RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 PANK3Q9H999 370 aa13.87□□□□□ -0.19
SYNPO2L-201ENST00000372873 DIAPH3Q9NSV4 1193 aa13.87□□□□□ -0.19
SYNPO2L-201ENST00000372873 PDZRN3Q9UPQ7 1066 aa13.87□□□□□ -0.19
SYNPO2L-201ENST00000372873 NUP155O75694 1391 aa13.86□□□□□ -0.19
SYNPO2L-201ENST00000372873 VGLL3A8MV65 326 aa13.86□□□□□ -0.19
SYNPO2L-201ENST00000372873 BCAR3O75815 825 aa13.86□□□□□ -0.19
SYNPO2L-201ENST00000372873 EFCAB5A4FU69 1503 aa13.86□□□□□ -0.19
SYNPO2L-201ENST00000372873 PDCL2Q8N4E4 241 aa13.86□□□□□ -0.19
SYNPO2L-201ENST00000372873 KIF3AQ9Y496 699 aa13.86□□□□□ -0.19
SYNPO2L-201ENST00000372873 SPDYE4A6NLX3 237 aa13.85□□□□□ -0.19
SYNPO2L-201ENST00000372873 E9PSI1 815 aa13.85□□□□□ -0.19
SYNPO2L-201ENST00000372873 APPP05067 770 aa13.85□□□□□ -0.19
SYNPO2L-201ENST00000372873 CDCA8Q53HL2 280 aa13.85□□□□□ -0.19
SYNPO2L-201ENST00000372873 PPP4R3BQ5MIZ7 849 aa13.85□□□□□ -0.19
SYNPO2L-201ENST00000372873 AEBP1Q8IUX7 1158 aa13.85□□□□□ -0.19
SYNPO2L-201ENST00000372873 IGSF3O75054 1194 aa13.84□□□□□ -0.19
SYNPO2L-201ENST00000372873 GOLGA6L6A8MZA4 724 aa13.84□□□□□ -0.19
SYNPO2L-201ENST00000372873 PHF14O94880 888 aa13.84□□□□□ -0.19
SYNPO2L-201ENST00000372873 CHMP4AQ9BY43 222 aa13.84□□□□□ -0.19
SYNPO2L-201ENST00000372873 TNPO1Q92973 898 aaKnown RBP13.83□□□□□ -0.19
SYNPO2L-201ENST00000372873 CCDC94Q9BW85 323 aaPredicted RBP13.83□□□□□ -0.2
SYNPO2L-201ENST00000372873 CARMIL2Q6F5E8 1435 aa13.83□□□□□ -0.2
SYNPO2L-201ENST00000372873 PRPF40AO75400 957 aaKnown RBP13.83□□□□□ -0.2
SYNPO2L-201ENST00000372873 NUCB2P80303 420 aa13.83□□□□□ -0.2
SYNPO2L-201ENST00000372873 URB2Q14146 1524 aaKnown RBP13.83□□□□□ -0.2
SYNPO2L-201ENST00000372873 LETM1O95202 739 aaPredicted RBP13.83□□□□□ -0.2
SYNPO2L-201ENST00000372873 HFM1A2PYH4 1435 aa13.82□□□□□ -0.2
SYNPO2L-201ENST00000372873 NCOA1Q15788 1441 aa13.82□□□□□ -0.2
SYNPO2L-201ENST00000372873 SEC24BO95487 1268 aa13.82□□□□□ -0.2
SYNPO2L-201ENST00000372873 ZNF592Q92610 1267 aa13.82□□□□□ -0.2
SYNPO2L-201ENST00000372873 TAF7LQ5H9L4 462 aa13.81□□□□□ -0.2
SYNPO2L-201ENST00000372873 NAIPQ13075 1403 aa13.81□□□□□ -0.2
SYNPO2L-201ENST00000372873 KCNJ4P48050 445 aa13.81□□□□□ -0.2
SYNPO2L-201ENST00000372873 GTPBP4Q9BZE4 634 aaKnown RBP13.81□□□□□ -0.2
SYNPO2L-201ENST00000372873 TBC1D32Q96NH3 1257 aa13.81□□□□□ -0.2
SYNPO2L-201ENST00000372873 ANKRD30AQ9BXX3 1397 aa13.81□□□□□ -0.2
SYNPO2L-201ENST00000372873 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
SYNPO2L-201ENST00000372873 PAXIP1Q6ZW49 1069 aaPredicted RBP13.8□□□□□ -0.2
SYNPO2L-201ENST00000372873 CIZ1Q9ULV3 898 aaPredicted RBP13.8□□□□□ -0.2
SYNPO2L-201ENST00000372873 U2SURPO15042 1029 aaKnown RBP13.8□□□□□ -0.2
SYNPO2L-201ENST00000372873 CFAP53Q96M91 514 aa13.8□□□□□ -0.2
SYNPO2L-201ENST00000372873 ST18O60284 1047 aa13.8□□□□□ -0.2
SYNPO2L-201ENST00000372873 SMC4Q9NTJ3 1288 aa13.8□□□□□ -0.2
SYNPO2L-201ENST00000372873 EIF3AQ14152 1382 aaKnown RBP13.8□□□□□ -0.2
SYNPO2L-201ENST00000372873 ERICH4A6NGS2 130 aa13.79□□□□□ -0.2
SYNPO2L-201ENST00000372873 KIF20AO95235 890 aa13.79□□□□□ -0.2
SYNPO2L-201ENST00000372873 NOL8Q76FK4 1167 aaKnown RBP13.79□□□□□ -0.2
SYNPO2L-201ENST00000372873 RRP7AQ9Y3A4 280 aaKnown RBP13.79□□□□□ -0.2
SYNPO2L-201ENST00000372873 PTPRKQ15262 1439 aa13.79□□□□□ -0.2
SYNPO2L-201ENST00000372873 CDK13Q14004 1512 aaKnown RBP13.78□□□□□ -0.2
SYNPO2L-201ENST00000372873 GOLGA6L4A6NEF3 574 aa13.78□□□□□ -0.2
SYNPO2L-201ENST00000372873 PDE3AQ14432 1141 aa13.78□□□□□ -0.2
SYNPO2L-201ENST00000372873 FSD2A1L4K1 749 aa13.77□□□□□ -0.2
SYNPO2L-201ENST00000372873 TRERF1Q96PN7 1200 aa13.77□□□□□ -0.2
SYNPO2L-201ENST00000372873 LNPKQ9C0E8 428 aa13.77□□□□□ -0.2
SYNPO2L-201ENST00000372873 PRDM2Q13029 1718 aa13.77□□□□□ -0.2
SYNPO2L-201ENST00000372873 IGHDP01880 384 aa13.77□□□□□ -0.21
SYNPO2L-201ENST00000372873 APBB1O00213 710 aa13.77□□□□□ -0.21
SYNPO2L-201ENST00000372873 GRIN2BQ13224 1484 aa13.77□□□□□ -0.21
SYNPO2L-201ENST00000372873 ANKRD45Q5TZF3 282 aa13.76□□□□□ -0.21
SYNPO2L-201ENST00000372873 CFAP44Q96MT7 982 aa13.76□□□□□ -0.21
SYNPO2L-201ENST00000372873 TERF1P54274 439 aa13.76□□□□□ -0.21
SYNPO2L-201ENST00000372873 KIF16BQ96L93 1317 aa13.76□□□□□ -0.21
SYNPO2L-201ENST00000372873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.75□□□□□ -0.21
SYNPO2L-201ENST00000372873 ZKSCAN5Q9Y2L8 839 aa13.75□□□□□ -0.21
SYNPO2L-201ENST00000372873 HTATSF1O43719 755 aaKnown RBP13.75□□□□□ -0.21
SYNPO2L-201ENST00000372873 MCM5P33992 734 aa13.75□□□□□ -0.21
SYNPO2L-201ENST00000372873 ZKSCAN2Q63HK3 967 aa13.75□□□□□ -0.21
SYNPO2L-201ENST00000372873 IPO8O15397 1037 aaKnown RBP13.74□□□□□ -0.21
SYNPO2L-201ENST00000372873 SYCE3A1L190 88 aa13.74□□□□□ -0.21
SYNPO2L-201ENST00000372873 IFT57Q9NWB7 429 aa13.74□□□□□ -0.21
SYNPO2L-201ENST00000372873 K7ELQ4 463 aaPredicted RBP13.74□□□□□ -0.21
SYNPO2L-201ENST00000372873 NRDCO43847 1150 aa13.74□□□□□ -0.21
SYNPO2L-201ENST00000372873 SSFA2P28290 1259 aa13.74□□□□□ -0.21
SYNPO2L-201ENST00000372873 ERBB4Q15303 1308 aa13.74□□□□□ -0.21
SYNPO2L-201ENST00000372873 EHBP1L1Q8N3D4 1523 aa13.74□□□□□ -0.21
SYNPO2L-201ENST00000372873 TSPY26PQ9H489 355 aa13.73□□□□□ -0.21
SYNPO2L-201ENST00000372873 PRG4Q92954 1404 aaPredicted RBP13.73□□□□□ -0.21
SYNPO2L-201ENST00000372873 ZRSR1Q15695 479 aaKnown RBP13.73□□□□□ -0.21
SYNPO2L-201ENST00000372873 CUL7Q14999 1698 aa13.72□□□□□ -0.21
SYNPO2L-201ENST00000372873 EPRSP07814 1512 aaKnown RBP13.72□□□□□ -0.21
SYNPO2L-201ENST00000372873 TEX35Q5T0J7 233 aa13.72□□□□□ -0.21
SYNPO2L-201ENST00000372873 LAMC3Q9Y6N6 1575 aa13.72□□□□□ -0.21
SYNPO2L-201ENST00000372873 MBD3O95983 291 aa13.71□□□□□ -0.21
SYNPO2L-201ENST00000372873 NBPF1Q3BBV0 1214 aa13.71□□□□□ -0.21
SYNPO2L-201ENST00000372873 DZIP1LQ8IYY4 767 aaKnown RBP13.71□□□□□ -0.21
SYNPO2L-201ENST00000372873 FAM177BA6PVY3 158 aa13.71□□□□□ -0.21
SYNPO2L-201ENST00000372873 MCCP23508 829 aa13.71□□□□□ -0.21
SYNPO2L-201ENST00000372873 KLHL40Q2TBA0 621 aa13.71□□□□□ -0.21
SYNPO2L-201ENST00000372873 DMTNQ08495 405 aa13.71□□□□□ -0.21
SYNPO2L-201ENST00000372873 PRIMPOLQ96LW4 560 aa13.71□□□□□ -0.22
SYNPO2L-201ENST00000372873 KDM2BQ8NHM5 1336 aa13.7□□□□□ -0.22
SYNPO2L-201ENST00000372873 IRX3P78415 501 aaPredicted RBP13.7□□□□□ -0.22
SYNPO2L-201ENST00000372873 GOLGA6L1Q8N7Z2 621 aa13.7□□□□□ -0.22
SYNPO2L-201ENST00000372873 NOL7Q9UMY1 257 aaKnown RBP13.7□□□□□ -0.22
SYNPO2L-201ENST00000372873 HS1BP3Q53T59 392 aa13.7□□□□□ -0.22
SYNPO2L-201ENST00000372873 SUPT6HQ7KZ85 1726 aaKnown RBP13.7□□□□□ -0.22
SYNPO2L-201ENST00000372873 NPM1P06748 294 aaKnown RBP eCLIP13.7□□□□□ -0.22
SYNPO2L-201ENST00000372873 DUSP27Q5VZP5 1158 aa13.7□□□□□ -0.22
SYNPO2L-201ENST00000372873 GAS2L3Q86XJ1 694 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms