0.49
CSTF2-201ENST00000372972 SLC24A1O60721 1099 aa18.14■□□□□ 0.49
CSTF2-201ENST00000372972 RPGRIP1LQ68CZ1 1315 aa18.14■□□□□ 0.49
CSTF2-201ENST00000372972 NLRP13Q86W25 1043 aa18.13■□□□□ 0.49
CSTF2-201ENST00000372972 BCANQ96GW7 911 aa18.12■□□□□ 0.49
CSTF2-201ENST00000372972 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
CSTF2-201ENST00000372972 ESF1Q9H501 851 aaKnown RBP18.09■□□□□ 0.49
CSTF2-201ENST00000372972 TMEM131LA2VDJ0 1609 aa18.09■□□□□ 0.49
CSTF2-201ENST00000372972 NEXMIFQ5QGS0 1516 aa18.09■□□□□ 0.49
CSTF2-201ENST00000372972 CC2D1BQ5T0F9 858 aaKnown RBP18.08■□□□□ 0.49
CSTF2-201ENST00000372972 MYO5BQ9ULV0 1848 aa18.08■□□□□ 0.49
CSTF2-201ENST00000372972 PIK3C2GO75747 1445 aa18.08■□□□□ 0.48
CSTF2-201ENST00000372972 SPATA31D1Q6ZQQ2 1576 aa18.08■□□□□ 0.48
CSTF2-201ENST00000372972 NUTM2DQ5VT03 806 aaPredicted RBP18.06■□□□□ 0.48
CSTF2-201ENST00000372972 ZMYM3Q14202 1370 aa18.06■□□□□ 0.48
CSTF2-201ENST00000372972 VGFO15240 615 aaPredicted RBP18.06■□□□□ 0.48
CSTF2-201ENST00000372972 C14orf93Q9H972 538 aaKnown RBP18.06■□□□□ 0.48
CSTF2-201ENST00000372972 KNSTRNQ9Y448 316 aa18.06■□□□□ 0.48
CSTF2-201ENST00000372972 SETBP1Q9Y6X0 1596 aa18.05■□□□□ 0.48
CSTF2-201ENST00000372972 SMG6Q86US8 1419 aaKnown RBP18.03■□□□□ 0.48
CSTF2-201ENST00000372972 ERICH6BQ5W0A0 696 aa18.03■□□□□ 0.48
CSTF2-201ENST00000372972 ZFYVE9O95405 1425 aa18.02■□□□□ 0.47
CSTF2-201ENST00000372972 SBNO2Q9Y2G9 1366 aa18.01■□□□□ 0.47
CSTF2-201ENST00000372972 STAG3Q9UJ98 1225 aa18.01■□□□□ 0.47
CSTF2-201ENST00000372972 ADGRB1O14514 1584 aa18■□□□□ 0.47
CSTF2-201ENST00000372972 AMER1Q5JTC6 1135 aaPredicted RBP18■□□□□ 0.47
CSTF2-201ENST00000372972 NUDCQ9Y266 331 aa18■□□□□ 0.47
CSTF2-201ENST00000372972 KDM5AP29375 1690 aaKnown RBP18■□□□□ 0.47
CSTF2-201ENST00000372972 CENPJQ9HC77 1338 aaPredicted RBP17.99■□□□□ 0.47
CSTF2-201ENST00000372972 MYO3AQ8NEV4 1616 aa17.99■□□□□ 0.47
CSTF2-201ENST00000372972 TMEM132EQ6IEE7 984 aa17.99■□□□□ 0.47
CSTF2-201ENST00000372972 A2ML1A8K2U0 1454 aa17.98■□□□□ 0.47
CSTF2-201ENST00000372972 IRX6P78412 446 aaPredicted RBP17.98■□□□□ 0.47
CSTF2-201ENST00000372972 INSRP06213 1382 aa17.98■□□□□ 0.47
CSTF2-201ENST00000372972 NPC1L1Q9UHC9 1359 aa17.98■□□□□ 0.47
CSTF2-201ENST00000372972 TRAK1Q9UPV9 953 aa17.97■□□□□ 0.47
CSTF2-201ENST00000372972 ASXL1Q8IXJ9 1541 aa17.97■□□□□ 0.47
CSTF2-201ENST00000372972 MYOM1P52179 1685 aa17.97■□□□□ 0.47
CSTF2-201ENST00000372972 TNRQ92752 1358 aa17.95■□□□□ 0.46
CSTF2-201ENST00000372972 SENP3Q9H4L4 574 aaPredicted RBP17.95■□□□□ 0.46
CSTF2-201ENST00000372972 PPP2R1AP30153 589 aa17.94■□□□□ 0.46
CSTF2-201ENST00000372972 SENP3-EIF4A1A0A087X0R7 540 aa17.93■□□□□ 0.46
CSTF2-201ENST00000372972 RIMS2Q9UQ26 1411 aa17.92■□□□□ 0.46
CSTF2-201ENST00000372972 CEBPAP49715 358 aaPredicted RBP17.91■□□□□ 0.46
CSTF2-201ENST00000372972 PPP4R2Q9NY27 417 aa17.91■□□□□ 0.46
CSTF2-201ENST00000372972 FER1L4A9Z1Z3 1794 aa17.9■□□□□ 0.46
CSTF2-201ENST00000372972 PDE3BQ13370 1112 aa17.9■□□□□ 0.46
CSTF2-201ENST00000372972 CARD14Q9BXL6 1004 aa17.9■□□□□ 0.46
CSTF2-201ENST00000372972 TSHZ2Q9NRE2 1034 aa17.9■□□□□ 0.46
CSTF2-201ENST00000372972 BLMP54132 1417 aaPredicted RBP17.89■□□□□ 0.46
CSTF2-201ENST00000372972 RNF123Q5XPI4 1314 aa17.89■□□□□ 0.45
CSTF2-201ENST00000372972 C3P01024 1663 aa17.89■□□□□ 0.45
CSTF2-201ENST00000372972 QRICH2Q9H0J4 1663 aa17.88■□□□□ 0.45
CSTF2-201ENST00000372972 ALKQ9UM73 1620 aa17.88■□□□□ 0.45
CSTF2-201ENST00000372972 PUS7Q96PZ0 661 aaKnown RBP17.88■□□□□ 0.45
CSTF2-201ENST00000372972 ARHGEF28Q8N1W1 1705 aaKnown RBP17.87■□□□□ 0.45
CSTF2-201ENST00000372972 ADAMTS8Q9UP79 889 aa17.86■□□□□ 0.45
CSTF2-201ENST00000372972 SALL2Q9Y467 1007 aaPredicted RBP17.86■□□□□ 0.45
CSTF2-201ENST00000372972 WDR43Q15061 677 aaKnown RBP eCLIP17.86■□□□□ 0.45
CSTF2-201ENST00000372972 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.86■□□□□ 0.45
CSTF2-201ENST00000372972 STK26Q9P289 416 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms