RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 PPP2R1AP30153 589 aa20.44■□□□□ 0.86
PABPC4-202ENST00000372857 FAM135AQ9P2D6 1515 aa20.44■□□□□ 0.86
PABPC4-202ENST00000372857 SPINK5Q9NQ38 1064 aaPredicted RBP20.43■□□□□ 0.86
PABPC4-202ENST00000372857 SENP3Q9H4L4 574 aaPredicted RBP20.43■□□□□ 0.86
PABPC4-202ENST00000372857 RRAGDQ9NQL2 400 aaPredicted RBP20.43■□□□□ 0.86
PABPC4-202ENST00000372857 ZNF521Q96K83 1311 aa20.43■□□□□ 0.86
PABPC4-202ENST00000372857 SLFN5Q08AF3 891 aa20.42■□□□□ 0.86
PABPC4-202ENST00000372857 TTC37Q6PGP7 1564 aa20.42■□□□□ 0.86
PABPC4-202ENST00000372857 KNSTRNQ9Y448 316 aa20.41■□□□□ 0.86
PABPC4-202ENST00000372857 SHANK2Q9UPX8 1470 aa20.4■□□□□ 0.86
PABPC4-202ENST00000372857 GPRASP1Q5JY77 1395 aa20.4■□□□□ 0.86
PABPC4-202ENST00000372857 A2MP01023 1474 aa20.4■□□□□ 0.86
PABPC4-202ENST00000372857 CDC42BPBQ9Y5S2 1711 aa20.39■□□□□ 0.85
PABPC4-202ENST00000372857 PLA2R1Q13018 1463 aa20.38■□□□□ 0.85
PABPC4-202ENST00000372857 CHD1O14646 1710 aa20.38■□□□□ 0.85
PABPC4-202ENST00000372857 PRDM15P57071 1507 aaPredicted RBP20.38■□□□□ 0.85
PABPC4-202ENST00000372857 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.38■□□□□ 0.851e-9■■■□□ 16.1
PABPC4-202ENST00000372857 MAGI2Q86UL8 1455 aa20.37■□□□□ 0.85
PABPC4-202ENST00000372857 APAF1O14727 1248 aa20.37■□□□□ 0.85
PABPC4-202ENST00000372857 BECN1Q14457 450 aa20.37■□□□□ 0.85
PABPC4-202ENST00000372857 EIF3AQ14152 1382 aaKnown RBP20.36■□□□□ 0.85
PABPC4-202ENST00000372857 EFCAB2Q5VUJ9 269 aa20.36■□□□□ 0.85
PABPC4-202ENST00000372857 PODXL2Q9NZ53 605 aa20.35■□□□□ 0.85
PABPC4-202ENST00000372857 RSPH4AQ5TD94 716 aa20.35■□□□□ 0.85
PABPC4-202ENST00000372857 TRAPPC8Q9Y2L5 1435 aa20.34■□□□□ 0.85
PABPC4-202ENST00000372857 COG6Q9Y2V7 657 aa20.33■□□□□ 0.85
PABPC4-202ENST00000372857 DMRT2Q9Y5R5 561 aa20.33■□□□□ 0.85
PABPC4-202ENST00000372857 AMER1Q5JTC6 1135 aaPredicted RBP20.33■□□□□ 0.84
PABPC4-202ENST00000372857 SPRYD3Q8NCJ5 442 aa20.33■□□□□ 0.84
PABPC4-202ENST00000372857 PANK1Q8TE04 598 aa20.33■□□□□ 0.84
PABPC4-202ENST00000372857 VIRMAQ69YN4 1812 aaKnown RBP20.32■□□□□ 0.84
PABPC4-202ENST00000372857 L1TD1Q5T7N2 865 aaKnown RBP20.32■□□□□ 0.84
PABPC4-202ENST00000372857 CANXP27824 592 aaKnown RBP20.32■□□□□ 0.84
PABPC4-202ENST00000372857 TRMT2AQ8IZ69 625 aaKnown RBP20.32■□□□□ 0.84
PABPC4-202ENST00000372857 NKTRP30414 1462 aaKnown RBP20.32■□□□□ 0.84
PABPC4-202ENST00000372857 SPAG9O60271 1321 aaKnown RBP20.31■□□□□ 0.84
PABPC4-202ENST00000372857 WDR7Q9Y4E6 1490 aa20.3■□□□□ 0.84
PABPC4-202ENST00000372857 GZF1Q9H116 711 aaPredicted RBP20.3■□□□□ 0.84
PABPC4-202ENST00000372857 PREX2Q70Z35 1606 aa20.3■□□□□ 0.84
PABPC4-202ENST00000372857 ANTXR1Q9H6X2 564 aa20.29■□□□□ 0.84
PABPC4-202ENST00000372857 KIF3BO15066 747 aa20.29■□□□□ 0.84
PABPC4-202ENST00000372857 CLUAP1Q96AJ1 413 aa20.29■□□□□ 0.84
PABPC4-202ENST00000372857 ARHGEF5Q12774 1597 aa20.28■□□□□ 0.84
PABPC4-202ENST00000372857 MAPK8IP3Q9UPT6 1336 aa20.28■□□□□ 0.84
PABPC4-202ENST00000372857 MYO5CQ9NQX4 1742 aa20.28■□□□□ 0.84
PABPC4-202ENST00000372857 CHGAP10645 457 aaKnown RBP20.27■□□□□ 0.84
PABPC4-202ENST00000372857 LAMC1P11047 1609 aa20.27■□□□□ 0.84
PABPC4-202ENST00000372857 PANK2Q9BZ23 570 aa20.27■□□□□ 0.83
PABPC4-202ENST00000372857 CGNL1Q0VF96 1302 aa20.26■□□□□ 0.83
PABPC4-202ENST00000372857 XRCC6P12956 609 aaKnown RBP eCLIP20.26■□□□□ 0.831e-9■□□□□ 8
PABPC4-202ENST00000372857 NLRP1Q9C000 1473 aa20.26■□□□□ 0.83
PABPC4-202ENST00000372857 E9PSI1 815 aa20.26■□□□□ 0.83
PABPC4-202ENST00000372857 NAP1L5Q96NT1 182 aaPredicted RBP20.26■□□□□ 0.83
PABPC4-202ENST00000372857 TBC1D2Q9BYX2 928 aa20.26■□□□□ 0.83
PABPC4-202ENST00000372857 ABCC2Q92887 1545 aa20.24■□□□□ 0.83
PABPC4-202ENST00000372857 GOLGA6L3A6NEY3 463 aa20.24■□□□□ 0.83
PABPC4-202ENST00000372857 UPF2Q9HAU5 1272 aaKnown RBP20.24■□□□□ 0.83
PABPC4-202ENST00000372857 CENPJQ9HC77 1338 aaPredicted RBP20.23■□□□□ 0.83
PABPC4-202ENST00000372857 CLASP1Q7Z460 1538 aa20.23■□□□□ 0.83
PABPC4-202ENST00000372857 PDE3AQ14432 1141 aa20.22■□□□□ 0.83
PABPC4-202ENST00000372857 EIF2AK4Q9P2K8 1649 aaKnown RBP20.22■□□□□ 0.83
PABPC4-202ENST00000372857 GLIPR1L2Q4G1C9 344 aa20.22■□□□□ 0.83
PABPC4-202ENST00000372857 TBC1D32Q96NH3 1257 aa20.21■□□□□ 0.83
PABPC4-202ENST00000372857 PLCH2O75038 1416 aa20.21■□□□□ 0.83
PABPC4-202ENST00000372857 PIK3C2GO75747 1445 aa20.2■□□□□ 0.82
PABPC4-202ENST00000372857 NEUROD2Q15784 382 aa20.2■□□□□ 0.82
PABPC4-202ENST00000372857 TNNQ9UQP3 1299 aa20.2■□□□□ 0.82
PABPC4-202ENST00000372857 PNNQ9H307 717 aaKnown RBP20.2■□□□□ 0.82
PABPC4-202ENST00000372857 ASXL1Q8IXJ9 1541 aa20.2■□□□□ 0.82
PABPC4-202ENST00000372857 NUTM2DQ5VT03 806 aaPredicted RBP20.19■□□□□ 0.82
PABPC4-202ENST00000372857 PCDHB15Q9Y5E8 787 aa20.19■□□□□ 0.82
PABPC4-202ENST00000372857 SCAPERQ9BY12 1400 aa20.18■□□□□ 0.82
PABPC4-202ENST00000372857 MCM4P33991 863 aa20.18■□□□□ 0.82
PABPC4-202ENST00000372857 CFAP70Q5T0N1 1121 aa20.18■□□□□ 0.82
PABPC4-202ENST00000372857 BCL2L13Q9BXK5 485 aa20.18■□□□□ 0.82
PABPC4-202ENST00000372857 PDZRN3Q9UPQ7 1066 aa20.18■□□□□ 0.82
PABPC4-202ENST00000372857 FSD2A1L4K1 749 aa20.16■□□□□ 0.82
PABPC4-202ENST00000372857 RLBP1P12271 317 aa20.16■□□□□ 0.82
PABPC4-202ENST00000372857 RRP7AQ9Y3A4 280 aaKnown RBP20.15■□□□□ 0.82
PABPC4-202ENST00000372857 CDCA8Q53HL2 280 aa20.14■□□□□ 0.82
PABPC4-202ENST00000372857 WWC1Q8IX03 1113 aa20.14■□□□□ 0.82
PABPC4-202ENST00000372857 TNNT2P45379 298 aaPredicted RBP20.13■□□□□ 0.81
PABPC4-202ENST00000372857 GGT6Q6P531 493 aa20.13■□□□□ 0.81
PABPC4-202ENST00000372857 VSIG10Q8N0Z9 540 aa20.13■□□□□ 0.81
PABPC4-202ENST00000372857 PMFBP1Q8TBY8 1022 aa20.13■□□□□ 0.81
PABPC4-202ENST00000372857 RNF17Q9BXT8 1623 aaKnown RBP20.13■□□□□ 0.81
PABPC4-202ENST00000372857 SYNMO15061 1565 aa20.13■□□□□ 0.81
PABPC4-202ENST00000372857 ZCCHC11Q5TAX3 1644 aaKnown RBP20.12■□□□□ 0.81
PABPC4-202ENST00000372857 CLCN1P35523 988 aa20.12■□□□□ 0.81
PABPC4-202ENST00000372857 DUOX2Q9NRD8 1548 aa20.12■□□□□ 0.81
PABPC4-202ENST00000372857 TRAK2O60296 914 aa20.12■□□□□ 0.81
PABPC4-202ENST00000372857 UNC13BO14795 1591 aa20.11■□□□□ 0.81
PABPC4-202ENST00000372857 MFAP1P55081 439 aaKnown RBP20.11■□□□□ 0.81
PABPC4-202ENST00000372857 RARSP54136 660 aaKnown RBP20.1■□□□□ 0.81
PABPC4-202ENST00000372857 ADGRF5Q8IZF2 1346 aa20.1■□□□□ 0.81
PABPC4-202ENST00000372857 NINLQ9Y2I6 1382 aa20.1■□□□□ 0.81
PABPC4-202ENST00000372857 HSP90AA1P07900 732 aaKnown RBP20.09■□□□□ 0.81
PABPC4-202ENST00000372857 HSP90AA2PQ14568 343 aaPredicted RBP20.08■□□□□ 0.81
PABPC4-202ENST00000372857 SHROOM2Q13796 1616 aa20.08■□□□□ 0.81
PABPC4-202ENST00000372857 UGGT1Q9NYU2 1555 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms